RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 SDHAP31040 664 aa22.05■■□□□ 1.12
TMEM260-207ENST00000555497 GDI2P50395 445 aaKnown RBP22.05■■□□□ 1.12
TMEM260-207ENST00000555497 GBX2P52951 348 aaPredicted RBP22.05■■□□□ 1.12
TMEM260-207ENST00000555497 C1QTNF12Q5T7M4 302 aa22.05■■□□□ 1.12
TMEM260-207ENST00000555497 JAZF1Q86VZ6 243 aa22.05■■□□□ 1.12
TMEM260-207ENST00000555497 SMIM19Q96E16 107 aa22.05■■□□□ 1.12
TMEM260-207ENST00000555497 GUCD1Q96NT3 240 aa22.05■■□□□ 1.12
TMEM260-207ENST00000555497 PCDHGB7Q9Y5F8 929 aa22.05■■□□□ 1.12
TMEM260-207ENST00000555497 COL6A3P12111 3177 aa22.05■■□□□ 1.12
TMEM260-207ENST00000555497 A0A1W2PPK0 400 aa22.04■■□□□ 1.12
TMEM260-207ENST00000555497 H7C1C5 153 aa22.04■■□□□ 1.12
TMEM260-207ENST00000555497 PSMD9O00233 223 aa22.04■■□□□ 1.12
TMEM260-207ENST00000555497 TOX3O15405 576 aaPredicted RBP22.04■■□□□ 1.12
TMEM260-207ENST00000555497 NUDT14O95848 222 aa22.04■■□□□ 1.12
TMEM260-207ENST00000555497 BGLAPP02818 100 aa22.04■■□□□ 1.12
TMEM260-207ENST00000555497 APEHP13798 732 aaKnown RBP22.04■■□□□ 1.12
TMEM260-207ENST00000555497 CASP3P42574 277 aa22.04■■□□□ 1.12
TMEM260-207ENST00000555497 CAPZA2P47755 286 aa22.04■■□□□ 1.12
TMEM260-207ENST00000555497 RPS11P62280 158 aaKnown RBP eCLIP22.04■■□□□ 1.12
TMEM260-207ENST00000555497 LCN6P62502 163 aa22.04■■□□□ 1.12
TMEM260-207ENST00000555497 TMEM53Q6P2H8 277 aa22.04■■□□□ 1.12
TMEM260-207ENST00000555497 C7orf57Q8NEG2 295 aa22.04■■□□□ 1.12
TMEM260-207ENST00000555497 SAP25Q8TEE9 199 aa22.04■■□□□ 1.12
TMEM260-207ENST00000555497 THAP4Q8WY91 577 aa22.04■■□□□ 1.12
TMEM260-207ENST00000555497 TSPAN32Q96QS1 320 aa22.04■■□□□ 1.12
TMEM260-207ENST00000555497 SRPK3Q9UPE1 567 aa22.04■■□□□ 1.12
TMEM260-207ENST00000555497 SLC6A5Q9Y345 797 aa22.04■■□□□ 1.12
TMEM260-207ENST00000555497 TNRC6BQ9UPQ9 1833 aaKnown RBP22.04■■□□□ 1.12
TMEM260-207ENST00000555497 A0A1B0GTQ1 180 aa22.04■■□□□ 1.12
TMEM260-207ENST00000555497 A0A1W2PPC1 479 aa22.04■■□□□ 1.12
TMEM260-207ENST00000555497 ZNF354AO60765 605 aaPredicted RBP22.04■■□□□ 1.12
TMEM260-207ENST00000555497 TXNDC12O95881 172 aa22.04■■□□□ 1.12
TMEM260-207ENST00000555497 CXCR1P25024 350 aa22.04■■□□□ 1.12
TMEM260-207ENST00000555497 SLC25A1P53007 311 aa22.04■■□□□ 1.12
TMEM260-207ENST00000555497 RNF4P78317 190 aa22.04■■□□□ 1.12
TMEM260-207ENST00000555497 NR0B2Q15466 257 aa22.04■■□□□ 1.12
TMEM260-207ENST00000555497 BCL2A1Q16548 175 aa22.04■■□□□ 1.12
TMEM260-207ENST00000555497 SLC25A35Q3KQZ1 300 aa22.04■■□□□ 1.12
TMEM260-207ENST00000555497 MESTQ5EB52 335 aa22.04■■□□□ 1.12
TMEM260-207ENST00000555497 NANOGNBQ7Z5D8 188 aa22.04■■□□□ 1.12
TMEM260-207ENST00000555497 MS4A15Q8N5U1 240 aa22.04■■□□□ 1.12
TMEM260-207ENST00000555497 SCAIQ8N9R8 606 aa22.04■■□□□ 1.12
TMEM260-207ENST00000555497 RASD1Q9Y272 281 aa22.04■■□□□ 1.12
TMEM260-207ENST00000555497 IGLV3-12A0A075B6K2 115 aa22.03■■□□□ 1.12
TMEM260-207ENST00000555497 PDGFBP01127 241 aaPredicted RBP22.03■■□□□ 1.12
TMEM260-207ENST00000555497 PNLIPP16233 465 aa22.03■■□□□ 1.12
TMEM260-207ENST00000555497 EVI2BP34910 448 aa22.03■■□□□ 1.12
TMEM260-207ENST00000555497 IL18Q14116 193 aa22.03■■□□□ 1.12
TMEM260-207ENST00000555497 CCDC92Q53HC0 331 aaPredicted RBP22.03■■□□□ 1.12
TMEM260-207ENST00000555497 PWWP2BQ6NUJ5 590 aa22.03■■□□□ 1.12
TMEM260-207ENST00000555497 SFXN4Q6P4A7 337 aa22.03■■□□□ 1.12
TMEM260-207ENST00000555497 METAP1DQ6UB28 335 aaPredicted RBP22.03■■□□□ 1.12
TMEM260-207ENST00000555497 RABEPKQ7Z6M1 372 aa22.03■■□□□ 1.12
TMEM260-207ENST00000555497 SYT9Q86SS6 491 aa22.03■■□□□ 1.12
TMEM260-207ENST00000555497 Q8N402 240 aa22.03■■□□□ 1.12
TMEM260-207ENST00000555497 ACOT12Q8WYK0 555 aa22.03■■□□□ 1.12
TMEM260-207ENST00000555497 RNF166Q96A37 237 aaPredicted RBP22.03■■□□□ 1.12
TMEM260-207ENST00000555497 PDCD1LG2Q9BQ51 273 aa22.03■■□□□ 1.12
TMEM260-207ENST00000555497 SRA1Q9HD15 236 aaKnown RBP22.03■■□□□ 1.12
TMEM260-207ENST00000555497 CPNE3O75131 537 aaKnown RBP22.03■■□□□ 1.12
TMEM260-207ENST00000555497 SLC2A2P11168 524 aaPredicted RBP22.03■■□□□ 1.12
TMEM260-207ENST00000555497 MYL9P24844 172 aa22.03■■□□□ 1.12
TMEM260-207ENST00000555497 OR2B6P58173 313 aa22.03■■□□□ 1.12
TMEM260-207ENST00000555497 SQSTM1Q13501 440 aa22.03■■□□□ 1.12
TMEM260-207ENST00000555497 NKAIN1Q4KMZ8 207 aa22.03■■□□□ 1.12
TMEM260-207ENST00000555497 PMS2CLQ68D20 193 aa22.03■■□□□ 1.12
TMEM260-207ENST00000555497 ANKRD37Q7Z713 158 aa22.03■■□□□ 1.12
TMEM260-207ENST00000555497 UBALD2Q8IYN6 164 aa22.03■■□□□ 1.12
TMEM260-207ENST00000555497 UBE2J2Q8N2K1 259 aa22.03■■□□□ 1.12
TMEM260-207ENST00000555497 APCDD1LQ8NCL9 501 aa22.03■■□□□ 1.12
TMEM260-207ENST00000555497 MMP28Q9H239 520 aa22.03■■□□□ 1.12
TMEM260-207ENST00000555497 FKRPQ9H9S5 495 aa22.03■■□□□ 1.12
TMEM260-207ENST00000555497 KLHDC2Q9Y2U9 406 aa22.03■■□□□ 1.12
TMEM260-207ENST00000555497 WDR87Q6ZQQ6 2873 aa22.03■■□□□ 1.12
TMEM260-207ENST00000555497 ADAMTS9Q9P2N4 1935 aa22.02■■□□□ 1.12
TMEM260-207ENST00000555497 IGHV5-10-1A0A0J9YXX1 117 aa22.02■■□□□ 1.12
TMEM260-207ENST00000555497 HLA-BQ31612 363 aa22.02■■□□□ 1.12
TMEM260-207ENST00000555497 ZNF684Q5T5D7 378 aa22.02■■□□□ 1.12
TMEM260-207ENST00000555497 NUP54Q7Z3B4 507 aa22.02■■□□□ 1.12
TMEM260-207ENST00000555497 AKAP14Q86UN6 197 aa22.02■■□□□ 1.12
TMEM260-207ENST00000555497 TPRA1Q86W33 373 aa22.02■■□□□ 1.12
TMEM260-207ENST00000555497 TEX19Q8NA77 164 aa22.02■■□□□ 1.12
TMEM260-207ENST00000555497 NFAM1Q8NET5 270 aaPredicted RBP22.02■■□□□ 1.12
TMEM260-207ENST00000555497 RELTQ969Z4 430 aa22.02■■□□□ 1.12
TMEM260-207ENST00000555497 SMAD5Q99717 465 aaKnown RBP22.02■■□□□ 1.12
TMEM260-207ENST00000555497 PTDSS2Q9BVG9 487 aa22.02■■□□□ 1.12
TMEM260-207ENST00000555497 DUSP23Q9BVJ7 150 aa22.02■■□□□ 1.12
TMEM260-207ENST00000555497 TAS2R5Q9NYW4 299 aa22.02■■□□□ 1.12
TMEM260-207ENST00000555497 GRHPRQ9UBQ7 328 aa22.02■■□□□ 1.12
TMEM260-207ENST00000555497 PILRBQ9UKJ0 227 aa22.02■■□□□ 1.12
TMEM260-207ENST00000555497 TRBV2A0A0J9YWF9 115 aa22.02■■□□□ 1.11
TMEM260-207ENST00000555497 FAM25AB3EWG3 89 aa22.02■■□□□ 1.11
TMEM260-207ENST00000555497 FAM25CB3EWG5 89 aa22.02■■□□□ 1.11
TMEM260-207ENST00000555497 FAM25GB3EWG6 89 aa22.02■■□□□ 1.11
TMEM260-207ENST00000555497 PAHP00439 452 aa22.02■■□□□ 1.11
TMEM260-207ENST00000555497 PGCP20142 388 aa22.02■■□□□ 1.11
TMEM260-207ENST00000555497 EDNRAP25101 427 aa22.02■■□□□ 1.11
TMEM260-207ENST00000555497 ACY1Q03154 408 aa22.02■■□□□ 1.11
TMEM260-207ENST00000555497 RPL22L1Q6P5R6 122 aaKnown RBP22.02■■□□□ 1.11
TMEM260-207ENST00000555497 UBQLNLQ8IYU4 475 aa22.02■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms