RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 NIPAL3Q6P499 406 aa13.39□□□□□ -0.27
ACTN1-217ENST00000556203 CBLL1Q75N03 491 aa13.39□□□□□ -0.27
ACTN1-217ENST00000556203 SCAIQ8N9R8 606 aa13.39□□□□□ -0.27
ACTN1-217ENST00000556203 ADPRHL1Q8NDY3 354 aa13.39□□□□□ -0.27
ACTN1-217ENST00000556203 FAM162AQ96A26 154 aa13.39□□□□□ -0.27
ACTN1-217ENST00000556203 PRSS27Q9BQR3 290 aa13.39□□□□□ -0.27
ACTN1-217ENST00000556203 ZNF426Q9BUY5 554 aa13.39□□□□□ -0.27
ACTN1-217ENST00000556203 POLR2J2Q9GZM3 115 aaKnown RBP13.39□□□□□ -0.27
ACTN1-217ENST00000556203 POLR2J3Q9H1A7 115 aaKnown RBP13.39□□□□□ -0.27
ACTN1-217ENST00000556203 SLCO5A1Q9H2Y9 848 aa13.39□□□□□ -0.27
ACTN1-217ENST00000556203 EGFL7Q9UHF1 273 aa13.39□□□□□ -0.27
ACTN1-217ENST00000556203 PLEKHA6Q9Y2H5 1048 aa13.39□□□□□ -0.27
ACTN1-217ENST00000556203 CSMD1Q96PZ7 3565 aa13.39□□□□□ -0.27
ACTN1-217ENST00000556203 CSMD2Q7Z408 3487 aa13.38□□□□□ -0.27
ACTN1-217ENST00000556203 MS4A18H0YCH9 400 aa13.38□□□□□ -0.27
ACTN1-217ENST00000556203 PDLIM1O00151 329 aa13.38□□□□□ -0.27
ACTN1-217ENST00000556203 KRT33AO76009 404 aa13.38□□□□□ -0.27
ACTN1-217ENST00000556203 CH25HO95992 272 aa13.38□□□□□ -0.27
ACTN1-217ENST00000556203 MT-ATP6P00846 226 aa13.38□□□□□ -0.27
ACTN1-217ENST00000556203 LOXP28300 417 aaPredicted RBP13.38□□□□□ -0.27
ACTN1-217ENST00000556203 SLC25A3Q00325 362 aa13.38□□□□□ -0.27
ACTN1-217ENST00000556203 KRT72Q14CN4 511 aa13.38□□□□□ -0.27
ACTN1-217ENST00000556203 ZNF74Q16587 644 aa13.38□□□□□ -0.27
ACTN1-217ENST00000556203 MS4A18Q3C1V0 323 aa13.38□□□□□ -0.27
ACTN1-217ENST00000556203 TIMM23BQ5SRD1 257 aa13.38□□□□□ -0.27
ACTN1-217ENST00000556203 PAMR1Q6UXH9 720 aa13.38□□□□□ -0.27
ACTN1-217ENST00000556203 FKBP9P1Q75LS8 142 aa13.38□□□□□ -0.27
ACTN1-217ENST00000556203 NKAIN4Q8IVV8 208 aa13.38□□□□□ -0.27
ACTN1-217ENST00000556203 PGAM4Q8N0Y7 254 aa13.38□□□□□ -0.27
ACTN1-217ENST00000556203 FITM2Q8N6M3 262 aa13.38□□□□□ -0.27
ACTN1-217ENST00000556203 RNF148Q8N7C7 305 aa13.38□□□□□ -0.27
ACTN1-217ENST00000556203 POMGNT2Q8NAT1 580 aa13.38□□□□□ -0.27
ACTN1-217ENST00000556203 CCDC197Q8NCU1 140 aa13.38□□□□□ -0.27
ACTN1-217ENST00000556203 PLPPR2Q96GM1 343 aa13.38□□□□□ -0.27
ACTN1-217ENST00000556203 HSH2DQ96JZ2 352 aa13.38□□□□□ -0.27
ACTN1-217ENST00000556203 SLC19A3Q9BZV2 496 aa13.38□□□□□ -0.27
ACTN1-217ENST00000556203 MRPL39Q9NYK5 338 aaKnown RBP13.38□□□□□ -0.27
ACTN1-217ENST00000556203 ST6GALNAC2Q9UJ37 374 aa13.38□□□□□ -0.27
ACTN1-217ENST00000556203 RIMS3Q9UJD0 308 aa13.38□□□□□ -0.27
ACTN1-217ENST00000556203 ADAM21Q9UKJ8 722 aa13.38□□□□□ -0.27
ACTN1-217ENST00000556203 APCP25054 2843 aa13.37□□□□□ -0.27
ACTN1-217ENST00000556203 LOC102725191A0A1B0GVB3 256 aa13.37□□□□□ -0.27
ACTN1-217ENST00000556203 OR5H1A6NKK0 313 aa13.37□□□□□ -0.27
ACTN1-217ENST00000556203 PLPP3O14495 311 aa13.37□□□□□ -0.27
ACTN1-217ENST00000556203 HPRP00739 348 aa13.37□□□□□ -0.27
ACTN1-217ENST00000556203 IFNW1P05000 195 aa13.37□□□□□ -0.27
ACTN1-217ENST00000556203 HLA-DOBP13765 273 aa13.37□□□□□ -0.27
ACTN1-217ENST00000556203 TCN1P20061 433 aaPredicted RBP13.37□□□□□ -0.27
ACTN1-217ENST00000556203 AHCYP23526 432 aa13.37□□□□□ -0.27
ACTN1-217ENST00000556203 MPGP29372 298 aa13.37□□□□□ -0.27
ACTN1-217ENST00000556203 YAP1P46937 504 aaKnown RBP13.37□□□□□ -0.27
ACTN1-217ENST00000556203 NR1H2P55055 460 aa13.37□□□□□ -0.27
ACTN1-217ENST00000556203 MXRA7P84157 204 aa13.37□□□□□ -0.27
ACTN1-217ENST00000556203 LGALS3BPQ08380 585 aa13.37□□□□□ -0.27
ACTN1-217ENST00000556203 PPA1Q15181 289 aa13.37□□□□□ -0.27
ACTN1-217ENST00000556203 IFI44LQ53G44 452 aa13.37□□□□□ -0.27
ACTN1-217ENST00000556203 GLYATQ6IB77 296 aa13.37□□□□□ -0.27
ACTN1-217ENST00000556203 C16orf89Q6UX73 402 aa13.37□□□□□ -0.27
ACTN1-217ENST00000556203 UEVLDQ8IX04 471 aa13.37□□□□□ -0.27
ACTN1-217ENST00000556203 FAM156AQ8NDB6 213 aa13.37□□□□□ -0.27
ACTN1-217ENST00000556203 OR5J2Q8NH18 312 aa13.37□□□□□ -0.27
ACTN1-217ENST00000556203 TMEM255BQ8WV15 326 aa13.37□□□□□ -0.27
ACTN1-217ENST00000556203 GEMIN6Q8WXD5 167 aaKnown RBP13.37□□□□□ -0.27
ACTN1-217ENST00000556203 NINJ1Q92982 152 aa13.37□□□□□ -0.27
ACTN1-217ENST00000556203 MUCL1Q96DR8 90 aa13.37□□□□□ -0.27
ACTN1-217ENST00000556203 PRRC1Q96M27 445 aa13.37□□□□□ -0.27
ACTN1-217ENST00000556203 ALKBH3Q96Q83 286 aaPredicted RBP13.37□□□□□ -0.27
ACTN1-217ENST00000556203 AMBRA1Q9C0C7 1298 aa13.37□□□□□ -0.27
ACTN1-217ENST00000556203 FKRPQ9H9S5 495 aa13.37□□□□□ -0.27
ACTN1-217ENST00000556203 NANSQ9NR45 359 aa13.37□□□□□ -0.27
ACTN1-217ENST00000556203 EDARQ9UNE0 448 aa13.37□□□□□ -0.27
ACTN1-217ENST00000556203 RCE1Q9Y256 329 aa13.37□□□□□ -0.27
ACTN1-217ENST00000556203 DCHS2Q6V1P9 2916 aa13.36□□□□□ -0.27
ACTN1-217ENST00000556203 OR6C65A6NJZ3 312 aa13.36□□□□□ -0.27
ACTN1-217ENST00000556203 ENO4A6NNW6 628 aa13.36□□□□□ -0.27
ACTN1-217ENST00000556203 TRAF3IP2O43734 574 aaPredicted RBP13.36□□□□□ -0.27
ACTN1-217ENST00000556203 GMNNO75496 209 aa13.36□□□□□ -0.27
ACTN1-217ENST00000556203 UPK3AO75631 287 aa13.36□□□□□ -0.27
ACTN1-217ENST00000556203 ZNF432O94892 652 aa13.36□□□□□ -0.27
ACTN1-217ENST00000556203 OR6A2O95222 327 aa13.36□□□□□ -0.27
ACTN1-217ENST00000556203 THRBP10828 461 aa13.36□□□□□ -0.27
ACTN1-217ENST00000556203 CDH2P19022 906 aaPredicted RBP13.36□□□□□ -0.27
ACTN1-217ENST00000556203 DNASE1P24855 282 aa13.36□□□□□ -0.27
ACTN1-217ENST00000556203 IFNA8P32881 189 aa13.36□□□□□ -0.27
ACTN1-217ENST00000556203 RBM34P42696 430 aaKnown RBP13.36□□□□□ -0.27
ACTN1-217ENST00000556203 IST1P53990 364 aa13.36□□□□□ -0.27
ACTN1-217ENST00000556203 UGT2B15P54855 530 aa13.36□□□□□ -0.27
ACTN1-217ENST00000556203 POU3F1Q03052 451 aaPredicted RBP13.36□□□□□ -0.27
ACTN1-217ENST00000556203 PUDPQ08623 228 aa13.36□□□□□ -0.27
ACTN1-217ENST00000556203 ST3GAL3Q11203 375 aa13.36□□□□□ -0.27
ACTN1-217ENST00000556203 GABRA6Q16445 453 aa13.36□□□□□ -0.27
ACTN1-217ENST00000556203 SAMD4BQ5PRF9 694 aaKnown RBP13.36□□□□□ -0.27
ACTN1-217ENST00000556203 OR7E24Q6IFN5 339 aa13.36□□□□□ -0.27
ACTN1-217ENST00000556203 SEZ6L2Q6UXD5 910 aa13.36□□□□□ -0.27
ACTN1-217ENST00000556203 ABHD12BQ7Z5M8 362 aaPredicted RBP13.36□□□□□ -0.27
ACTN1-217ENST00000556203 P2RY8Q86VZ1 359 aa13.36□□□□□ -0.27
ACTN1-217ENST00000556203 RBM15BQ8NDT2 890 aaKnown RBP13.36□□□□□ -0.27
ACTN1-217ENST00000556203 OR52N5Q8NH56 324 aa13.36□□□□□ -0.27
ACTN1-217ENST00000556203 PFN4Q8NHR9 129 aa13.36□□□□□ -0.27
ACTN1-217ENST00000556203 TMEM239Q8WW34 195 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms