RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 POMPQ9Y244 141 aa12.17□□□□□ -0.46
SHMT2-234ENST00000557703 NOSIPQ9Y314 301 aaKnown RBP12.17□□□□□ -0.46
SHMT2-234ENST00000557703 FLVCR1Q9Y5Y0 555 aa12.17□□□□□ -0.46
SHMT2-234ENST00000557703 ASH1LQ9NR48 2969 aaKnown RBP12.16□□□□□ -0.46
SHMT2-234ENST00000557703 HECTD1Q9ULT8 2610 aa12.16□□□□□ -0.46
SHMT2-234ENST00000557703 NPIPB13A6NJU9 1138 aa12.16□□□□□ -0.46
SHMT2-234ENST00000557703 FAM90A27PA6NNH2 459 aa12.16□□□□□ -0.46
SHMT2-234ENST00000557703 NPIPB4C9JG80 1138 aa12.16□□□□□ -0.46
SHMT2-234ENST00000557703 M0R082 166 aa12.16□□□□□ -0.46
SHMT2-234ENST00000557703 OR6A2O95222 327 aa12.16□□□□□ -0.46
SHMT2-234ENST00000557703 CLDN1O95832 211 aa12.16□□□□□ -0.46
SHMT2-234ENST00000557703 RNF224P0DH78 156 aa12.16□□□□□ -0.46
SHMT2-234ENST00000557703 NQO1P15559 274 aaKnown RBP12.16□□□□□ -0.46
SHMT2-234ENST00000557703 ATP6V1B2P21281 511 aa12.16□□□□□ -0.46
SHMT2-234ENST00000557703 PAX7P23759 505 aa12.16□□□□□ -0.46
SHMT2-234ENST00000557703 CD79BP40259 229 aa12.16□□□□□ -0.46
SHMT2-234ENST00000557703 PRKCDQ05655 676 aa12.16□□□□□ -0.46
SHMT2-234ENST00000557703 PMS2P3Q13401 168 aa12.16□□□□□ -0.46
SHMT2-234ENST00000557703 VWA1Q6PCB0 445 aa12.16□□□□□ -0.46
SHMT2-234ENST00000557703 TFAP2EQ6VUC0 442 aa12.16□□□□□ -0.46
SHMT2-234ENST00000557703 ZNF730Q6ZMV8 503 aa12.16□□□□□ -0.46
SHMT2-234ENST00000557703 WDR88Q6ZMY6 472 aa12.16□□□□□ -0.46
SHMT2-234ENST00000557703 Q6ZT83 130 aa12.16□□□□□ -0.46
SHMT2-234ENST00000557703 TMPRSS11FQ6ZWK6 438 aa12.16□□□□□ -0.46
SHMT2-234ENST00000557703 CREB3L2Q70SY1 520 aa12.16□□□□□ -0.46
SHMT2-234ENST00000557703 TSEN54Q7Z6J9 526 aaKnown RBP12.16□□□□□ -0.46
SHMT2-234ENST00000557703 CCDC103Q8IW40 242 aa12.16□□□□□ -0.46
SHMT2-234ENST00000557703 ZNF100Q8IYN0 542 aa12.16□□□□□ -0.46
SHMT2-234ENST00000557703 C10orf53Q8N6V4 93 aa12.16□□□□□ -0.46
SHMT2-234ENST00000557703 ZNF417Q8TAU3 575 aa12.16□□□□□ -0.46
SHMT2-234ENST00000557703 TMEM255BQ8WV15 326 aa12.16□□□□□ -0.46
SHMT2-234ENST00000557703 SGTBQ96EQ0 304 aa12.16□□□□□ -0.46
SHMT2-234ENST00000557703 ZNF587Q96SQ5 575 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-234ENST00000557703 UCK2Q9BZX2 261 aa12.16□□□□□ -0.46
SHMT2-234ENST00000557703 MEPEQ9NQ76 525 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-234ENST00000557703 MAN2C1Q9NTJ4 1040 aa12.16□□□□□ -0.46
SHMT2-234ENST00000557703 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-234ENST00000557703 SLC7A8Q9UHI5 535 aa12.16□□□□□ -0.46
SHMT2-234ENST00000557703 HCFC1P51610 2035 aa12.15□□□□□ -0.46
SHMT2-234ENST00000557703 A0A087WUU8 490 aa12.15□□□□□ -0.46
SHMT2-234ENST00000557703 IGHV3-15A0A0B4J1V0 119 aa12.15□□□□□ -0.46
SHMT2-234ENST00000557703 DHRS12A0PJE2 317 aa12.15□□□□□ -0.46
SHMT2-234ENST00000557703 PLPP3O14495 311 aa12.15□□□□□ -0.46
SHMT2-234ENST00000557703 SMNDC1O75940 238 aaKnown RBP eCLIP12.15□□□□□ -0.46
SHMT2-234ENST00000557703 OR7A10O76100 309 aa12.15□□□□□ -0.46
SHMT2-234ENST00000557703 GADD45GO95257 159 aa12.15□□□□□ -0.46
SHMT2-234ENST00000557703 CH25HO95992 272 aa12.15□□□□□ -0.46
SHMT2-234ENST00000557703 TSPAN19P0C672 248 aa12.15□□□□□ -0.46
SHMT2-234ENST00000557703 FUT1P19526 365 aa12.15□□□□□ -0.46
SHMT2-234ENST00000557703 PSMB1P20618 241 aaKnown RBP12.15□□□□□ -0.46
SHMT2-234ENST00000557703 PRPS1P60891 318 aa12.15□□□□□ -0.46
SHMT2-234ENST00000557703 SIRPAP78324 504 aa12.15□□□□□ -0.46
SHMT2-234ENST00000557703 C1DQ13901 141 aaKnown RBP12.15□□□□□ -0.46
SHMT2-234ENST00000557703 SP5Q6BEB4 398 aaPredicted RBP12.15□□□□□ -0.46
SHMT2-234ENST00000557703 PLXDC2Q6UX71 529 aa12.15□□□□□ -0.46
SHMT2-234ENST00000557703 GPAT4Q86UL3 456 aa12.15□□□□□ -0.46
SHMT2-234ENST00000557703 UEVLDQ8IX04 471 aa12.15□□□□□ -0.46
SHMT2-234ENST00000557703 FAM86B1Q8N7N1 296 aa12.15□□□□□ -0.46
SHMT2-234ENST00000557703 SLC7A13Q8TCU3 470 aa12.15□□□□□ -0.46
SHMT2-234ENST00000557703 APH1AQ96BI3 265 aa12.15□□□□□ -0.46
SHMT2-234ENST00000557703 BPIFA2Q96DR5 249 aa12.15□□□□□ -0.46
SHMT2-234ENST00000557703 CLPTM1LQ96KA5 538 aa12.15□□□□□ -0.46
SHMT2-234ENST00000557703 LRR1Q96L50 414 aa12.15□□□□□ -0.46
SHMT2-234ENST00000557703 ADAD1Q96M93 576 aaKnown RBP12.15□□□□□ -0.46
SHMT2-234ENST00000557703 NDRG3Q9UGV2 375 aa12.15□□□□□ -0.46
SHMT2-234ENST00000557703 TMCC3Q9ULS5 477 aa12.15□□□□□ -0.46
SHMT2-234ENST00000557703 GPR52Q9Y2T5 361 aa12.15□□□□□ -0.46
SHMT2-234ENST00000557703 FREM1Q5H8C1 2179 aa12.15□□□□□ -0.47
SHMT2-234ENST00000557703 ALPK2Q86TB3 2170 aa12.15□□□□□ -0.47
SHMT2-234ENST00000557703 SETXQ7Z333 2677 aaKnown RBP12.14□□□□□ -0.47
SHMT2-234ENST00000557703 TCRBV3S1A0A5B6 114 aa12.14□□□□□ -0.47
SHMT2-234ENST00000557703 NKX2-6A6NCS4 301 aa12.14□□□□□ -0.47
SHMT2-234ENST00000557703 ENO4A6NNW6 628 aa12.14□□□□□ -0.47
SHMT2-234ENST00000557703 CENPBD1B2RD01 187 aa12.14□□□□□ -0.47
SHMT2-234ENST00000557703 MS4A18H0YCH9 400 aa12.14□□□□□ -0.47
SHMT2-234ENST00000557703 C16orf97H3BN30 126 aa12.14□□□□□ -0.47
SHMT2-234ENST00000557703 J3KTA2 159 aa12.14□□□□□ -0.47
SHMT2-234ENST00000557703 CIB2O75838 187 aa12.14□□□□□ -0.47
SHMT2-234ENST00000557703 POU2F1P14859 743 aa12.14□□□□□ -0.47
SHMT2-234ENST00000557703 YAP1P46937 504 aaKnown RBP12.14□□□□□ -0.47
SHMT2-234ENST00000557703 UGT2B15P54855 530 aa12.14□□□□□ -0.47
SHMT2-234ENST00000557703 TGFBR3Q03167 851 aa12.14□□□□□ -0.47
SHMT2-234ENST00000557703 GABPB1Q06547 395 aaPredicted RBP12.14□□□□□ -0.47
SHMT2-234ENST00000557703 LTBQ06643 244 aa12.14□□□□□ -0.47
SHMT2-234ENST00000557703 ITGADQ13349 1161 aa12.14□□□□□ -0.47
SHMT2-234ENST00000557703 CDSNQ15517 529 aa12.14□□□□□ -0.47
SHMT2-234ENST00000557703 STK11Q15831 433 aa12.14□□□□□ -0.47
SHMT2-234ENST00000557703 MS4A18Q3C1V0 323 aa12.14□□□□□ -0.47
SHMT2-234ENST00000557703 FBXW9Q5XUX1 488 aa12.14□□□□□ -0.47
SHMT2-234ENST00000557703 ZNF474Q6S9Z5 364 aaPredicted RBP12.14□□□□□ -0.47
SHMT2-234ENST00000557703 NANOGNBQ7Z5D8 188 aa12.14□□□□□ -0.47
SHMT2-234ENST00000557703 P2RY8Q86VZ1 359 aa12.14□□□□□ -0.47
SHMT2-234ENST00000557703 DMRTC2Q8IXT2 367 aaPredicted RBP12.14□□□□□ -0.47
SHMT2-234ENST00000557703 ZNF610Q8N9Z0 462 aa12.14□□□□□ -0.47
SHMT2-234ENST00000557703 PAPD5Q8NDF8 572 aaKnown RBP12.14□□□□□ -0.47
SHMT2-234ENST00000557703 STEAP2Q8NFT2 490 aa12.14□□□□□ -0.47
SHMT2-234ENST00000557703 BOD1Q96IK1 185 aa12.14□□□□□ -0.47
SHMT2-234ENST00000557703 DACH2Q96NX9 599 aa12.14□□□□□ -0.47
SHMT2-234ENST00000557703 MOGAT1Q96PD6 335 aa12.14□□□□□ -0.47
SHMT2-234ENST00000557703 SEPHS2Q99611 448 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms