RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 PLPP3O14495 311 aa11.46□□□□□ -0.58
USP3-213ENST00000559711 GYPBP06028 91 aa11.46□□□□□ -0.58
USP3-213ENST00000559711 CCL3P10147 92 aa11.46□□□□□ -0.58
USP3-213ENST00000559711 ADH6P28332 368 aa11.46□□□□□ -0.58
USP3-213ENST00000559711 CLK1P49759 484 aaKnown RBP11.46□□□□□ -0.58
USP3-213ENST00000559711 DIO1P49895 249 aa11.46□□□□□ -0.58
USP3-213ENST00000559711 LGALS3BPQ08380 585 aa11.46□□□□□ -0.58
USP3-213ENST00000559711 DBPQ10586 325 aaPredicted RBP11.46□□□□□ -0.58
USP3-213ENST00000559711 GGTLC2Q14390 218 aa11.46□□□□□ -0.58
USP3-213ENST00000559711 ZNF468Q5VIY5 522 aaPredicted RBP11.46□□□□□ -0.58
USP3-213ENST00000559711 PRAMEF20Q5VT98 475 aa11.46□□□□□ -0.58
USP3-213ENST00000559711 JMJD6Q6NYC1 403 aaPredicted RBP11.46□□□□□ -0.58
USP3-213ENST00000559711 GDPGP1Q6ZNW5 385 aa11.46□□□□□ -0.58
USP3-213ENST00000559711 RAB43Q86YS6 212 aa11.46□□□□□ -0.58
USP3-213ENST00000559711 PHC2Q8IXK0 858 aa11.46□□□□□ -0.58
USP3-213ENST00000559711 KLHL36Q8N4N3 616 aa11.46□□□□□ -0.58
USP3-213ENST00000559711 TMEM99Q8N816 258 aa11.46□□□□□ -0.58
USP3-213ENST00000559711 EXD3Q8N9H8 876 aa11.46□□□□□ -0.58
USP3-213ENST00000559711 OR4K17Q8NGC6 315 aa11.46□□□□□ -0.58
USP3-213ENST00000559711 OR9Q1Q8NGQ5 310 aa11.46□□□□□ -0.58
USP3-213ENST00000559711 DYNC2LI1Q8TCX1 351 aa11.46□□□□□ -0.58
USP3-213ENST00000559711 GATAD2BQ8WXI9 593 aa11.46□□□□□ -0.58
USP3-213ENST00000559711 PSMF1Q92530 271 aa11.46□□□□□ -0.58
USP3-213ENST00000559711 DDIT4LQ96D03 193 aa11.46□□□□□ -0.58
USP3-213ENST00000559711 TSPAN32Q96QS1 320 aa11.46□□□□□ -0.58
USP3-213ENST00000559711 PTGES2Q9H7Z7 377 aa11.46□□□□□ -0.58
USP3-213ENST00000559711 ASB6Q9NWX5 421 aa11.46□□□□□ -0.58
USP3-213ENST00000559711 NDUFB11Q9NX14 153 aa11.46□□□□□ -0.58
USP3-213ENST00000559711 GRHPRQ9UBQ7 328 aa11.46□□□□□ -0.58
USP3-213ENST00000559711 CAB39Q9Y376 341 aaPredicted RBP11.46□□□□□ -0.58
USP3-213ENST00000559711 CORINQ9Y5Q5 1042 aa11.46□□□□□ -0.58
USP3-213ENST00000559711 AHCTF1Q8WYP5 2266 aa11.45□□□□□ -0.58
USP3-213ENST00000559711 EXPH5Q8NEV8 1989 aa11.45□□□□□ -0.58
USP3-213ENST00000559711 FAM47E-STBD1D6RA91 191 aa11.45□□□□□ -0.58
USP3-213ENST00000559711 SPI1P17947 270 aa11.45□□□□□ -0.58
USP3-213ENST00000559711 CSRP1P21291 193 aaKnown RBP11.45□□□□□ -0.58
USP3-213ENST00000559711 FKBP2P26885 142 aaKnown RBP11.45□□□□□ -0.58
USP3-213ENST00000559711 CD82P27701 267 aa11.45□□□□□ -0.58
USP3-213ENST00000559711 IDUAP35475 653 aa11.45□□□□□ -0.58
USP3-213ENST00000559711 EIF1P41567 113 aaKnown RBP11.45□□□□□ -0.58
USP3-213ENST00000559711 SLC16A1P53985 500 aa11.45□□□□□ -0.58
USP3-213ENST00000559711 TUBA1BP68363 451 aa11.45□□□□□ -0.58
USP3-213ENST00000559711 ROR2Q01974 943 aaKnown RBP11.45□□□□□ -0.58
USP3-213ENST00000559711 ZP4Q12836 540 aa11.45□□□□□ -0.58
USP3-213ENST00000559711 GALEQ14376 348 aa11.45□□□□□ -0.58
USP3-213ENST00000559711 PON3Q15166 354 aa11.45□□□□□ -0.58
USP3-213ENST00000559711 ACER2Q5QJU3 275 aa11.45□□□□□ -0.58
USP3-213ENST00000559711 LCN1P1Q5VSP4 162 aa11.45□□□□□ -0.58
USP3-213ENST00000559711 SLC6A19Q695T7 634 aa11.45□□□□□ -0.58
USP3-213ENST00000559711 LEG1Q6P5S2 330 aa11.45□□□□□ -0.58
USP3-213ENST00000559711 ZNF322Q6U7Q0 402 aaPredicted RBP11.45□□□□□ -0.58
USP3-213ENST00000559711 TUBA1AQ71U36 451 aa11.45□□□□□ -0.58
USP3-213ENST00000559711 JAZF1Q86VZ6 243 aa11.45□□□□□ -0.58
USP3-213ENST00000559711 SCAIQ8N9R8 606 aa11.45□□□□□ -0.58
USP3-213ENST00000559711 LSM14AQ8ND56 463 aaKnown RBP11.45□□□□□ -0.58
USP3-213ENST00000559711 ZPLD1Q8TCW7 415 aa11.45□□□□□ -0.58
USP3-213ENST00000559711 NKD1Q969G9 470 aa11.45□□□□□ -0.58
USP3-213ENST00000559711 ZHX1-C8orf76Q96EF9 292 aa11.45□□□□□ -0.58
USP3-213ENST00000559711 ARL5BQ96KC2 179 aa11.45□□□□□ -0.58
USP3-213ENST00000559711 IP6K3Q96PC2 410 aa11.45□□□□□ -0.58
USP3-213ENST00000559711 TIMP4Q99727 224 aa11.45□□□□□ -0.58
USP3-213ENST00000559711 COL25A1Q9BXS0 654 aaPredicted RBP11.45□□□□□ -0.58
USP3-213ENST00000559711 SERINC1Q9NRX5 453 aa11.45□□□□□ -0.58
USP3-213ENST00000559711 INIPQ9NRY2 104 aa11.45□□□□□ -0.58
USP3-213ENST00000559711 SEC14L4Q9UDX3 406 aa11.45□□□□□ -0.58
USP3-213ENST00000559711 ZNF346Q9UL40 294 aaKnown RBP11.45□□□□□ -0.58
USP3-213ENST00000559711 SDK2Q58EX2 2172 aa11.45□□□□□ -0.58
USP3-213ENST00000559711 SHISA8B8ZZ34 492 aa11.44□□□□□ -0.58
USP3-213ENST00000559711 SNPHO15079 494 aa11.44□□□□□ -0.58
USP3-213ENST00000559711 SNX4O95219 450 aa11.44□□□□□ -0.58
USP3-213ENST00000559711 IGHMP01871 453 aa11.44□□□□□ -0.58
USP3-213ENST00000559711 IL11P20809 199 aa11.44□□□□□ -0.58
USP3-213ENST00000559711 PSMA1P25786 263 aaKnown RBP11.44□□□□□ -0.58
USP3-213ENST00000559711 CD79BP40259 229 aa11.44□□□□□ -0.58
USP3-213ENST00000559711 CRYBB2P43320 205 aa11.44□□□□□ -0.58
USP3-213ENST00000559711 BDH1Q02338 343 aa11.44□□□□□ -0.58
USP3-213ENST00000559711 KRR1Q13601 381 aaKnown RBP11.44□□□□□ -0.58
USP3-213ENST00000559711 ATP1A4Q13733 1029 aa11.44□□□□□ -0.58
USP3-213ENST00000559711 MESTQ5EB52 335 aa11.44□□□□□ -0.58
USP3-213ENST00000559711 LIPKQ5VXJ0 399 aa11.44□□□□□ -0.58
USP3-213ENST00000559711 B3GNTL1Q67FW5 361 aaPredicted RBP11.44□□□□□ -0.58
USP3-213ENST00000559711 TMPRSS11AQ6ZMR5 421 aa11.44□□□□□ -0.58
USP3-213ENST00000559711 USP43Q70EL4 1123 aa11.44□□□□□ -0.58
USP3-213ENST00000559711 DTX1Q86Y01 620 aa11.44□□□□□ -0.58
USP3-213ENST00000559711 GPALPP1Q8IXQ4 340 aa11.44□□□□□ -0.58
USP3-213ENST00000559711 POMGNT2Q8NAT1 580 aa11.44□□□□□ -0.58
USP3-213ENST00000559711 ZNF417Q8TAU3 575 aa11.44□□□□□ -0.58
USP3-213ENST00000559711 ZNRF4Q8WWF5 429 aa11.44□□□□□ -0.58
USP3-213ENST00000559711 SMPDL3BQ92485 455 aa11.44□□□□□ -0.58
USP3-213ENST00000559711 ZBTB8AQ96BR9 441 aa11.44□□□□□ -0.58
USP3-213ENST00000559711 DNAJA3Q96EY1 480 aa11.44□□□□□ -0.58
USP3-213ENST00000559711 TMEM41AQ96HV5 264 aa11.44□□□□□ -0.58
USP3-213ENST00000559711 SNX18Q96RF0 628 aa11.44□□□□□ -0.58
USP3-213ENST00000559711 ZNF587Q96SQ5 575 aaPredicted RBP11.44□□□□□ -0.58
USP3-213ENST00000559711 MOKQ9UQ07 419 aa11.44□□□□□ -0.58
USP3-213ENST00000559711 SPIN1Q9Y657 262 aaPredicted RBP11.44□□□□□ -0.58
USP3-213ENST00000559711 MRPS18BQ9Y676 258 aaKnown RBP11.44□□□□□ -0.58
USP3-213ENST00000559711 DAPL1A0PJW8 107 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 LIPT2A6NK58 231 aa11.43□□□□□ -0.58
USP3-213ENST00000559711 CDRT15L2A8MXV6 281 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms