RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 S100A3P33764 101 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 CDH11P55287 796 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 CXCR4P61073 352 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 ZNF117Q03924 483 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 BSPH1Q075Z2 132 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 KRTAP1-1Q07627 177 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 LRRC74AQ0VAA2 488 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 ITGADQ13349 1161 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 LASP1Q14847 261 aaKnown RBP7.84□□□□□ -1.15
TDP1-208ENST00000553989 DPY19L1Q2PZI1 675 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 SPDYE7PQ495Y7 208 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 ZNF672Q499Z4 452 aaPredicted RBP7.84□□□□□ -1.15
TDP1-208ENST00000553989 ZNF385BQ569K4 471 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 C6orf141Q5SZD1 244 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 LRIF1Q5T3J3 769 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 ERICH5Q6P6B1 374 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 PODNL1Q6PEZ8 512 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 BHLHA15Q7RTS1 189 aaPredicted RBP7.84□□□□□ -1.15
TDP1-208ENST00000553989 NUFIP2Q7Z417 695 aaKnown RBP7.84□□□□□ -1.15
TDP1-208ENST00000553989 EPHX4Q8IUS5 362 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 GABRG1Q8N1C3 465 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 SETD9Q8NE22 299 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 POC1BQ8TC44 478 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 ZFP90Q8TF47 636 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 RAB2BQ8WUD1 216 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 CDS1Q92903 461 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 FAM162AQ96A26 154 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 C12orf43Q96C57 262 aaKnown RBP7.84□□□□□ -1.15
TDP1-208ENST00000553989 GIMAP5Q96F15 307 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 C16orf58Q96GQ5 468 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 PYURFQ96I23 114 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 OR52E6Q96RD3 313 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 SPATA9Q9BWV2 254 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 SLCO5A1Q9H2Y9 848 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 NTN4Q9HB63 628 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 BARX1Q9HBU1 254 aaPredicted RBP7.84□□□□□ -1.15
TDP1-208ENST00000553989 DCAF13Q9NV06 445 aaKnown RBP7.84□□□□□ -1.15
TDP1-208ENST00000553989 FAM118AQ9NWS6 357 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 KLHL9Q9P2J3 617 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.84□□□□□ -1.15
TDP1-208ENST00000553989 POU2F3Q9UKI9 436 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 BAG5Q9UL15 447 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 SNX5Q9Y5X3 404 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 FBN3Q75N90 2809 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 CHD3Q12873 2000 aaKnown RBP7.84□□□□□ -1.15
TDP1-208ENST00000553989 PCNX3Q9H6A9 2034 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 RTTNQ86VV8 2226 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 A0A1W2PQD3 144 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 M0QX08 132 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 OVOL3O00110 214 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 TLX2O43763 284 aaPredicted RBP7.83□□□□□ -1.16
TDP1-208ENST00000553989 CD5LO43866 347 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 SSX4O60224 188 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 LYZL6O75951 148 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 SEC14L2O76054 403 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 SOX30O94993 753 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 SNAP29O95721 258 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 CST1P01037 141 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 IGHV4-39P01824 125 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 YES1P07947 543 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 CCDC159P0C7I6 412 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 DANCRP0C864 163 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 SDC1P18827 310 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 PRPS1L1P21108 318 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 PPIBP23284 216 aaKnown RBP7.83□□□□□ -1.16
TDP1-208ENST00000553989 HPCAL1P37235 193 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 P2RX1P51575 399 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 NUDT6P53370 316 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 CDH15P55291 814 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 SELENBP1Q13228 472 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 PMS2P3Q13401 168 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 TP53BP2Q13625 1128 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 P2RY6Q15077 328 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 PPA1Q15181 289 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 CHRFAM7AQ494W8 412 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 CDC73Q6P1J9 531 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 ZCCHC12Q6PEW1 402 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.83□□□□□ -1.16
TDP1-208ENST00000553989 R3HCC1LQ7Z5L2 792 aaKnown RBP7.83□□□□□ -1.16
TDP1-208ENST00000553989 ATG4DQ86TL0 474 aaPredicted RBP7.83□□□□□ -1.16
TDP1-208ENST00000553989 CALHM3Q86XJ0 350 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 SLC43A2Q8N370 569 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 OR13F1Q8NGS4 319 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 LILRB1Q8NHL6 650 aaPredicted RBP7.83□□□□□ -1.16
TDP1-208ENST00000553989 HOXB13Q92826 284 aaPredicted RBP7.83□□□□□ -1.16
TDP1-208ENST00000553989 TESCQ96BS2 214 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 MUCL1Q96DR8 90 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 FAM120BQ96EK7 910 aaKnown RBP7.83□□□□□ -1.16
TDP1-208ENST00000553989 SLC47A1Q96FL8 570 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 MUS81Q96NY9 551 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 KLHDC3Q9BQ90 382 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 RHNO1Q9BSD3 238 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 BTBD2Q9BX70 525 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 ACSS1Q9NUB1 689 aaPredicted RBP7.83□□□□□ -1.16
TDP1-208ENST00000553989 CISD1Q9NZ45 108 aaKnown RBP7.83□□□□□ -1.16
TDP1-208ENST00000553989 SLAMF8Q9P0V8 285 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 GMPR2Q9P2T1 348 aaKnown RBP7.83□□□□□ -1.16
TDP1-208ENST00000553989 GDF2Q9UK05 429 aaPredicted RBP7.83□□□□□ -1.16
TDP1-208ENST00000553989 RPS6KA6Q9UK32 745 aa7.83□□□□□ -1.16
TDP1-208ENST00000553989 SAMD4AQ9UPU9 718 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms