RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 HNRNPCL4P0DMR1 293 aa15.12■□□□□ 0.01
CRTC3-208ENST00000560098 KITP10721 976 aa15.12■□□□□ 0.01
CRTC3-208ENST00000560098 APEHP13798 732 aaKnown RBP15.12■□□□□ 0.01
CRTC3-208ENST00000560098 HOXB1P14653 301 aaPredicted RBP15.12■□□□□ 0.01
CRTC3-208ENST00000560098 SH3BGRP55822 239 aaPredicted RBP15.12■□□□□ 0.01
CRTC3-208ENST00000560098 ROR2Q01974 943 aaKnown RBP15.12■□□□□ 0.01
CRTC3-208ENST00000560098 GTDC1Q4AE62 458 aa15.12■□□□□ 0.01
CRTC3-208ENST00000560098 NXNQ6DKJ4 435 aa15.12■□□□□ 0.01
CRTC3-208ENST00000560098 VHLLQ6RSH7 139 aa15.12■□□□□ 0.01
CRTC3-208ENST00000560098 KDM8Q8N371 416 aa15.12■□□□□ 0.01
CRTC3-208ENST00000560098 FAM169BQ8N8A8 192 aa15.12■□□□□ 0.01
CRTC3-208ENST00000560098 ANKRD42Q8N9B4 389 aa15.12■□□□□ 0.01
CRTC3-208ENST00000560098 OR4F15Q8NGB8 312 aa15.12■□□□□ 0.01
CRTC3-208ENST00000560098 ZBTB9Q96C00 473 aa15.12■□□□□ 0.01
CRTC3-208ENST00000560098 SLC25A36Q96CQ1 311 aa15.12■□□□□ 0.01
CRTC3-208ENST00000560098 NELFAQ9H3P2 528 aa15.12■□□□□ 0.01
CRTC3-208ENST00000560098 PLK3Q9H4B4 646 aa15.12■□□□□ 0.01
CRTC3-208ENST00000560098 RMND5AQ9H871 391 aa15.12■□□□□ 0.01
CRTC3-208ENST00000560098 IFT52Q9Y366 437 aa15.12■□□□□ 0.01
CRTC3-208ENST00000560098 ARFGEF3Q5TH69 2177 aa15.12■□□□□ 0.01
CRTC3-208ENST00000560098 TMEM247A6NEH6 219 aa15.11■□□□□ 0.01
CRTC3-208ENST00000560098 SLCO1B7G3V0H7 640 aa15.11■□□□□ 0.01
CRTC3-208ENST00000560098 SNNO75324 88 aaPredicted RBP15.11■□□□□ 0.01
CRTC3-208ENST00000560098 IGKV3-15P01624 115 aa15.11■□□□□ 0.01
CRTC3-208ENST00000560098 PNMTP11086 282 aa15.11■□□□□ 0.01
CRTC3-208ENST00000560098 GTF2E2P29084 291 aaKnown RBP15.11■□□□□ 0.01
CRTC3-208ENST00000560098 CALCRP30988 508 aa15.11■□□□□ 0.01
CRTC3-208ENST00000560098 PPOXP50336 477 aa15.11■□□□□ 0.01
CRTC3-208ENST00000560098 CLDN17P56750 224 aa15.11■□□□□ 0.01
CRTC3-208ENST00000560098 IQCCQ4KMZ1 466 aa15.11■□□□□ 0.01
CRTC3-208ENST00000560098 ZNF311Q5JNZ3 666 aa15.11■□□□□ 0.01
CRTC3-208ENST00000560098 FAM120AOSQ5T036 256 aa15.11■□□□□ 0.01
CRTC3-208ENST00000560098 ATG16L1Q676U5 607 aa15.11■□□□□ 0.01
CRTC3-208ENST00000560098 MSANTD1Q6ZTZ1 278 aa15.11■□□□□ 0.01
CRTC3-208ENST00000560098 IL17RELQ6ZVW7 336 aa15.11■□□□□ 0.01
CRTC3-208ENST00000560098 ZNF540Q8NDQ6 660 aa15.11■□□□□ 0.01
CRTC3-208ENST00000560098 ANKK1Q8NFD2 765 aa15.11■□□□□ 0.01
CRTC3-208ENST00000560098 VPS33AQ96AX1 596 aa15.11■□□□□ 0.01
CRTC3-208ENST00000560098 ITCHQ96J02 903 aa15.11■□□□□ 0.01
CRTC3-208ENST00000560098 MAELQ96JY0 434 aaKnown RBP15.11■□□□□ 0.01
CRTC3-208ENST00000560098 PTDSS2Q9BVG9 487 aa15.11■□□□□ 0.01
CRTC3-208ENST00000560098 PARD6BQ9BYG5 372 aa15.11■□□□□ 0.01
CRTC3-208ENST00000560098 ZIM2Q9NZV7 527 aa15.11■□□□□ 0.01
CRTC3-208ENST00000560098 FBXO9Q9UK97 447 aaPredicted RBP15.11■□□□□ 0.01
CRTC3-208ENST00000560098 RCE1Q9Y256 329 aa15.11■□□□□ 0.01
CRTC3-208ENST00000560098 ANK2Q01484 3957 aa15.11■□□□□ 0.01
CRTC3-208ENST00000560098 RPL36A-HNRNPH2H7BZ11 118 aa15.1■□□□□ 0.01
CRTC3-208ENST00000560098 ZNF43P17038 809 aa15.1■□□□□ 0.01
CRTC3-208ENST00000560098 RPS5P46782 204 aaKnown RBP15.1■□□□□ 0.01
CRTC3-208ENST00000560098 IDH3GP51553 393 aaPredicted RBP15.1■□□□□ 0.01
CRTC3-208ENST00000560098 WDR4P57081 412 aaKnown RBP15.1■□□□□ 0.01
CRTC3-208ENST00000560098 EGR4Q05215 589 aa15.1■□□□□ 0.01
CRTC3-208ENST00000560098 NUP37Q8NFH4 326 aa15.1■□□□□ 0.01
CRTC3-208ENST00000560098 SLC35B4Q969S0 331 aa15.1■□□□□ 0.01
CRTC3-208ENST00000560098 BPESC1Q9GZL8 116 aa15.1■□□□□ 0.01
CRTC3-208ENST00000560098 RAB1BQ9H0U4 201 aa15.1■□□□□ 0.01
CRTC3-208ENST00000560098 SEC61A2Q9H9S3 476 aa15.1■□□□□ 0.01
CRTC3-208ENST00000560098 SDR39U1Q9NRG7 319 aaPredicted RBP15.1■□□□□ 0.01
CRTC3-208ENST00000560098 ZNF432O94892 652 aa15.09■□□□□ 0.01
CRTC3-208ENST00000560098 ZNF23P17027 643 aa15.09■□□□□ 0.01
CRTC3-208ENST00000560098 HNF1AP20823 631 aa15.09■□□□□ 0.01
CRTC3-208ENST00000560098 ARF1P84077 181 aaKnown RBP15.09■□□□□ 0.01
CRTC3-208ENST00000560098 HOXC5Q00444 222 aa15.09■□□□□ 0.01
CRTC3-208ENST00000560098 SLC9B1Q4ZJI4 515 aa15.09■□□□□ 0.01
CRTC3-208ENST00000560098 C6orf10Q5SRN2 563 aa15.09■□□□□ 0.01
CRTC3-208ENST00000560098 CROCCP2Q86T23 111 aa15.09■□□□□ 0.01
CRTC3-208ENST00000560098 KTI12Q96EK9 354 aaPredicted RBP15.09■□□□□ 0.01
CRTC3-208ENST00000560098 ZNF442Q9H7R0 627 aa15.09■□□□□ 0.01
CRTC3-208ENST00000560098 BCL2L10Q9HD36 194 aa15.09■□□□□ 0.01
CRTC3-208ENST00000560098 B3GAT1Q9P2W7 334 aa15.09■□□□□ 0.01
CRTC3-208ENST00000560098 SEC14L4Q9UDX3 406 aa15.09■□□□□ 0.01
CRTC3-208ENST00000560098 TMEM120BA0PK00 339 aa15.09■□□□□ 0.01
CRTC3-208ENST00000560098 VSTM5A8MXK1 200 aa15.09■□□□□ 0.01
CRTC3-208ENST00000560098 SLC43A1O75387 559 aa15.09■□□□□ 0.01
CRTC3-208ENST00000560098 TGFAP01135 160 aa15.09■□□□□ 0.01
CRTC3-208ENST00000560098 CELA3BP08861 270 aa15.09■□□□□ 0.01
CRTC3-208ENST00000560098 NUDT7P0C024 238 aa15.09■□□□□ 0.01
CRTC3-208ENST00000560098 CBR1P16152 277 aa15.09■□□□□ 0.01
CRTC3-208ENST00000560098 POLR2JP52435 117 aaKnown RBP15.09■□□□□ 0.01
CRTC3-208ENST00000560098 HGFACQ04756 655 aa15.09■□□□□ 0.01
CRTC3-208ENST00000560098 RGNQ15493 299 aa15.09■□□□□ 0.01
CRTC3-208ENST00000560098 C6orf89Q6UWU4 347 aa15.09■□□□□ 0.01
CRTC3-208ENST00000560098 GPR137CQ8N3F9 429 aa15.09■□□□□ 0.01
CRTC3-208ENST00000560098 OR9I1Q8NGQ6 314 aa15.09■□□□□ 0.01
CRTC3-208ENST00000560098 MGARPQ8TDB4 240 aa15.09■□□□□ 0.01
CRTC3-208ENST00000560098 OXGR1Q96P68 337 aa15.09■□□□□ 0.01
CRTC3-208ENST00000560098 C19orf24Q9BVV8 132 aa15.09■□□□□ 0.01
CRTC3-208ENST00000560098 C12orf10Q9HB07 376 aa15.09■□□□□ 0.01
CRTC3-208ENST00000560098 GPR35Q9HC97 309 aa15.09■□□□□ 0.01
CRTC3-208ENST00000560098 A4GALTQ9NPC4 353 aa15.09■□□□□ 0.01
CRTC3-208ENST00000560098 hCG_2039718K7EN88 272 aa15.08■□□□□ 0
CRTC3-208ENST00000560098 AIM2O14862 343 aa15.08■□□□□ 0
CRTC3-208ENST00000560098 OR2T1O43869 369 aa15.08■□□□□ 0
CRTC3-208ENST00000560098 FZD7O75084 574 aa15.08■□□□□ 0
CRTC3-208ENST00000560098 STAMBPO95630 424 aa15.08■□□□□ 0
CRTC3-208ENST00000560098 ERCC1P07992 297 aaPredicted RBP15.08■□□□□ 0
CRTC3-208ENST00000560098 NPR2P20594 1047 aa15.08■□□□□ 0
CRTC3-208ENST00000560098 THBS4P35443 961 aa15.08■□□□□ 0
CRTC3-208ENST00000560098 C1DQ13901 141 aaKnown RBP15.08■□□□□ 0
CRTC3-208ENST00000560098 MAVSQ7Z434 540 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms