RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 B3GALT5Q9Y2C3 310 aa12.46□□□□□ -0.41
PKNOX1-209ENST00000560448 ICE1Q9Y2F5 2266 aa12.46□□□□□ -0.42
PKNOX1-209ENST00000560448 A1L4Q6 167 aa12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 FTCDNL1E5RQL4 147 aa12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 CGAP01215 116 aa12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 LYNP07948 512 aa12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 CDSNQ15517 529 aa12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 OR7A5Q15622 319 aa12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 IQCCQ4KMZ1 466 aa12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 OTUD3Q5T2D3 398 aaPredicted RBP12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 DEF8Q6ZN54 512 aa12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 GALNT5Q7Z7M9 940 aa12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 OFCC1Q8IZS5 231 aa12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 RNF217Q8TC41 542 aa12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 USB1Q9BQ65 265 aaKnown RBP12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 WFDC6Q9BQY6 131 aa12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 PTDSS2Q9BVG9 487 aa12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 UCK2Q9BZX2 261 aa12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 OR10A4Q9H209 315 aa12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 IL1RAPQ9NPH3 570 aa12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 BATF3Q9NR55 127 aa12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 PARPBPQ9NWS1 579 aa12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 COL12A1Q99715 3063 aa12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 IGKV1D-42A0A075B6H8 117 aa12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 LOC102725191A0A1B0GVB3 256 aa12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 NKX2-6A6NCS4 301 aa12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 OR6C65A6NJZ3 312 aa12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 ZNF716A6NP11 495 aa12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 EI24O14681 340 aa12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 GOSR1O95249 250 aa12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 CST1P01037 141 aa12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 RPS5P46782 204 aaKnown RBP12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 OR1E2P47887 323 aa12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 SP5Q6BEB4 398 aaPredicted RBP12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 TMEM225Q6GV28 225 aa12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 VWA1Q6PCB0 445 aa12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 PLXDC2Q6UX71 529 aa12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 PIWIL3Q7Z3Z3 882 aaKnown RBP12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 GDF7Q7Z4P5 450 aa12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 BTLAQ7Z6A9 289 aa12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 VTCN1Q7Z7D3 282 aa12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 RBM45Q8IUH3 476 aaKnown RBP12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 ZDHHC21Q8IVQ6 265 aa12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 TUSC5Q8IXB3 177 aa12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 TFAP2CQ92754 450 aa12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 KTI12Q96EK9 354 aaPredicted RBP12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 C7orf34Q96L11 122 aa12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 RBM24Q9BX46 236 aaKnown RBP12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 ASPNQ9BXN1 380 aa12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 FAM32AQ9Y421 112 aaKnown RBP12.45□□□□□ -0.42
PKNOX1-209ENST00000560448 USP9YO00507 2555 aaPredicted RBP12.44□□□□□ -0.42
PKNOX1-209ENST00000560448 ASH1LQ9NR48 2969 aaKnown RBP12.44□□□□□ -0.42
PKNOX1-209ENST00000560448 HCFC1P51610 2035 aa12.44□□□□□ -0.42
PKNOX1-209ENST00000560448 SMNDC1O75940 238 aaKnown RBP eCLIP12.44□□□□□ -0.42
PKNOX1-209ENST00000560448 COX6B1P14854 86 aa12.44□□□□□ -0.42
PKNOX1-209ENST00000560448 ZNF23P17027 643 aa12.44□□□□□ -0.42
PKNOX1-209ENST00000560448 RHCEP18577 417 aa12.44□□□□□ -0.42
PKNOX1-209ENST00000560448 CHN2P52757 468 aa12.44□□□□□ -0.42
PKNOX1-209ENST00000560448 SIRPAP78324 504 aa12.44□□□□□ -0.42
PKNOX1-209ENST00000560448 GK3PQ14409 553 aa12.44□□□□□ -0.42
PKNOX1-209ENST00000560448 SLC17A1Q14916 467 aa12.44□□□□□ -0.42
PKNOX1-209ENST00000560448 TRAM2Q15035 370 aa12.44□□□□□ -0.42
PKNOX1-209ENST00000560448 C1QTNF12Q5T7M4 302 aa12.44□□□□□ -0.42
PKNOX1-209ENST00000560448 H1FNTQ75WM6 255 aaPredicted RBP12.44□□□□□ -0.42
PKNOX1-209ENST00000560448 SSX8Q7RTT4 187 aa12.44□□□□□ -0.42
PKNOX1-209ENST00000560448 TMEM179BQ7Z7N9 219 aa12.44□□□□□ -0.42
PKNOX1-209ENST00000560448 RNF113BQ8IZP6 322 aaKnown RBP12.44□□□□□ -0.42
PKNOX1-209ENST00000560448 SVOPLQ8N434 492 aa12.44□□□□□ -0.42
PKNOX1-209ENST00000560448 OR5K1Q8NHB7 308 aa12.44□□□□□ -0.42
PKNOX1-209ENST00000560448 TMEM45BQ96B21 275 aa12.44□□□□□ -0.42
PKNOX1-209ENST00000560448 FNDC11Q9BVV2 318 aa12.44□□□□□ -0.42
PKNOX1-209ENST00000560448 PRR14Q9BWN1 585 aa12.44□□□□□ -0.42
PKNOX1-209ENST00000560448 ANKRD60Q9BZ19 345 aa12.44□□□□□ -0.42
PKNOX1-209ENST00000560448 AMBRA1Q9C0C7 1298 aa12.44□□□□□ -0.42
PKNOX1-209ENST00000560448 FKRPQ9H9S5 495 aa12.44□□□□□ -0.42
PKNOX1-209ENST00000560448 USE1Q9NZ43 259 aa12.44□□□□□ -0.42
PKNOX1-209ENST00000560448 ING1Q9UK53 422 aaPredicted RBP12.44□□□□□ -0.42
PKNOX1-209ENST00000560448 A4GNTQ9UNA3 340 aa12.44□□□□□ -0.42
PKNOX1-209ENST00000560448 PCDHGB5Q9Y5G0 923 aa12.44□□□□□ -0.42
PKNOX1-209ENST00000560448 ENPP4Q9Y6X5 453 aa12.44□□□□□ -0.42
PKNOX1-209ENST00000560448 MPDZO75970 2070 aa12.44□□□□□ -0.42
PKNOX1-209ENST00000560448 SPTAN1Q13813 2472 aaKnown RBP12.43□□□□□ -0.42
PKNOX1-209ENST00000560448 AKAP8O43823 692 aaKnown RBP12.43□□□□□ -0.42
PKNOX1-209ENST00000560448 AKR7A3O95154 331 aa12.43□□□□□ -0.42
PKNOX1-209ENST00000560448 LYPD3O95274 346 aa12.43□□□□□ -0.42
PKNOX1-209ENST00000560448 HPRP00739 348 aa12.43□□□□□ -0.42
PKNOX1-209ENST00000560448 PPP3CBP16298 524 aa12.43□□□□□ -0.42
PKNOX1-209ENST00000560448 CD79BP40259 229 aa12.43□□□□□ -0.42
PKNOX1-209ENST00000560448 OR3A2P47893 321 aa12.43□□□□□ -0.42
PKNOX1-209ENST00000560448 ALDH3A2P51648 485 aa12.43□□□□□ -0.42
PKNOX1-209ENST00000560448 GTF2A1P52655 376 aaPredicted RBP12.43□□□□□ -0.42
PKNOX1-209ENST00000560448 IST1P53990 364 aa12.43□□□□□ -0.42
PKNOX1-209ENST00000560448 SMIM11AP58511 58 aa12.43□□□□□ -0.42
PKNOX1-209ENST00000560448 VLDLRP98155 873 aa12.43□□□□□ -0.42
PKNOX1-209ENST00000560448 PIN1Q13526 163 aaPredicted RBP12.43□□□□□ -0.42
PKNOX1-209ENST00000560448 DAG1Q14118 895 aa12.43□□□□□ -0.42
PKNOX1-209ENST00000560448 P2RY6Q15077 328 aa12.43□□□□□ -0.42
PKNOX1-209ENST00000560448 TMEM154Q6P9G4 183 aa12.43□□□□□ -0.42
PKNOX1-209ENST00000560448 TFAP2EQ6VUC0 442 aa12.43□□□□□ -0.42
PKNOX1-209ENST00000560448 TSEN54Q7Z6J9 526 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms