RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 TUBAL3A6NHL2 446 aa13.7□□□□□ -0.22
RABGGTA-219ENST00000560871 KPNA4O00629 521 aaPredicted RBP13.7□□□□□ -0.22
RABGGTA-219ENST00000560871 TRAF3IP2O43734 574 aaPredicted RBP13.7□□□□□ -0.22
RABGGTA-219ENST00000560871 PDE5AO76074 875 aa13.7□□□□□ -0.22
RABGGTA-219ENST00000560871 CNOT4O95628 575 aaKnown RBP13.7□□□□□ -0.22
RABGGTA-219ENST00000560871 MT-ND1P03886 318 aa13.7□□□□□ -0.22
RABGGTA-219ENST00000560871 COX5AP20674 150 aa13.7□□□□□ -0.22
RABGGTA-219ENST00000560871 YAP1P46937 504 aaKnown RBP13.7□□□□□ -0.22
RABGGTA-219ENST00000560871 VLDLRP98155 873 aa13.7□□□□□ -0.22
RABGGTA-219ENST00000560871 DAZAP2Q15038 168 aaPredicted RBP13.7□□□□□ -0.22
RABGGTA-219ENST00000560871 TMEM225Q6GV28 225 aa13.7□□□□□ -0.22
RABGGTA-219ENST00000560871 LCN8Q6JVE9 175 aa13.7□□□□□ -0.22
RABGGTA-219ENST00000560871 CASP12Q6UXS9 341 aa13.7□□□□□ -0.22
RABGGTA-219ENST00000560871 H1FNTQ75WM6 255 aaPredicted RBP13.7□□□□□ -0.22
RABGGTA-219ENST00000560871 KDM8Q8N371 416 aa13.7□□□□□ -0.22
RABGGTA-219ENST00000560871 PFN4Q8NHR9 129 aa13.7□□□□□ -0.22
RABGGTA-219ENST00000560871 TMEM239Q8WW34 195 aa13.7□□□□□ -0.22
RABGGTA-219ENST00000560871 APH1AQ96BI3 265 aa13.7□□□□□ -0.22
RABGGTA-219ENST00000560871 PYURFQ96I23 114 aa13.7□□□□□ -0.22
RABGGTA-219ENST00000560871 OR10A4Q9H209 315 aa13.7□□□□□ -0.22
RABGGTA-219ENST00000560871 MUC13Q9H3R2 512 aa13.7□□□□□ -0.22
RABGGTA-219ENST00000560871 FKRPQ9H9S5 495 aa13.7□□□□□ -0.22
RABGGTA-219ENST00000560871 NDUFAF4Q9P032 175 aa13.7□□□□□ -0.22
RABGGTA-219ENST00000560871 C6orf203Q9P0P8 240 aaPredicted RBP13.7□□□□□ -0.22
RABGGTA-219ENST00000560871 ACTR3BQ9P1U1 418 aa13.7□□□□□ -0.22
RABGGTA-219ENST00000560871 MALT1Q9UDY8 824 aa13.7□□□□□ -0.22
RABGGTA-219ENST00000560871 V9GYQ6 96 aa13.7□□□□□ -0.22
RABGGTA-219ENST00000560871 CSMD1Q96PZ7 3565 aa13.7□□□□□ -0.22
RABGGTA-219ENST00000560871 LOC102725191A0A1B0GVB3 256 aa13.69□□□□□ -0.22
RABGGTA-219ENST00000560871 SH3D21A4FU49 640 aa13.69□□□□□ -0.22
RABGGTA-219ENST00000560871 C16orf97H3BN30 126 aa13.69□□□□□ -0.22
RABGGTA-219ENST00000560871 PIP5K1CO60331 668 aa13.69□□□□□ -0.22
RABGGTA-219ENST00000560871 MRPL33O75394 65 aaKnown RBP13.69□□□□□ -0.22
RABGGTA-219ENST00000560871 HPRP00739 348 aa13.69□□□□□ -0.22
RABGGTA-219ENST00000560871 ASAH2BP0C7U1 165 aa13.69□□□□□ -0.22
RABGGTA-219ENST00000560871 LSM11P83369 360 aaKnown RBP eCLIP13.69□□□□□ -0.223e-9■□□□□ 10.4
RABGGTA-219ENST00000560871 DNAL1Q4LDG9 190 aa13.69□□□□□ -0.22
RABGGTA-219ENST00000560871 FBXW9Q5XUX1 488 aa13.69□□□□□ -0.22
RABGGTA-219ENST00000560871 C22orf34Q6ZV56 151 aa13.69□□□□□ -0.22
RABGGTA-219ENST00000560871 CXorf67Q86X51 503 aaPredicted RBP13.69□□□□□ -0.22
RABGGTA-219ENST00000560871 ZNF100Q8IYN0 542 aa13.69□□□□□ -0.22
RABGGTA-219ENST00000560871 PIK3C3Q8NEB9 887 aa13.69□□□□□ -0.22
RABGGTA-219ENST00000560871 OR5J2Q8NH18 312 aa13.69□□□□□ -0.22
RABGGTA-219ENST00000560871 CLPTM1LQ96KA5 538 aa13.69□□□□□ -0.22
RABGGTA-219ENST00000560871 DACH2Q96NX9 599 aa13.69□□□□□ -0.22
RABGGTA-219ENST00000560871 OXGR1Q96P68 337 aa13.69□□□□□ -0.22
RABGGTA-219ENST00000560871 ASPNQ9BXN1 380 aa13.69□□□□□ -0.22
RABGGTA-219ENST00000560871 POLDIP3Q9BY77 421 aaKnown RBP13.69□□□□□ -0.22
RABGGTA-219ENST00000560871 KLHL4Q9C0H6 718 aa13.69□□□□□ -0.22
RABGGTA-219ENST00000560871 RASSF1Q9NS23 344 aa13.69□□□□□ -0.22
RABGGTA-219ENST00000560871 C20orf141Q9NUB4 165 aa13.69□□□□□ -0.22
RABGGTA-219ENST00000560871 RHCGQ9UBD6 479 aa13.69□□□□□ -0.22
RABGGTA-219ENST00000560871 ZNF229Q9UJW7 825 aa13.69□□□□□ -0.22
RABGGTA-219ENST00000560871 ANKRD17O75179 2603 aaKnown RBP13.69□□□□□ -0.22
RABGGTA-219ENST00000560871 TCRBV5S2A0A599 114 aa13.68□□□□□ -0.22
RABGGTA-219ENST00000560871 A6NNC1 897 aa13.68□□□□□ -0.22
RABGGTA-219ENST00000560871 MS4A18H0YCH9 400 aa13.68□□□□□ -0.22
RABGGTA-219ENST00000560871 PDLIM1O00151 329 aa13.68□□□□□ -0.22
RABGGTA-219ENST00000560871 CH25HO95992 272 aa13.68□□□□□ -0.22
RABGGTA-219ENST00000560871 ADAP00813 363 aa13.68□□□□□ -0.22
RABGGTA-219ENST00000560871 EPXP11678 715 aa13.68□□□□□ -0.22
RABGGTA-219ENST00000560871 IGHV1-2P23083 117 aa13.68□□□□□ -0.22
RABGGTA-219ENST00000560871 IFNA8P32881 189 aa13.68□□□□□ -0.22
RABGGTA-219ENST00000560871 SELENOPP49908 381 aa13.68□□□□□ -0.22
RABGGTA-219ENST00000560871 MS4A2Q01362 244 aa13.68□□□□□ -0.22
RABGGTA-219ENST00000560871 PUDPQ08623 228 aa13.68□□□□□ -0.22
RABGGTA-219ENST00000560871 BNIP1Q12981 228 aa13.68□□□□□ -0.22
RABGGTA-219ENST00000560871 TRIM25Q14258 630 aaKnown RBP13.68□□□□□ -0.22
RABGGTA-219ENST00000560871 TRAM2Q15035 370 aa13.68□□□□□ -0.22
RABGGTA-219ENST00000560871 P2RY6Q15077 328 aa13.68□□□□□ -0.22
RABGGTA-219ENST00000560871 MS4A18Q3C1V0 323 aa13.68□□□□□ -0.22
RABGGTA-219ENST00000560871 MTX3Q5HYI7 312 aa13.68□□□□□ -0.22
RABGGTA-219ENST00000560871 SFRP5Q5T4F7 317 aa13.68□□□□□ -0.22
RABGGTA-219ENST00000560871 TSPO2Q5TGU0 170 aa13.68□□□□□ -0.22
RABGGTA-219ENST00000560871 NHLRC1Q6VVB1 395 aa13.68□□□□□ -0.22
RABGGTA-219ENST00000560871 AAED1Q7RTV5 226 aa13.68□□□□□ -0.22
RABGGTA-219ENST00000560871 C10orf53Q8N6V4 93 aa13.68□□□□□ -0.22
RABGGTA-219ENST00000560871 LIPHQ8WWY8 451 aa13.68□□□□□ -0.22
RABGGTA-219ENST00000560871 ASB9Q96DX5 294 aa13.68□□□□□ -0.22
RABGGTA-219ENST00000560871 HS6ST2Q96MM7 605 aa13.68□□□□□ -0.22
RABGGTA-219ENST00000560871 NANSQ9NR45 359 aa13.68□□□□□ -0.22
RABGGTA-219ENST00000560871 PARPBPQ9NWS1 579 aa13.68□□□□□ -0.22
RABGGTA-219ENST00000560871 RCE1Q9Y256 329 aa13.68□□□□□ -0.22
RABGGTA-219ENST00000560871 GPR52Q9Y2T5 361 aa13.68□□□□□ -0.22
RABGGTA-219ENST00000560871 MED31Q9Y3C7 131 aa13.68□□□□□ -0.22
RABGGTA-219ENST00000560871 HRNRQ86YZ3 2850 aaPredicted RBP13.68□□□□□ -0.22
RABGGTA-219ENST00000560871 POLQO75417 2590 aa13.67□□□□□ -0.22
RABGGTA-219ENST00000560871 A0A087WUU8 490 aa13.67□□□□□ -0.22
RABGGTA-219ENST00000560871 hCG_2039718K7EN88 272 aa13.67□□□□□ -0.22
RABGGTA-219ENST00000560871 PLPP3O14495 311 aa13.67□□□□□ -0.22
RABGGTA-219ENST00000560871 ZNF432O94892 652 aa13.67□□□□□ -0.22
RABGGTA-219ENST00000560871 IGHV3-9P01782 118 aa13.67□□□□□ -0.22
RABGGTA-219ENST00000560871 THBDP07204 575 aa13.67□□□□□ -0.22
RABGGTA-219ENST00000560871 TSPAN19P0C672 248 aa13.67□□□□□ -0.22
RABGGTA-219ENST00000560871 HLA-DOBP13765 273 aa13.67□□□□□ -0.22
RABGGTA-219ENST00000560871 NQO1P15559 274 aaKnown RBP13.67□□□□□ -0.22
RABGGTA-219ENST00000560871 ZNF43P17038 809 aa13.67□□□□□ -0.22
RABGGTA-219ENST00000560871 RHCEP18577 417 aa13.67□□□□□ -0.22
RABGGTA-219ENST00000560871 DNAJA1P31689 397 aaKnown RBP13.67□□□□□ -0.22
RABGGTA-219ENST00000560871 FOXG1P55316 489 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms