RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 FBXW5Q969U6 566 aa9.62□□□□□ -0.87
SPG11-216ENST00000559347 RCN3Q96D15 328 aa9.62□□□□□ -0.87
SPG11-216ENST00000559347 MUCL1Q96DR8 90 aa9.62□□□□□ -0.87
SPG11-216ENST00000559347 MCHR1Q99705 422 aa9.62□□□□□ -0.87
SPG11-216ENST00000559347 SH3GL1Q99961 368 aa9.62□□□□□ -0.87
SPG11-216ENST00000559347 TMEM43Q9BTV4 400 aa9.62□□□□□ -0.87
SPG11-216ENST00000559347 TMEM27Q9HBJ8 222 aa9.62□□□□□ -0.87
SPG11-216ENST00000559347 SELENONQ9NZV5 590 aa9.62□□□□□ -0.87
SPG11-216ENST00000559347 USP22Q9UPT9 525 aa9.62□□□□□ -0.87
SPG11-216ENST00000559347 SLC25A15Q9Y619 301 aa9.62□□□□□ -0.87
SPG11-216ENST00000559347 ZFHX3Q15911 3703 aa9.62□□□□□ -0.87
SPG11-216ENST00000559347 LOC100653049A0A140TA62 436 aa9.61□□□□□ -0.87
SPG11-216ENST00000559347 A0A1W2PR80 420 aa9.61□□□□□ -0.87
SPG11-216ENST00000559347 CPSF4LA6NMK7 179 aaKnown RBP9.61□□□□□ -0.87
SPG11-216ENST00000559347 FAM220BPB1ANY3 271 aa9.61□□□□□ -0.87
SPG11-216ENST00000559347 ABCD4O14678 606 aa9.61□□□□□ -0.87
SPG11-216ENST00000559347 TRAF3IP2O43734 574 aaPredicted RBP9.61□□□□□ -0.87
SPG11-216ENST00000559347 KRT34O76011 436 aa9.61□□□□□ -0.87
SPG11-216ENST00000559347 THY1P04216 161 aa9.61□□□□□ -0.87
SPG11-216ENST00000559347 CD99P14209 185 aa9.61□□□□□ -0.87
SPG11-216ENST00000559347 MPGP29372 298 aa9.61□□□□□ -0.87
SPG11-216ENST00000559347 NKX6-1P78426 367 aaPredicted RBP9.61□□□□□ -0.87
SPG11-216ENST00000559347 LGALS3BPQ08380 585 aa9.61□□□□□ -0.87
SPG11-216ENST00000559347 VEZF1Q14119 521 aa9.61□□□□□ -0.87
SPG11-216ENST00000559347 ZNF672Q499Z4 452 aaPredicted RBP9.61□□□□□ -0.87
SPG11-216ENST00000559347 ENTPD8Q5MY95 495 aa9.61□□□□□ -0.87
SPG11-216ENST00000559347 Q5PR19 223 aa9.61□□□□□ -0.87
SPG11-216ENST00000559347 NIPAL3Q6P499 406 aa9.61□□□□□ -0.87
SPG11-216ENST00000559347 ERICH5Q6P6B1 374 aa9.61□□□□□ -0.87
SPG11-216ENST00000559347 WDR88Q6ZMY6 472 aa9.61□□□□□ -0.87
SPG11-216ENST00000559347 LINGO2Q7L985 606 aa9.61□□□□□ -0.87
SPG11-216ENST00000559347 RBM45Q8IUH3 476 aaKnown RBP9.61□□□□□ -0.87
SPG11-216ENST00000559347 KDM8Q8N371 416 aa9.61□□□□□ -0.87
SPG11-216ENST00000559347 RNF217Q8TC41 542 aa9.61□□□□□ -0.87
SPG11-216ENST00000559347 SLC26A7Q8TE54 656 aa9.61□□□□□ -0.87
SPG11-216ENST00000559347 ADAMTS16Q8TE57 1224 aa9.61□□□□□ -0.87
SPG11-216ENST00000559347 NEUROG1Q92886 237 aa9.61□□□□□ -0.87
SPG11-216ENST00000559347 SLC41A3Q96GZ6 507 aa9.61□□□□□ -0.87
SPG11-216ENST00000559347 ZNF583Q96ND8 569 aa9.61□□□□□ -0.87
SPG11-216ENST00000559347 MUS81Q96NY9 551 aa9.61□□□□□ -0.87
SPG11-216ENST00000559347 MOGAT1Q96PD6 335 aa9.61□□□□□ -0.87
SPG11-216ENST00000559347 EPYCQ99645 322 aa9.61□□□□□ -0.87
SPG11-216ENST00000559347 ECSITQ9BQ95 431 aa9.61□□□□□ -0.87
SPG11-216ENST00000559347 PCDHAC1Q9H158 963 aa9.61□□□□□ -0.87
SPG11-216ENST00000559347 DLL4Q9NR61 685 aa9.61□□□□□ -0.87
SPG11-216ENST00000559347 GID8Q9NWU2 228 aa9.61□□□□□ -0.87
SPG11-216ENST00000559347 RCE1Q9Y256 329 aa9.61□□□□□ -0.87
SPG11-216ENST00000559347 B3GALT5Q9Y2C3 310 aa9.61□□□□□ -0.87
SPG11-216ENST00000559347 AMDHD2Q9Y303 409 aa9.61□□□□□ -0.87
SPG11-216ENST00000559347 NSD1Q96L73 2696 aaPredicted RBP9.61□□□□□ -0.87
SPG11-216ENST00000559347 HEATR1Q9H583 2144 aaKnown RBP9.61□□□□□ -0.87
SPG11-216ENST00000559347 SETD2Q9BYW2 2564 aaPredicted RBP9.61□□□□□ -0.87
SPG11-216ENST00000559347 OR6C65A6NJZ3 312 aa9.6□□□□□ -0.87
SPG11-216ENST00000559347 SHISA9B4DS77 424 aa9.6□□□□□ -0.87
SPG11-216ENST00000559347 ZNF587BE7ETH6 402 aa9.6□□□□□ -0.87
SPG11-216ENST00000559347 ZNF432O94892 652 aa9.6□□□□□ -0.87
SPG11-216ENST00000559347 LYPD3O95274 346 aa9.6□□□□□ -0.87
SPG11-216ENST00000559347 HPRP00739 348 aa9.6□□□□□ -0.87
SPG11-216ENST00000559347 DANCRP0C864 163 aa9.6□□□□□ -0.87
SPG11-216ENST00000559347 ZNF43P17038 809 aa9.6□□□□□ -0.87
SPG11-216ENST00000559347 CBLP22681 906 aa9.6□□□□□ -0.87
SPG11-216ENST00000559347 PTH2RP49190 550 aa9.6□□□□□ -0.87
SPG11-216ENST00000559347 CDH11P55287 796 aa9.6□□□□□ -0.87
SPG11-216ENST00000559347 CLDN17P56750 224 aa9.6□□□□□ -0.87
SPG11-216ENST00000559347 TGFBR3Q03167 851 aa9.6□□□□□ -0.87
SPG11-216ENST00000559347 LTBQ06643 244 aa9.6□□□□□ -0.87
SPG11-216ENST00000559347 SPOCK1Q08629 439 aa9.6□□□□□ -0.87
SPG11-216ENST00000559347 MFSD13AQ14CX5 517 aa9.6□□□□□ -0.87
SPG11-216ENST00000559347 SHEQ5VZ18 495 aa9.6□□□□□ -0.87
SPG11-216ENST00000559347 TMEM108Q6UXF1 575 aa9.6□□□□□ -0.87
SPG11-216ENST00000559347 LINC00114Q6XXX2 140 aa9.6□□□□□ -0.87
SPG11-216ENST00000559347 H1FNTQ75WM6 255 aaPredicted RBP9.6□□□□□ -0.87
SPG11-216ENST00000559347 SPATA21Q7Z572 469 aa9.6□□□□□ -0.87
SPG11-216ENST00000559347 ABHD12BQ7Z5M8 362 aaPredicted RBP9.6□□□□□ -0.87
SPG11-216ENST00000559347 SCAIQ8N9R8 606 aa9.6□□□□□ -0.87
SPG11-216ENST00000559347 WDR31Q8NA23 367 aa9.6□□□□□ -0.87
SPG11-216ENST00000559347 RP9Q8TA86 221 aaKnown RBP9.6□□□□□ -0.87
SPG11-216ENST00000559347 TMEM171Q8WVE6 324 aa9.6□□□□□ -0.87
SPG11-216ENST00000559347 PERPQ96FX8 193 aa9.6□□□□□ -0.87
SPG11-216ENST00000559347 BOD1Q96IK1 185 aa9.6□□□□□ -0.87
SPG11-216ENST00000559347 OXGR1Q96P68 337 aa9.6□□□□□ -0.87
SPG11-216ENST00000559347 ZNF426Q9BUY5 554 aa9.6□□□□□ -0.87
SPG11-216ENST00000559347 GSX2Q9BZM3 304 aa9.6□□□□□ -0.87
SPG11-216ENST00000559347 LINC00470Q9BZP3 86 aa9.6□□□□□ -0.87
SPG11-216ENST00000559347 SLC17A5Q9NRA2 495 aa9.6□□□□□ -0.87
SPG11-216ENST00000559347 SLC7A7Q9UM01 511 aa9.6□□□□□ -0.87
SPG11-216ENST00000559347 CORINQ9Y5Q5 1042 aa9.6□□□□□ -0.87
SPG11-216ENST00000559347 NIPBLQ6KC79 2804 aaeCLIP9.6□□□□□ -0.87
SPG11-216ENST00000559347 LOC102725191A0A1B0GVB3 256 aa9.59□□□□□ -0.87
SPG11-216ENST00000559347 TRAPPC13A5PLN9 417 aa9.59□□□□□ -0.87
SPG11-216ENST00000559347 LRRN3E7EW58 273 aa9.59□□□□□ -0.87
SPG11-216ENST00000559347 AKAP8O43823 692 aaKnown RBP9.59□□□□□ -0.87
SPG11-216ENST00000559347 TMCC2O75069 709 aa9.59□□□□□ -0.87
SPG11-216ENST00000559347 UPK3AO75631 287 aa9.59□□□□□ -0.87
SPG11-216ENST00000559347 KRT33AO76009 404 aa9.59□□□□□ -0.87
SPG11-216ENST00000559347 MT-ATP6P00846 226 aa9.59□□□□□ -0.87
SPG11-216ENST00000559347 SOD3P08294 240 aa9.59□□□□□ -0.87
SPG11-216ENST00000559347 COX4I1P13073 169 aa9.59□□□□□ -0.87
SPG11-216ENST00000559347 NQO1P15559 274 aaKnown RBP9.59□□□□□ -0.87
SPG11-216ENST00000559347 PAX1P15863 534 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms