RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 N4BP2L2Q92802 583 aaPredicted RBP3.79□□□□□ -1.8
CKS1BP1-201ENST00000555221 UCN3Q969E3 161 aa3.79□□□□□ -1.8
CKS1BP1-201ENST00000555221 TCEANC2Q96MN5 208 aa3.79□□□□□ -1.8
CKS1BP1-201ENST00000555221 ZNF641Q96N77 438 aaPredicted RBP3.79□□□□□ -1.8
CKS1BP1-201ENST00000555221 PLEKHF1Q96S99 279 aa3.79□□□□□ -1.8
CKS1BP1-201ENST00000555221 P2RY13Q9BPV8 354 aa3.79□□□□□ -1.8
CKS1BP1-201ENST00000555221 MRPL45Q9BRJ2 306 aaKnown RBP3.79□□□□□ -1.8
CKS1BP1-201ENST00000555221 RIOK1Q9BRS2 568 aaKnown RBP3.79□□□□□ -1.8
CKS1BP1-201ENST00000555221 PDFQ9HBH1 243 aa3.79□□□□□ -1.8
CKS1BP1-201ENST00000555221 TRAF3IP3Q9Y228 551 aa3.79□□□□□ -1.8
CKS1BP1-201ENST00000555221 CDK13Q14004 1512 aaKnown RBP3.79□□□□□ -1.8
CKS1BP1-201ENST00000555221 EHBP1L1Q8N3D4 1523 aa3.79□□□□□ -1.8
CKS1BP1-201ENST00000555221 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.79□□□□□ -1.8
CKS1BP1-201ENST00000555221 ARHGAP23Q9P227 1491 aa3.79□□□□□ -1.8
CKS1BP1-201ENST00000555221 CNTLNQ9NXG0 1405 aa3.78□□□□□ -1.8
CKS1BP1-201ENST00000555221 PLEKHG1Q9ULL1 1385 aa3.78□□□□□ -1.8
CKS1BP1-201ENST00000555221 MAP3K4Q9Y6R4 1608 aa3.78□□□□□ -1.8
CKS1BP1-201ENST00000555221 CCDC182A6NF36 153 aa3.78□□□□□ -1.8
CKS1BP1-201ENST00000555221 HSD17B6O14756 317 aa3.78□□□□□ -1.8
CKS1BP1-201ENST00000555221 P04436 131 aa3.78□□□□□ -1.8
CKS1BP1-201ENST00000555221 HPNP05981 417 aa3.78□□□□□ -1.8
CKS1BP1-201ENST00000555221 CMA1P23946 247 aa3.78□□□□□ -1.8
CKS1BP1-201ENST00000555221 CXCR2P25025 360 aa3.78□□□□□ -1.8
CKS1BP1-201ENST00000555221 GLP1RP43220 463 aa3.78□□□□□ -1.8
CKS1BP1-201ENST00000555221 ATP5IP56385 69 aaPredicted RBP3.78□□□□□ -1.8
CKS1BP1-201ENST00000555221 WNT4P56705 351 aa3.78□□□□□ -1.8
CKS1BP1-201ENST00000555221 OR5I1Q13606 314 aa3.78□□□□□ -1.8
CKS1BP1-201ENST00000555221 NSDHLQ15738 373 aa3.78□□□□□ -1.8
CKS1BP1-201ENST00000555221 IL17AQ16552 155 aa3.78□□□□□ -1.8
CKS1BP1-201ENST00000555221 KRT71Q3SY84 523 aa3.78□□□□□ -1.8
CKS1BP1-201ENST00000555221 BCL7AQ4VC05 210 aa3.78□□□□□ -1.8
CKS1BP1-201ENST00000555221 C6orf226Q5I0X4 101 aa3.78□□□□□ -1.8
CKS1BP1-201ENST00000555221 C1orf100Q5SVJ3 147 aa3.78□□□□□ -1.8
CKS1BP1-201ENST00000555221 MARCH8Q5T0T0 291 aa3.78□□□□□ -1.8
CKS1BP1-201ENST00000555221 ENPP6Q6UWR7 440 aa3.78□□□□□ -1.8
CKS1BP1-201ENST00000555221 TMIGD1Q6UXZ0 262 aa3.78□□□□□ -1.8
CKS1BP1-201ENST00000555221 Q6ZN92 141 aa3.78□□□□□ -1.8
CKS1BP1-201ENST00000555221 SLC26A11Q86WA9 606 aa3.78□□□□□ -1.8
CKS1BP1-201ENST00000555221 UBE2J2Q8N2K1 259 aa3.78□□□□□ -1.8
CKS1BP1-201ENST00000555221 NECAB1Q8N987 351 aa3.78□□□□□ -1.8
CKS1BP1-201ENST00000555221 NEIL3Q8TAT5 605 aa3.78□□□□□ -1.8
CKS1BP1-201ENST00000555221 DCUN1D4Q92564 292 aa3.78□□□□□ -1.8
CKS1BP1-201ENST00000555221 TM4SF19Q96DZ7 209 aa3.78□□□□□ -1.8
CKS1BP1-201ENST00000555221 TMEM101Q96IK0 257 aa3.78□□□□□ -1.8
CKS1BP1-201ENST00000555221 IFT74Q96LB3 600 aa3.78□□□□□ -1.8
CKS1BP1-201ENST00000555221 TRIM62Q9BVG3 475 aa3.78□□□□□ -1.8
CKS1BP1-201ENST00000555221 ROPN1BQ9BZX4 212 aaPredicted RBP3.78□□□□□ -1.8
CKS1BP1-201ENST00000555221 C20orf85Q9H1P6 137 aa3.78□□□□□ -1.8
CKS1BP1-201ENST00000555221 NIPAL2Q9H841 368 aa3.78□□□□□ -1.8
CKS1BP1-201ENST00000555221 SUN2Q9UH99 717 aa3.78□□□□□ -1.8
CKS1BP1-201ENST00000555221 NCOA2Q15596 1464 aa3.78□□□□□ -1.8
CKS1BP1-201ENST00000555221 C9orf84Q5VXU9 1444 aa3.78□□□□□ -1.8
CKS1BP1-201ENST00000555221 ADAMTS9Q9P2N4 1935 aa3.78□□□□□ -1.81
CKS1BP1-201ENST00000555221 OR5B21A6NL26 309 aa3.77□□□□□ -1.81
CKS1BP1-201ENST00000555221 GFYI3L273 518 aa3.77□□□□□ -1.81
CKS1BP1-201ENST00000555221 HAS3O00219 553 aa3.77□□□□□ -1.81
CKS1BP1-201ENST00000555221 SUPT7LO94864 414 aa3.77□□□□□ -1.81
CKS1BP1-201ENST00000555221 SNX4O95219 450 aa3.77□□□□□ -1.81
CKS1BP1-201ENST00000555221 CD1CP29017 333 aa3.77□□□□□ -1.81
CKS1BP1-201ENST00000555221 PRDX3P30048 256 aaKnown RBP3.77□□□□□ -1.81
CKS1BP1-201ENST00000555221 GYG1P46976 350 aa3.77□□□□□ -1.81
CKS1BP1-201ENST00000555221 ARRB1P49407 418 aaPredicted RBP3.77□□□□□ -1.81
CKS1BP1-201ENST00000555221 DLX1P56177 255 aa3.77□□□□□ -1.81
CKS1BP1-201ENST00000555221 TAS2R19P59542 299 aa3.77□□□□□ -1.81
CKS1BP1-201ENST00000555221 TGFBR3Q03167 851 aa3.77□□□□□ -1.81
CKS1BP1-201ENST00000555221 MRPL28Q13084 256 aaKnown RBP3.77□□□□□ -1.81
CKS1BP1-201ENST00000555221 PLD1Q13393 1074 aa3.77□□□□□ -1.81
CKS1BP1-201ENST00000555221 GNMTQ14749 295 aa3.77□□□□□ -1.81
CKS1BP1-201ENST00000555221 HERPUD1Q15011 391 aa3.77□□□□□ -1.81
CKS1BP1-201ENST00000555221 PRSS41Q7RTY9 318 aa3.77□□□□□ -1.81
CKS1BP1-201ENST00000555221 NANOGNBQ7Z5D8 188 aa3.77□□□□□ -1.81
CKS1BP1-201ENST00000555221 ECHDC2Q86YB7 292 aa3.77□□□□□ -1.81
CKS1BP1-201ENST00000555221 C6orf223Q8N319 242 aa3.77□□□□□ -1.81
CKS1BP1-201ENST00000555221 FNDC5Q8NAU1 212 aa3.77□□□□□ -1.81
CKS1BP1-201ENST00000555221 FBXO32Q969P5 355 aa3.77□□□□□ -1.81
CKS1BP1-201ENST00000555221 CMTM7Q96FZ5 175 aa3.77□□□□□ -1.81
CKS1BP1-201ENST00000555221 OXGR1Q96P68 337 aa3.77□□□□□ -1.81
CKS1BP1-201ENST00000555221 ZIM3Q96PE6 472 aa3.77□□□□□ -1.81
CKS1BP1-201ENST00000555221 MYCBPQ99417 103 aaPredicted RBP3.77□□□□□ -1.81
CKS1BP1-201ENST00000555221 TSG101Q99816 390 aa3.77□□□□□ -1.81
CKS1BP1-201ENST00000555221 NAT9Q9BTE0 207 aa3.77□□□□□ -1.81
CKS1BP1-201ENST00000555221 PKIBQ9C010 78 aa3.77□□□□□ -1.81
CKS1BP1-201ENST00000555221 ACTR6Q9GZN1 396 aa3.77□□□□□ -1.81
CKS1BP1-201ENST00000555221 NMRAL1Q9HBL8 299 aa3.77□□□□□ -1.81
CKS1BP1-201ENST00000555221 HOXC10Q9NYD6 342 aa3.77□□□□□ -1.81
CKS1BP1-201ENST00000555221 KCNIP1Q9NZI2 227 aa3.77□□□□□ -1.81
CKS1BP1-201ENST00000555221 ZNF639Q9UID6 485 aa3.77□□□□□ -1.81
CKS1BP1-201ENST00000555221 KIF13AQ9H1H9 1805 aa3.77□□□□□ -1.81
CKS1BP1-201ENST00000555221 FANCIQ9NVI1 1328 aa3.76□□□□□ -1.81
CKS1BP1-201ENST00000555221 TSPOAP1O95153 1857 aa3.76□□□□□ -1.81
CKS1BP1-201ENST00000555221 CCDC141Q6ZP82 1450 aa3.76□□□□□ -1.81
CKS1BP1-201ENST00000555221 NSG1A0A0A6YYJ2 146 aa3.76□□□□□ -1.81
CKS1BP1-201ENST00000555221 PSMB11A5LHX3 300 aa3.76□□□□□ -1.81
CKS1BP1-201ENST00000555221 BTBD17A6NE02 478 aa3.76□□□□□ -1.81
CKS1BP1-201ENST00000555221 AGPAT2O15120 278 aa3.76□□□□□ -1.81
CKS1BP1-201ENST00000555221 TOM1O60784 492 aa3.76□□□□□ -1.81
CKS1BP1-201ENST00000555221 DNAH10OSP0CZ25 163 aa3.76□□□□□ -1.81
CKS1BP1-201ENST00000555221 TBPP20226 339 aa3.76□□□□□ -1.81
CKS1BP1-201ENST00000555221 FUT3P21217 361 aa3.76□□□□□ -1.81
CKS1BP1-201ENST00000555221 CD1BP29016 333 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms