RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 GYPBP06028 91 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 SPI1P17947 270 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 IDUAP35475 653 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 CDKN2AP42771 156 aaKnown RBP11.66□□□□□ -0.54
SNX1-211ENST00000560829 SERPINB10P48595 397 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 SLC16A1P53985 500 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 Q0VFX4 171 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 PON3Q15166 354 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 STPG1Q5TH74 334 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 LIPKQ5VXJ0 399 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 TMPRSS11AQ6ZMR5 421 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 EXD3Q8N9H8 876 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 WDSUB1Q8N9V3 476 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 MFSD8Q8NHS3 518 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 POC1BQ8TC44 478 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 SPRYD4Q8WW59 207 aaPredicted RBP11.66□□□□□ -0.54
SNX1-211ENST00000560829 UFD1Q92890 307 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 PRRX2Q99811 253 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 ALG8Q9BVK2 526 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 OR11A1Q9GZK7 315 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 P4HTMQ9NXG6 502 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 GRHPRQ9UBQ7 328 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 VDAC3Q9Y277 283 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 SF3B6Q9Y3B4 125 aaKnown RBP11.66□□□□□ -0.54
SNX1-211ENST00000560829 CORINQ9Y5Q5 1042 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 PMF1-BGLAPU3KQ54 211 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 DAPL1A0PJW8 107 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 ANKRD33BA6NCL7 494 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 LALBAP00709 142 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 IGHMP01871 453 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 F8A1P23610 371 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 ADH6P28332 368 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 GRPRP30550 384 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 CAPZA2P47755 286 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 ZP4Q12836 540 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 KRR1Q13601 381 aaKnown RBP11.66□□□□□ -0.54
SNX1-211ENST00000560829 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.66□□□□□ -0.541e-6■□□□□ 10.6
SNX1-211ENST00000560829 SOWAHCQ53LP3 525 aaPredicted RBP11.66□□□□□ -0.54
SNX1-211ENST00000560829 MESTQ5EB52 335 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 LINC01590Q5TEZ4 76 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 LEG1Q6P5S2 330 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 JAZF1Q86VZ6 243 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 SCAIQ8N9R8 606 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 ZPLD1Q8TCW7 415 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 SMPDL3BQ92485 455 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 SLC25A36Q96CQ1 311 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 DDIT4LQ96D03 193 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 C1GALT1C1Q96EU7 318 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 SGCZQ96LD1 299 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 SNX18Q96RF0 628 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 SIAEQ9HAT2 523 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 INIPQ9NRY2 104 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 ASB6Q9NWX5 421 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 MOKQ9UQ07 419 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 NOX1Q9Y5S8 564 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 A3GALT2U3KPV4 340 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 CACNA1HO95180 2353 aa11.65□□□□□ -0.54
SNX1-211ENST00000560829 EXPH5Q8NEV8 1989 aa11.65□□□□□ -0.54
SNX1-211ENST00000560829 A0A087WZY1 265 aa11.65□□□□□ -0.54
SNX1-211ENST00000560829 PLPP3O14495 311 aa11.65□□□□□ -0.54
SNX1-211ENST00000560829 RAD1O60671 282 aa11.65□□□□□ -0.54
SNX1-211ENST00000560829 GLCEO94923 617 aa11.65□□□□□ -0.54
SNX1-211ENST00000560829 TNFSF15O95150 251 aa11.65□□□□□ -0.54
SNX1-211ENST00000560829 OR2T7P0C7T2 308 aa11.65□□□□□ -0.54
SNX1-211ENST00000560829 GABRA5P31644 462 aa11.65□□□□□ -0.54
SNX1-211ENST00000560829 DLSTP36957 453 aa11.65□□□□□ -0.54
SNX1-211ENST00000560829 RPS3AP61247 264 aaKnown RBP11.65□□□□□ -0.54
SNX1-211ENST00000560829 ZNF85Q03923 595 aa11.65□□□□□ -0.54
SNX1-211ENST00000560829 DBPQ10586 325 aaPredicted RBP11.65□□□□□ -0.54
SNX1-211ENST00000560829 GPR50Q13585 617 aa11.65□□□□□ -0.54
SNX1-211ENST00000560829 INPP5JQ15735 1006 aaPredicted RBP11.65□□□□□ -0.54
SNX1-211ENST00000560829 SLC6A19Q695T7 634 aa11.65□□□□□ -0.54
SNX1-211ENST00000560829 CD200R1LQ6Q8B3 271 aa11.65□□□□□ -0.54
SNX1-211ENST00000560829 PLCZ1Q86YW0 608 aa11.65□□□□□ -0.54
SNX1-211ENST00000560829 TMEM156Q8N614 296 aa11.65□□□□□ -0.54
SNX1-211ENST00000560829 OR10H4Q8NGA5 316 aa11.65□□□□□ -0.54
SNX1-211ENST00000560829 OR2T27Q8NH04 317 aa11.65□□□□□ -0.54
SNX1-211ENST00000560829 ZNRF4Q8WWF5 429 aa11.65□□□□□ -0.54
SNX1-211ENST00000560829 ZMYND19Q96E35 227 aaPredicted RBP11.65□□□□□ -0.54
SNX1-211ENST00000560829 CNN2Q99439 309 aaKnown RBP11.65□□□□□ -0.54
SNX1-211ENST00000560829 RNF167Q9H6Y7 350 aa11.65□□□□□ -0.54
SNX1-211ENST00000560829 PTGES2Q9H7Z7 377 aa11.65□□□□□ -0.54
SNX1-211ENST00000560829 PROK2Q9HC23 129 aa11.65□□□□□ -0.54
SNX1-211ENST00000560829 HPF1Q9NWY4 346 aa11.65□□□□□ -0.54
SNX1-211ENST00000560829 BABAM2Q9NXR7 383 aa11.65□□□□□ -0.54
SNX1-211ENST00000560829 CCDC59Q9P031 241 aaKnown RBP11.65□□□□□ -0.54
SNX1-211ENST00000560829 FBXL2Q9UKC9 423 aa11.65□□□□□ -0.54
SNX1-211ENST00000560829 ZNF346Q9UL40 294 aaKnown RBP11.65□□□□□ -0.54
SNX1-211ENST00000560829 PCDHGB7Q9Y5F8 929 aa11.65□□□□□ -0.54
SNX1-211ENST00000560829 NPIPB13A6NJU9 1138 aa11.64□□□□□ -0.55
SNX1-211ENST00000560829 NPIPB4C9JG80 1138 aa11.64□□□□□ -0.55
SNX1-211ENST00000560829 FAM47E-STBD1D6RA91 191 aa11.64□□□□□ -0.55
SNX1-211ENST00000560829 SNPHO15079 494 aa11.64□□□□□ -0.55
SNX1-211ENST00000560829 EFNA2O43921 213 aa11.64□□□□□ -0.55
SNX1-211ENST00000560829 TFP02787 698 aa11.64□□□□□ -0.55
SNX1-211ENST00000560829 MRPL3P09001 348 aaKnown RBP11.64□□□□□ -0.55
SNX1-211ENST00000560829 CCL3P10147 92 aa11.64□□□□□ -0.55
SNX1-211ENST00000560829 FKBP2P26885 142 aaKnown RBP11.64□□□□□ -0.55
SNX1-211ENST00000560829 EIF1P41567 113 aaKnown RBP11.64□□□□□ -0.55
SNX1-211ENST00000560829 PRAMEF20Q5VT98 475 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms