RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 SLC43A2Q8N370 569 aa13.2□□□□□ -0.3
SNRPA1-207ENST00000559309 CLDN22Q8N7P3 220 aa13.2□□□□□ -0.3
SNRPA1-207ENST00000559309 ZIC4Q8N9L1 334 aa13.2□□□□□ -0.3
SNRPA1-207ENST00000559309 C9orf106Q8NAJ2 232 aa13.2□□□□□ -0.3
SNRPA1-207ENST00000559309 RNF217Q8TC41 542 aa13.2□□□□□ -0.3
SNRPA1-207ENST00000559309 STMN2Q93045 179 aa13.2□□□□□ -0.3
SNRPA1-207ENST00000559309 ZFP3Q96NJ6 502 aa13.2□□□□□ -0.3
SNRPA1-207ENST00000559309 GPX7Q96SL4 187 aaPredicted RBP13.2□□□□□ -0.3
SNRPA1-207ENST00000559309 FEVQ99581 238 aa13.2□□□□□ -0.3
SNRPA1-207ENST00000559309 TAPBPLQ9BX59 468 aa13.2□□□□□ -0.3
SNRPA1-207ENST00000559309 MCCC2Q9HCC0 563 aa13.2□□□□□ -0.3
SNRPA1-207ENST00000559309 REV1Q9UBZ9 1251 aa13.2□□□□□ -0.3
SNRPA1-207ENST00000559309 TMEFF2Q9UIK5 374 aaPredicted RBP13.2□□□□□ -0.3
SNRPA1-207ENST00000559309 MCTS1Q9ULC4 181 aaKnown RBP13.2□□□□□ -0.3
SNRPA1-207ENST00000559309 OAZ3Q9UMX2 235 aa13.2□□□□□ -0.3
SNRPA1-207ENST00000559309 MEMO1Q9Y316 297 aa13.2□□□□□ -0.3
SNRPA1-207ENST00000559309 RRP15Q9Y3B9 282 aaKnown RBP13.2□□□□□ -0.3
SNRPA1-207ENST00000559309 HIVEP3Q5T1R4 2406 aa13.2□□□□□ -0.3
SNRPA1-207ENST00000559309 ZNF724A8MTY0 619 aa13.19□□□□□ -0.3
SNRPA1-207ENST00000559309 GNGT2O14610 69 aa13.19□□□□□ -0.3
SNRPA1-207ENST00000559309 SS18L1O75177 396 aaPredicted RBP13.19□□□□□ -0.3
SNRPA1-207ENST00000559309 CRHP06850 196 aa13.19□□□□□ -0.3
SNRPA1-207ENST00000559309 FCGR2AP12318 317 aa13.19□□□□□ -0.3
SNRPA1-207ENST00000559309 ANXA8P13928 327 aa13.19□□□□□ -0.3
SNRPA1-207ENST00000559309 IFNGR2P38484 337 aa13.19□□□□□ -0.3
SNRPA1-207ENST00000559309 GPR4P46093 362 aa13.19□□□□□ -0.3
SNRPA1-207ENST00000559309 UQCRFS1P47985 274 aa13.19□□□□□ -0.3
SNRPA1-207ENST00000559309 COX10Q12887 443 aa13.19□□□□□ -0.3
SNRPA1-207ENST00000559309 RNPS1Q15287 305 aaKnown RBP13.19□□□□□ -0.3
SNRPA1-207ENST00000559309 RCN1Q15293 331 aa13.19□□□□□ -0.3
SNRPA1-207ENST00000559309 OTUD3Q5T2D3 398 aaPredicted RBP13.19□□□□□ -0.3
SNRPA1-207ENST00000559309 RIPPLY2Q5TAB7 128 aa13.19□□□□□ -0.3
SNRPA1-207ENST00000559309 RASSF6Q6ZTQ3 369 aa13.19□□□□□ -0.3
SNRPA1-207ENST00000559309 CCDC103Q8IW40 242 aa13.19□□□□□ -0.3
SNRPA1-207ENST00000559309 GNPDA2Q8TDQ7 276 aa13.19□□□□□ -0.3
SNRPA1-207ENST00000559309 ROBO4Q8WZ75 1007 aa13.19□□□□□ -0.3
SNRPA1-207ENST00000559309 DNAJA3Q96EY1 480 aa13.19□□□□□ -0.3
SNRPA1-207ENST00000559309 TRIB1Q96RU8 372 aa13.19□□□□□ -0.3
SNRPA1-207ENST00000559309 NIPSNAP1Q9BPW8 284 aa13.19□□□□□ -0.3
SNRPA1-207ENST00000559309 NAA11Q9BSU3 229 aaPredicted RBP13.19□□□□□ -0.3
SNRPA1-207ENST00000559309 SEMA6AQ9H2E6 1030 aa13.19□□□□□ -0.3
SNRPA1-207ENST00000559309 GLRX2Q9NS18 164 aa13.19□□□□□ -0.3
SNRPA1-207ENST00000559309 IL20Q9NYY1 176 aa13.19□□□□□ -0.3
SNRPA1-207ENST00000559309 USE1Q9NZ43 259 aa13.19□□□□□ -0.3
SNRPA1-207ENST00000559309 PDP1Q9P0J1 537 aaPredicted RBP13.19□□□□□ -0.3
SNRPA1-207ENST00000559309 OSGIN2Q9Y236 505 aa13.19□□□□□ -0.3
SNRPA1-207ENST00000559309 RASD1Q9Y272 281 aa13.19□□□□□ -0.3
SNRPA1-207ENST00000559309 NOTCH2Q04721 2471 aa13.19□□□□□ -0.3
SNRPA1-207ENST00000559309 RP1L1Q8IWN7 2480 aaPredicted RBP13.18□□□□□ -0.3
SNRPA1-207ENST00000559309 IGHV3-15A0A0B4J1V0 119 aa13.18□□□□□ -0.3
SNRPA1-207ENST00000559309 EFCAB9A8MZ26 197 aa13.18□□□□□ -0.3
SNRPA1-207ENST00000559309 G3V2T6 193 aa13.18□□□□□ -0.3
SNRPA1-207ENST00000559309 TRAF3IP2O43734 574 aaPredicted RBP13.18□□□□□ -0.3
SNRPA1-207ENST00000559309 IGHMP01871 453 aa13.18□□□□□ -0.3
SNRPA1-207ENST00000559309 PRKACGP22612 351 aa13.18□□□□□ -0.3
SNRPA1-207ENST00000559309 GNLYP22749 145 aa13.18□□□□□ -0.3
SNRPA1-207ENST00000559309 NTF4P34130 210 aa13.18□□□□□ -0.3
SNRPA1-207ENST00000559309 DAPP51397 102 aa13.18□□□□□ -0.3
SNRPA1-207ENST00000559309 RPL18Q07020 188 aaKnown RBP13.18□□□□□ -0.3
SNRPA1-207ENST00000559309 PUDPQ08623 228 aa13.18□□□□□ -0.3
SNRPA1-207ENST00000559309 ZBED5Q49AG3 693 aa13.18□□□□□ -0.3
SNRPA1-207ENST00000559309 ANKRD34AQ69YU3 496 aa13.18□□□□□ -0.3
SNRPA1-207ENST00000559309 ZNF620Q6ZNG0 422 aa13.18□□□□□ -0.3
SNRPA1-207ENST00000559309 RRM2BQ7LG56 351 aa13.18□□□□□ -0.3
SNRPA1-207ENST00000559309 PXKQ7Z7A4 578 aa13.18□□□□□ -0.3
SNRPA1-207ENST00000559309 MEX3DQ86XN8 651 aaKnown RBP13.18□□□□□ -0.3
SNRPA1-207ENST00000559309 KIF18BQ86Y91 864 aa13.18□□□□□ -0.3
SNRPA1-207ENST00000559309 CDK20Q8IZL9 346 aa13.18□□□□□ -0.3
SNRPA1-207ENST00000559309 PARP8Q8N3A8 854 aa13.18□□□□□ -0.3
SNRPA1-207ENST00000559309 AQP11Q8NBQ7 271 aa13.18□□□□□ -0.3
SNRPA1-207ENST00000559309 NAXEQ8NCW5 288 aa13.18□□□□□ -0.3
SNRPA1-207ENST00000559309 ABHD3Q8WU67 409 aa13.18□□□□□ -0.3
SNRPA1-207ENST00000559309 DNAJC9Q8WXX5 260 aa13.18□□□□□ -0.3
SNRPA1-207ENST00000559309 TMEM45BQ96B21 275 aa13.18□□□□□ -0.3
SNRPA1-207ENST00000559309 SLC25A36Q96CQ1 311 aa13.18□□□□□ -0.3
SNRPA1-207ENST00000559309 ZHX1-C8orf76Q96EF9 292 aa13.18□□□□□ -0.3
SNRPA1-207ENST00000559309 GMPPAQ96IJ6 420 aaPredicted RBP13.18□□□□□ -0.3
SNRPA1-207ENST00000559309 OXGR1Q96P68 337 aa13.18□□□□□ -0.3
SNRPA1-207ENST00000559309 TNFRSF13CQ96RJ3 184 aa13.18□□□□□ -0.3
SNRPA1-207ENST00000559309 TM9SF2Q99805 663 aa13.18□□□□□ -0.3
SNRPA1-207ENST00000559309 ASPNQ9BXN1 380 aa13.18□□□□□ -0.3
SNRPA1-207ENST00000559309 ENKD1Q9H0I2 346 aa13.18□□□□□ -0.3
SNRPA1-207ENST00000559309 RNPEPL1Q9HAU8 725 aa13.18□□□□□ -0.3
SNRPA1-207ENST00000559309 KRCC1Q9NPI7 259 aaPredicted RBP13.18□□□□□ -0.3
SNRPA1-207ENST00000559309 NKX1-2Q9UD57 310 aaPredicted RBP13.18□□□□□ -0.3
SNRPA1-207ENST00000559309 FLVCR1Q9Y5Y0 555 aa13.18□□□□□ -0.3
SNRPA1-207ENST00000559309 ESPL1Q14674 2120 aa13.18□□□□□ -0.3
SNRPA1-207ENST00000559309 SPTAN1Q13813 2472 aaKnown RBP13.17□□□□□ -0.3
SNRPA1-207ENST00000559309 USP9XQ93008 2570 aaPredicted RBP13.17□□□□□ -0.3
SNRPA1-207ENST00000559309 CLEC18AA5D8T8 446 aa13.17□□□□□ -0.3
SNRPA1-207ENST00000559309 E2F6O75461 281 aa13.17□□□□□ -0.3
SNRPA1-207ENST00000559309 TNFSF13O75888 250 aa13.17□□□□□ -0.3
SNRPA1-207ENST00000559309 ZNF432O94892 652 aa13.17□□□□□ -0.3
SNRPA1-207ENST00000559309 SYNGR4O95473 234 aa13.17□□□□□ -0.3
SNRPA1-207ENST00000559309 ALPLP05186 524 aa13.17□□□□□ -0.3
SNRPA1-207ENST00000559309 NUP107P57740 925 aa13.17□□□□□ -0.3
SNRPA1-207ENST00000559309 PRPS1P60891 318 aa13.17□□□□□ -0.3
SNRPA1-207ENST00000559309 EIF2S3LQ2VIR3 472 aaKnown RBP13.17□□□□□ -0.3
SNRPA1-207ENST00000559309 C4orf17Q53FE4 359 aa13.17□□□□□ -0.3
SNRPA1-207ENST00000559309 OR2A2Q6IF42 318 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms