RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 BTBD9Q96Q07 612 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 MTERF1Q99551 399 aaKnown RBP4.25□□□□□ -1.73
ATXN3-228ENST00000554592 SERPINI1Q99574 410 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 BAG1Q99933 345 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-228ENST00000554592 POTEKPQ9BYX7 375 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 AAMDCQ9H7C9 122 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 SMYD2Q9NRG4 433 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 SNTG1Q9NSN8 517 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 C20orf141Q9NUB4 165 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 ARGLU1Q9NWB6 273 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-228ENST00000554592 TMEM45AQ9NWC5 275 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 AHSPQ9NZD4 102 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 MAT2BQ9NZL9 334 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 KIAA1456Q9P272 454 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 ASIC3Q9UHC3 531 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 CES1P1Q9UKY3 287 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 MGAT4BQ9UQ53 548 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 PSAT1Q9Y617 370 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 NINQ8N4C6 2090 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 DOCK7Q96N67 2140 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 A0A087WZY1 265 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 GOLGA8QA0A0J9YX86 632 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 C1orf226A1L170 272 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 GOLGA8OA6NCC3 632 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 GOLGA8NF8WBI6 632 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 GOLGA8RI6L899 631 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 IFNL4K9M1U5 179 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 ABCD4O14678 606 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 SCO2O43819 266 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 CXCL13O43927 109 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 FADS1O60427 444 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 ERAL1O75616 437 aaKnown RBP4.24□□□□□ -1.73
ATXN3-228ENST00000554592 SEMA3DO95025 777 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 VENTXO95231 258 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 WISP3O95389 354 aaPredicted RBP4.24□□□□□ -1.73
ATXN3-228ENST00000554592 KLK1P06870 262 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 YES1P07947 543 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 CCDC166P0CW27 439 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 CD1DP15813 335 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 AGTR1P30556 359 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 EVI2BP34910 448 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 FEN1P39748 380 aaKnown RBP4.24□□□□□ -1.73
ATXN3-228ENST00000554592 ARL1P40616 181 aaPredicted RBP4.24□□□□□ -1.73
ATXN3-228ENST00000554592 NR4A2P43354 598 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 CARD18P57730 90 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 GPX6P59796 221 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 ACTG1P63261 375 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 DEFA6Q01524 100 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 FRG1Q14331 258 aaKnown RBP4.24□□□□□ -1.73
ATXN3-228ENST00000554592 PPA1Q15181 289 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 RNPS1Q15287 305 aaKnown RBP4.24□□□□□ -1.73
ATXN3-228ENST00000554592 OR4D1Q15615 310 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 TMEM44Q2T9K0 475 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 IQCCQ4KMZ1 466 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 TIMM23BQ5SRD1 257 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 CCNYL2Q5T2Q4 361 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 CPTPQ5TA50 214 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 RNASEH2BQ5TBB1 312 aaKnown RBP4.24□□□□□ -1.73
ATXN3-228ENST00000554592 ASPHD1Q5U4P2 390 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 MORN5Q5VZ52 161 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 ZNF544Q6NX49 715 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 SLC48A1Q6P1K1 146 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 TTC27Q6P3X3 843 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 CFAP161Q6P656 301 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 TFAP2EQ6VUC0 442 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 RRM2BQ7LG56 351 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 BHLHA15Q7RTS1 189 aaPredicted RBP4.24□□□□□ -1.73
ATXN3-228ENST00000554592 PAGE2Q7Z2X7 111 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 GALNT10Q86SR1 603 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 IGFN1Q86VF2 1251 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 TDRPQ86YL5 185 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 C11orf65Q8NCR3 313 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 OR4N2Q8NGD1 307 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 OR2V1Q8NHB1 315 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 STAG3L4Q8TBR4 150 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 FAM216AQ8WUB2 273 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 OSTF1Q92882 214 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 ADGRG7Q96K78 797 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 VSTM2LQ96N03 204 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 DESI2Q9BSY9 194 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 RHOJQ9H4E5 214 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 ZNF696Q9H7X3 374 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 PLAC1Q9HBJ0 212 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 HHATLQ9HCP6 504 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 TIGARQ9NQ88 270 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 KRT84Q9NSB2 600 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 NSMCE4AQ9NXX6 385 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 OPTCQ9UBM4 332 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 POU2F3Q9UKI9 436 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 PRDM4Q9UKN5 801 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 GUCA1BQ9UMX6 200 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 ABCG2Q9UNQ0 655 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 OR10H1Q9Y4A9 318 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 ANGPTL3Q9Y5C1 460 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 PCDHGB5Q9Y5G0 923 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 ZNF780BQ9Y6R6 833 aa4.24□□□□□ -1.73
ATXN3-228ENST00000554592 RAI1Q7Z5J4 1906 aaPredicted RBP4.24□□□□□ -1.73
ATXN3-228ENST00000554592 IGLV3-32A0A0A0MS00 114 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 IGHV4-61A0A0C4DH41 118 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 A0A0J9YW62 118 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms