RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 EMC3Q9P0I2 261 aa10.91□□□□□ -0.66
SYNE2-214ENST00000554928 PRR14LQ5THK1 2151 aa10.9□□□□□ -0.66
SYNE2-214ENST00000554928 ENO4A6NNW6 628 aa10.9□□□□□ -0.66
SYNE2-214ENST00000554928 DEFB108AA8MXU0 73 aa10.9□□□□□ -0.66
SYNE2-214ENST00000554928 GPR171O14626 319 aa10.9□□□□□ -0.66
SYNE2-214ENST00000554928 TRAF3IP2O43734 574 aaPredicted RBP10.9□□□□□ -0.66
SYNE2-214ENST00000554928 MRPL33O75394 65 aaKnown RBP10.9□□□□□ -0.66
SYNE2-214ENST00000554928 DIRAS1O95057 198 aa10.9□□□□□ -0.66
SYNE2-214ENST00000554928 PSMB1P20618 241 aaKnown RBP10.9□□□□□ -0.66
SYNE2-214ENST00000554928 CALB2P22676 271 aa10.9□□□□□ -0.66
SYNE2-214ENST00000554928 LOXP28300 417 aaPredicted RBP10.9□□□□□ -0.66
SYNE2-214ENST00000554928 PCYT1AP49585 367 aa10.9□□□□□ -0.66
SYNE2-214ENST00000554928 DAZAP2Q15038 168 aaPredicted RBP10.9□□□□□ -0.66
SYNE2-214ENST00000554928 ZNF74Q16587 644 aa10.9□□□□□ -0.66
SYNE2-214ENST00000554928 IQCCQ4KMZ1 466 aa10.9□□□□□ -0.66
SYNE2-214ENST00000554928 SAMD4BQ5PRF9 694 aaKnown RBP10.9□□□□□ -0.66
SYNE2-214ENST00000554928 SFRP5Q5T4F7 317 aa10.9□□□□□ -0.66
SYNE2-214ENST00000554928 C9orf135Q5VTT2 229 aa10.9□□□□□ -0.66
SYNE2-214ENST00000554928 TTC33Q6PID6 262 aaPredicted RBP10.9□□□□□ -0.66
SYNE2-214ENST00000554928 SEZ6L2Q6UXD5 910 aa10.9□□□□□ -0.66
SYNE2-214ENST00000554928 Q6ZT83 130 aa10.9□□□□□ -0.66
SYNE2-214ENST00000554928 FKBP9P1Q75LS8 142 aa10.9□□□□□ -0.66
SYNE2-214ENST00000554928 H1FNTQ75WM6 255 aaPredicted RBP10.9□□□□□ -0.66
SYNE2-214ENST00000554928 LINGO2Q7L985 606 aa10.9□□□□□ -0.66
SYNE2-214ENST00000554928 AAED1Q7RTV5 226 aa10.9□□□□□ -0.66
SYNE2-214ENST00000554928 TRPM8Q7Z2W7 1104 aa10.9□□□□□ -0.66
SYNE2-214ENST00000554928 STK32CQ86UX6 486 aa10.9□□□□□ -0.66
SYNE2-214ENST00000554928 TMEM200AQ86VY9 491 aa10.9□□□□□ -0.66
SYNE2-214ENST00000554928 ANKK1Q8NFD2 765 aa10.9□□□□□ -0.66
SYNE2-214ENST00000554928 GEMIN6Q8WXD5 167 aaKnown RBP10.9□□□□□ -0.66
SYNE2-214ENST00000554928 TMEM45BQ96B21 275 aa10.9□□□□□ -0.66
SYNE2-214ENST00000554928 APH1AQ96BI3 265 aa10.9□□□□□ -0.66
SYNE2-214ENST00000554928 TXNDC15Q96J42 360 aa10.9□□□□□ -0.66
SYNE2-214ENST00000554928 C7orf34Q96L11 122 aa10.9□□□□□ -0.66
SYNE2-214ENST00000554928 PRRC1Q96M27 445 aa10.9□□□□□ -0.66
SYNE2-214ENST00000554928 DACH2Q96NX9 599 aa10.9□□□□□ -0.66
SYNE2-214ENST00000554928 MED18Q9BUE0 208 aa10.9□□□□□ -0.66
SYNE2-214ENST00000554928 SF3B5Q9BWJ5 86 aaKnown RBP10.9□□□□□ -0.66
SYNE2-214ENST00000554928 LIME1Q9H400 295 aa10.9□□□□□ -0.66
SYNE2-214ENST00000554928 TAS2R1Q9NYW7 299 aa10.9□□□□□ -0.66
SYNE2-214ENST00000554928 RASD1Q9Y272 281 aa10.9□□□□□ -0.66
SYNE2-214ENST00000554928 hCG_2039718K7EN88 272 aa10.89□□□□□ -0.67
SYNE2-214ENST00000554928 PDLIM1O00151 329 aa10.89□□□□□ -0.67
SYNE2-214ENST00000554928 PLPP3O14495 311 aa10.89□□□□□ -0.67
SYNE2-214ENST00000554928 OR2T1O43869 369 aa10.89□□□□□ -0.67
SYNE2-214ENST00000554928 UPK3AO75631 287 aa10.89□□□□□ -0.67
SYNE2-214ENST00000554928 HRGP04196 525 aa10.89□□□□□ -0.67
SYNE2-214ENST00000554928 SEMG1P04279 462 aa10.89□□□□□ -0.67
SYNE2-214ENST00000554928 IFNW1P05000 195 aa10.89□□□□□ -0.67
SYNE2-214ENST00000554928 ITGA5P08648 1049 aa10.89□□□□□ -0.67
SYNE2-214ENST00000554928 COX5AP20674 150 aa10.89□□□□□ -0.67
SYNE2-214ENST00000554928 GTF2E2P29084 291 aaKnown RBP10.89□□□□□ -0.67
SYNE2-214ENST00000554928 CLDN17P56750 224 aa10.89□□□□□ -0.67
SYNE2-214ENST00000554928 VLDLRP98155 873 aa10.89□□□□□ -0.67
SYNE2-214ENST00000554928 MS4A2Q01362 244 aa10.89□□□□□ -0.67
SYNE2-214ENST00000554928 FAPQ12884 760 aa10.89□□□□□ -0.67
SYNE2-214ENST00000554928 PHYHD1Q5SRE7 291 aa10.89□□□□□ -0.67
SYNE2-214ENST00000554928 FBXW9Q5XUX1 488 aa10.89□□□□□ -0.67
SYNE2-214ENST00000554928 ALKBH2Q6NS38 261 aa10.89□□□□□ -0.67
SYNE2-214ENST00000554928 NIPAL3Q6P499 406 aa10.89□□□□□ -0.67
SYNE2-214ENST00000554928 TBPL2Q6SJ96 375 aa10.89□□□□□ -0.67
SYNE2-214ENST00000554928 C5orf46Q6UWT4 87 aa10.89□□□□□ -0.67
SYNE2-214ENST00000554928 CYP2R1Q6VVX0 501 aa10.89□□□□□ -0.67
SYNE2-214ENST00000554928 BHLHA15Q7RTS1 189 aaPredicted RBP10.89□□□□□ -0.67
SYNE2-214ENST00000554928 UBE2J2Q8N2K1 259 aa10.89□□□□□ -0.67
SYNE2-214ENST00000554928 ZNF433Q8N7K0 673 aaPredicted RBP10.89□□□□□ -0.67
SYNE2-214ENST00000554928 OR6S1Q8NH40 331 aa10.89□□□□□ -0.67
SYNE2-214ENST00000554928 TMEM239Q8WW34 195 aa10.89□□□□□ -0.67
SYNE2-214ENST00000554928 LZICQ8WZA0 190 aa10.89□□□□□ -0.67
SYNE2-214ENST00000554928 MPP4Q96JB8 637 aa10.89□□□□□ -0.67
SYNE2-214ENST00000554928 OXGR1Q96P68 337 aa10.89□□□□□ -0.67
SYNE2-214ENST00000554928 EPYCQ99645 322 aa10.89□□□□□ -0.67
SYNE2-214ENST00000554928 GORASP2Q9H8Y8 452 aa10.89□□□□□ -0.67
SYNE2-214ENST00000554928 RASSF1Q9NS23 344 aa10.89□□□□□ -0.67
SYNE2-214ENST00000554928 MED29Q9NX70 200 aa10.89□□□□□ -0.67
SYNE2-214ENST00000554928 MRPL39Q9NYK5 338 aaKnown RBP10.89□□□□□ -0.67
SYNE2-214ENST00000554928 NDUFAF4Q9P032 175 aa10.89□□□□□ -0.67
SYNE2-214ENST00000554928 GPR52Q9Y2T5 361 aa10.89□□□□□ -0.67
SYNE2-214ENST00000554928 POLQO75417 2590 aa10.89□□□□□ -0.67
SYNE2-214ENST00000554928 HRNRQ86YZ3 2850 aaPredicted RBP10.89□□□□□ -0.67
SYNE2-214ENST00000554928 PDZD2O15018 2839 aa10.88□□□□□ -0.67
SYNE2-214ENST00000554928 A0A1W2PR80 420 aa10.88□□□□□ -0.67
SYNE2-214ENST00000554928 C11orf98E9PRG8 122 aa10.88□□□□□ -0.67
SYNE2-214ENST00000554928 MAST4O15021 2626 aa10.88□□□□□ -0.67
SYNE2-214ENST00000554928 KLF4O43474 513 aa10.88□□□□□ -0.67
SYNE2-214ENST00000554928 RAD51DO75771 328 aa10.88□□□□□ -0.67
SYNE2-214ENST00000554928 SERPINI2O75830 405 aa10.88□□□□□ -0.67
SYNE2-214ENST00000554928 ZNF432O94892 652 aa10.88□□□□□ -0.67
SYNE2-214ENST00000554928 ASAH2BP0C7U1 165 aa10.88□□□□□ -0.67
SYNE2-214ENST00000554928 NQO1P15559 274 aaKnown RBP10.88□□□□□ -0.67
SYNE2-214ENST00000554928 CRYGSP22914 178 aa10.88□□□□□ -0.67
SYNE2-214ENST00000554928 DNAJA1P31689 397 aaKnown RBP10.88□□□□□ -0.67
SYNE2-214ENST00000554928 PEX19P40855 299 aa10.88□□□□□ -0.67
SYNE2-214ENST00000554928 IL1RL1Q01638 556 aa10.88□□□□□ -0.67
SYNE2-214ENST00000554928 ITGADQ13349 1161 aa10.88□□□□□ -0.67
SYNE2-214ENST00000554928 PMS2P3Q13401 168 aa10.88□□□□□ -0.67
SYNE2-214ENST00000554928 TAB1Q15750 504 aa10.88□□□□□ -0.67
SYNE2-214ENST00000554928 CDC20BQ86Y33 519 aa10.88□□□□□ -0.67
SYNE2-214ENST00000554928 WFDC8Q8IUA0 241 aa10.88□□□□□ -0.67
SYNE2-214ENST00000554928 OFCC1Q8IZS5 231 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms