RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 TBC1D3LB9A6J9 549 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 ACOT7O00154 380 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 SURF4O15260 269 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 DLEU1O43261 78 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 UGT2B11O75310 529 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 KLF8O95600 359 aaPredicted RBP4.7□□□□□ -1.66
TMEM260-210ENST00000556422 IFNA2P01563 188 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 TBC1D3HP0C7X1 549 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 HTR1BP28222 390 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 NPY4RP50391 375 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 IL5RAQ01344 420 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 RGS1Q08116 209 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 AQP6Q13520 282 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 DCST1Q5T197 706 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 TBC1D3GQ6DHY5 549 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 ABLIM2Q6H8Q1 611 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 OR4C11Q6IEV9 310 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 MRM1Q6IN84 353 aaKnown RBP4.7□□□□□ -1.66
TMEM260-210ENST00000556422 TBC1D3CQ6IPX1 549 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 CLEC9AQ6UXN8 241 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 ZNF836Q6ZNA1 936 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 TBC1D3Q8IZP1 549 aaPredicted RBP4.7□□□□□ -1.66
TMEM260-210ENST00000556422 SLC5A8Q8N695 610 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 OR9Q2Q8NGE9 314 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 OR52J3Q8NH60 311 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 PHOSPHO1Q8TCT1 267 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 OR5P2Q8WZ92 322 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 RGMAQ96B86 450 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 RCC1LQ96I51 464 aaKnown RBP4.7□□□□□ -1.66
TMEM260-210ENST00000556422 BMFQ96LC9 184 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 DPH7Q9BTV6 452 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 GLIPR2Q9H4G4 154 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 MRPL15Q9P015 296 aaKnown RBP4.7□□□□□ -1.66
TMEM260-210ENST00000556422 NDOR1Q9UHB4 597 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 ORC6Q9Y5N6 252 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 HSPE1-MOB4S4R3N1 261 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 SPTBP11277 2137 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 HELTA6NFD8 242 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 KRBOX1C9JBD0 128 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 FAM227AF5H4B4 570 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 MAN2B1O00754 1011 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 ADAM20O43506 726 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 CTAG2O75638 210 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 IFNA10P01566 189 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 BCHEP06276 602 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 ABCD3P28288 659 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 DLSTP36957 453 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 HMGA2P52926 109 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 FGF8P55075 233 aaPredicted RBP4.69□□□□□ -1.66
TMEM260-210ENST00000556422 MANFP55145 182 aaKnown RBP4.69□□□□□ -1.66
TMEM260-210ENST00000556422 CDH11P55287 796 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 FUT5Q11128 374 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 RAB30Q15771 203 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 EXOC3L2Q2M3D2 409 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 GPR157Q5UAW9 335 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 ZNF770Q6IQ21 691 aaPredicted RBP4.69□□□□□ -1.66
TMEM260-210ENST00000556422 SLC27A4Q6P1M0 643 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 LRRN1Q6UXK5 716 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 KCTD9Q7L273 389 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 ADCK2Q7Z695 626 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 ZNF573Q86YE8 665 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 SLITRK4Q8IW52 837 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 SMRP1Q8NCR6 262 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 OR4D11Q8NGI4 311 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 C9orf43Q8TAL5 461 aaPredicted RBP4.69□□□□□ -1.66
TMEM260-210ENST00000556422 CPT1CQ8TCG5 803 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 DYNC2LI1Q8TCX1 351 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 RAB8BQ92930 207 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 CNRIP1Q96F85 164 aaPredicted RBP4.69□□□□□ -1.66
TMEM260-210ENST00000556422 TMEM19Q96HH6 336 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 MS4A3Q96HJ5 214 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 AMDHD1Q96NU7 426 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 NODALQ96S42 347 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 DIRC2Q96SL1 478 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 SPSB2Q99619 263 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 GDF15Q99988 308 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 CHRDQ9H2X0 955 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 KIR3DX1Q9H7L2 352 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 BCO1Q9HAY6 547 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 A4GALTQ9NPC4 353 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 C14orf119Q9NWQ9 140 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 MSRAQ9UJ68 235 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 ATG4BQ9Y4P1 393 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 WDR87Q6ZQQ6 2873 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 A0A1W2PR48 441 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 GLOD5A6NK44 160 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 M0R3G1 203 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 TNFRSF11BO00300 401 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 SLC43A1O75387 559 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 SOX30O94993 753 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 EPPINO95925 133 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 GIMD1P0DJR0 217 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 GABRB1P18505 474 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 TMBIM6P55061 237 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 CDH12P55289 794 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 ZNF616Q08AN1 781 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 NFATC3Q12968 1075 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 KCNMB1Q16558 191 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 CTF1Q16619 201 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 MICAQ29983 383 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms