RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 PRAMEF26H0Y7S4 382 aa8.78□□□□□ -1
SIX4-202ENST00000554079 FLRT2O43155 660 aa8.78□□□□□ -1
SIX4-202ENST00000554079 CYTIPO60759 359 aa8.78□□□□□ -1
SIX4-202ENST00000554079 PRAMEF4O60810 478 aa8.78□□□□□ -1
SIX4-202ENST00000554079 SERPINA5P05154 406 aa8.78□□□□□ -1
SIX4-202ENST00000554079 CSF2RAP15509 400 aa8.78□□□□□ -1
SIX4-202ENST00000554079 MC4RP32245 332 aa8.78□□□□□ -1
SIX4-202ENST00000554079 ATP6V1E1P36543 226 aa8.78□□□□□ -1
SIX4-202ENST00000554079 OR1G1P47890 313 aa8.78□□□□□ -1
SIX4-202ENST00000554079 ZNF84P51523 738 aa8.78□□□□□ -1
SIX4-202ENST00000554079 TTC3P53804 2025 aa8.78□□□□□ -1
SIX4-202ENST00000554079 ATP1B3P54709 279 aa8.78□□□□□ -1
SIX4-202ENST00000554079 SOX8P57073 446 aa8.78□□□□□ -1
SIX4-202ENST00000554079 HBA1P69905 142 aa8.78□□□□□ -1
SIX4-202ENST00000554079 TSPAN31Q12999 210 aa8.78□□□□□ -1
SIX4-202ENST00000554079 ATXN7L3Q14CW9 347 aaPredicted RBP8.78□□□□□ -1
SIX4-202ENST00000554079 PNLIPRP3Q17RR3 467 aa8.78□□□□□ -1
SIX4-202ENST00000554079 ACSM3Q53FZ2 586 aa8.78□□□□□ -1
SIX4-202ENST00000554079 UBXN11Q5T124 520 aa8.78□□□□□ -1
SIX4-202ENST00000554079 C9orf64Q5T6V5 341 aa8.78□□□□□ -1
SIX4-202ENST00000554079 PRAMEF9Q5VWM5 478 aa8.78□□□□□ -1
SIX4-202ENST00000554079 NDUFAF7Q7L592 441 aa8.78□□□□□ -1
SIX4-202ENST00000554079 IQCHQ86VS3 1027 aa8.78□□□□□ -1
SIX4-202ENST00000554079 BAP18Q8IXM2 172 aa8.78□□□□□ -1
SIX4-202ENST00000554079 ZNF248Q8NDW4 579 aa8.78□□□□□ -1
SIX4-202ENST00000554079 C17orf47Q8NEP4 570 aa8.78□□□□□ -1
SIX4-202ENST00000554079 OR4K5Q8NGD3 323 aa8.78□□□□□ -1
SIX4-202ENST00000554079 OR13C5Q8NGS8 318 aa8.78□□□□□ -1
SIX4-202ENST00000554079 LKAAEAR1Q8TD35 194 aa8.78□□□□□ -1
SIX4-202ENST00000554079 OR8D1Q8WZ84 308 aa8.78□□□□□ -1
SIX4-202ENST00000554079 ZNF775Q96BV0 537 aaPredicted RBP8.78□□□□□ -1
SIX4-202ENST00000554079 FOXRED1Q96CU9 486 aaPredicted RBP8.78□□□□□ -1
SIX4-202ENST00000554079 KIRREL1Q96J84 757 aa8.78□□□□□ -1
SIX4-202ENST00000554079 FCRL2Q96LA5 508 aaPredicted RBP8.78□□□□□ -1
SIX4-202ENST00000554079 FCRL4Q96PJ5 515 aa8.78□□□□□ -1
SIX4-202ENST00000554079 OR5B2Q96R09 309 aa8.78□□□□□ -1
SIX4-202ENST00000554079 INSM2Q96T92 566 aaPredicted RBP8.78□□□□□ -1
SIX4-202ENST00000554079 SULT4A1Q9BR01 284 aa8.78□□□□□ -1
SIX4-202ENST00000554079 HRH4Q9H3N8 390 aa8.78□□□□□ -1
SIX4-202ENST00000554079 CYTL1Q9NRR1 136 aa8.78□□□□□ -1
SIX4-202ENST00000554079 ADARB2Q9NS39 739 aaKnown RBP8.78□□□□□ -1
SIX4-202ENST00000554079 ANKRD10Q9NXR5 420 aa8.78□□□□□ -1
SIX4-202ENST00000554079 HDGFL3Q9Y3E1 203 aa8.78□□□□□ -1
SIX4-202ENST00000554079 SMIM28A0A1B0GU29 152 aa8.77□□□□□ -1.01
SIX4-202ENST00000554079 SLC5A10A0PJK1 596 aa8.77□□□□□ -1.01
SIX4-202ENST00000554079 ANTXRLA6NF34 631 aa8.77□□□□□ -1.01
SIX4-202ENST00000554079 HHLA1C9JL84 531 aa8.77□□□□□ -1.01
SIX4-202ENST00000554079 ACOT7O00154 380 aa8.77□□□□□ -1.01
SIX4-202ENST00000554079 ITGB1BP1O14713 200 aa8.77□□□□□ -1.01
SIX4-202ENST00000554079 GPR182O15218 404 aa8.77□□□□□ -1.01
SIX4-202ENST00000554079 PRAMEF12O95522 483 aa8.77□□□□□ -1.01
SIX4-202ENST00000554079 IL3P08700 152 aa8.77□□□□□ -1.01
SIX4-202ENST00000554079 METTL15P1P0C7V9 234 aa8.77□□□□□ -1.01
SIX4-202ENST00000554079 FGF7P21781 194 aa8.77□□□□□ -1.01
SIX4-202ENST00000554079 DPP4P27487 766 aa8.77□□□□□ -1.01
SIX4-202ENST00000554079 CD80P33681 288 aa8.77□□□□□ -1.01
SIX4-202ENST00000554079 PPM1AP35813 382 aa8.77□□□□□ -1.01
SIX4-202ENST00000554079 SMIM11AP58511 58 aa8.77□□□□□ -1.01
SIX4-202ENST00000554079 PPP2CBP62714 309 aa8.77□□□□□ -1.01
SIX4-202ENST00000554079 PPP2CAP67775 309 aa8.77□□□□□ -1.01
SIX4-202ENST00000554079 RAE1P78406 368 aaKnown RBP8.77□□□□□ -1.01
SIX4-202ENST00000554079 BEX3Q00994 111 aa8.77□□□□□ -1.01
SIX4-202ENST00000554079 TRA2AQ13595 282 aaKnown RBP eCLIP8.77□□□□□ -1.01
SIX4-202ENST00000554079 SLC10A1Q14973 349 aa8.77□□□□□ -1.01
SIX4-202ENST00000554079 RPS26P11Q5JNZ5 115 aaPredicted RBP8.77□□□□□ -1.01
SIX4-202ENST00000554079 HIST2H3PS2Q5TEC6 136 aa8.77□□□□□ -1.01
SIX4-202ENST00000554079 NRROSQ86YC3 692 aa8.77□□□□□ -1.01
SIX4-202ENST00000554079 TMEM99Q8N816 258 aa8.77□□□□□ -1.01
SIX4-202ENST00000554079 ZNF671Q8TAW3 534 aa8.77□□□□□ -1.01
SIX4-202ENST00000554079 DERL3Q96Q80 235 aa8.77□□□□□ -1.01
SIX4-202ENST00000554079 RIOK2Q9BVS4 552 aaKnown RBP8.77□□□□□ -1.01
SIX4-202ENST00000554079 SLC32A1Q9H598 525 aa8.77□□□□□ -1.01
SIX4-202ENST00000554079 ZFYVE1Q9HBF4 777 aa8.77□□□□□ -1.01
SIX4-202ENST00000554079 CALML5Q9NZT1 146 aa8.77□□□□□ -1.01
SIX4-202ENST00000554079 GULP1Q9UBP9 304 aa8.77□□□□□ -1.01
SIX4-202ENST00000554079 TMED3Q9Y3Q3 217 aa8.77□□□□□ -1.01
SIX4-202ENST00000554079 POMT1Q9Y6A1 747 aa8.77□□□□□ -1.01
SIX4-202ENST00000554079 PLXND1Q9Y4D7 1925 aa8.77□□□□□ -1.01
SIX4-202ENST00000554079 ANAPC1Q9H1A4 1944 aa8.77□□□□□ -1.01
SIX4-202ENST00000554079 PIRO00625 290 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 SOCS6O14544 535 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 PHOX2AO14813 284 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 SURF4O15260 269 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 IRAK2O43187 625 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 TSPAN3O60637 253 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 NSA2O95478 260 aaKnown RBP8.76□□□□□ -1.01
SIX4-202ENST00000554079 ST6GAL1P15907 406 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 CD1CP29017 333 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 PTGER3P43115 390 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 DVL1P1P54792 670 aaPredicted RBP8.76□□□□□ -1.01
SIX4-202ENST00000554079 SGCGQ13326 291 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 ZNF234Q14588 700 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 GPNMBQ14956 572 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 KCNMB1Q16558 191 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 ODF4Q2M2E3 257 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 TRIM40Q6P9F5 258 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 FBXO46Q6PJ61 603 aaPredicted RBP8.76□□□□□ -1.01
SIX4-202ENST00000554079 ENPP7Q6UWV6 458 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 BTNL8Q6UX41 500 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 PEG10Q86TG7 708 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms