RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 HOPXQ9BPY8 73 aaPredicted RBP8.99□□□□□ -0.97
HNRNPC-208ENST00000553753 TMEM43Q9BTV4 400 aa8.99□□□□□ -0.97
HNRNPC-208ENST00000553753 NSRP1Q9H0G5 558 aaKnown RBP8.99□□□□□ -0.97
HNRNPC-208ENST00000553753 PCDHAC1Q9H158 963 aa8.99□□□□□ -0.97
HNRNPC-208ENST00000553753 B3GAT1Q9P2W7 334 aa8.99□□□□□ -0.97
HNRNPC-208ENST00000553753 AP3M1Q9Y2T2 418 aa8.99□□□□□ -0.97
HNRNPC-208ENST00000553753 CORINQ9Y5Q5 1042 aa8.99□□□□□ -0.97
HNRNPC-208ENST00000553753 ALPK2Q86TB3 2170 aa8.98□□□□□ -0.97
HNRNPC-208ENST00000553753 MED13LQ71F56 2210 aa8.98□□□□□ -0.97
HNRNPC-208ENST00000553753 LOC102725191A0A1B0GVB3 256 aa8.98□□□□□ -0.97
HNRNPC-208ENST00000553753 TRAPPC13A5PLN9 417 aa8.98□□□□□ -0.97
HNRNPC-208ENST00000553753 OR6C65A6NJZ3 312 aa8.98□□□□□ -0.97
HNRNPC-208ENST00000553753 KRT33AO76009 404 aa8.98□□□□□ -0.97
HNRNPC-208ENST00000553753 THY1P04216 161 aa8.98□□□□□ -0.97
HNRNPC-208ENST00000553753 CD3EP07766 207 aa8.98□□□□□ -0.97
HNRNPC-208ENST00000553753 NQO1P15559 274 aaKnown RBP8.98□□□□□ -0.97
HNRNPC-208ENST00000553753 PTNP21246 168 aa8.98□□□□□ -0.97
HNRNPC-208ENST00000553753 MPGP29372 298 aa8.98□□□□□ -0.97
HNRNPC-208ENST00000553753 KDELR2P33947 212 aa8.98□□□□□ -0.97
HNRNPC-208ENST00000553753 LTBQ06643 244 aa8.98□□□□□ -0.97
HNRNPC-208ENST00000553753 BSPH1Q075Z2 132 aa8.98□□□□□ -0.97
HNRNPC-208ENST00000553753 C9orf135Q5VTT2 229 aa8.98□□□□□ -0.97
HNRNPC-208ENST00000553753 NIPAL3Q6P499 406 aa8.98□□□□□ -0.97
HNRNPC-208ENST00000553753 ABHD12BQ7Z5M8 362 aaPredicted RBP8.98□□□□□ -0.97
HNRNPC-208ENST00000553753 TSPYL5Q86VY4 417 aaPredicted RBP8.98□□□□□ -0.97
HNRNPC-208ENST00000553753 SLC15A3Q8IY34 581 aa8.98□□□□□ -0.97
HNRNPC-208ENST00000553753 OR52N5Q8NH56 324 aa8.98□□□□□ -0.97
HNRNPC-208ENST00000553753 CMTM5Q96DZ9 223 aa8.98□□□□□ -0.97
HNRNPC-208ENST00000553753 SLC41A3Q96GZ6 507 aa8.98□□□□□ -0.97
HNRNPC-208ENST00000553753 MYLK2Q9H1R3 596 aa8.98□□□□□ -0.97
HNRNPC-208ENST00000553753 BEX4Q9NWD9 120 aaPredicted RBP8.98□□□□□ -0.97
HNRNPC-208ENST00000553753 CMTM6Q9NX76 183 aa8.98□□□□□ -0.97
HNRNPC-208ENST00000553753 SLC7A7Q9UM01 511 aa8.98□□□□□ -0.97
HNRNPC-208ENST00000553753 RNF115Q9Y4L5 304 aa8.98□□□□□ -0.97
HNRNPC-208ENST00000553753 ZFHX3Q15911 3703 aa8.97□□□□□ -0.97
HNRNPC-208ENST00000553753 DPRXA6NFQ7 191 aa8.97□□□□□ -0.97
HNRNPC-208ENST00000553753 CLOCKO15516 846 aa8.97□□□□□ -0.97
HNRNPC-208ENST00000553753 BGLAPP02818 100 aa8.97□□□□□ -0.97
HNRNPC-208ENST00000553753 DRD4P21917 467 aa8.97□□□□□ -0.97
HNRNPC-208ENST00000553753 NUDT2P50583 147 aa8.97□□□□□ -0.97
HNRNPC-208ENST00000553753 CLDN17P56750 224 aa8.97□□□□□ -0.97
HNRNPC-208ENST00000553753 IL1RL1Q01638 556 aa8.97□□□□□ -0.97
HNRNPC-208ENST00000553753 C1DQ13901 141 aaKnown RBP8.97□□□□□ -0.97
HNRNPC-208ENST00000553753 LRRC23Q53EV4 343 aaPredicted RBP8.97□□□□□ -0.97
HNRNPC-208ENST00000553753 C8orf82Q6P1X6 216 aaPredicted RBP8.97□□□□□ -0.97
HNRNPC-208ENST00000553753 TTC33Q6PID6 262 aaPredicted RBP8.97□□□□□ -0.97
HNRNPC-208ENST00000553753 WDR88Q6ZMY6 472 aa8.97□□□□□ -0.97
HNRNPC-208ENST00000553753 CARM1Q86X55 608 aa8.97□□□□□ -0.97
HNRNPC-208ENST00000553753 MICU2Q8IYU8 434 aa8.97□□□□□ -0.97
HNRNPC-208ENST00000553753 C17orf78Q8N4C9 275 aa8.97□□□□□ -0.97
HNRNPC-208ENST00000553753 C10orf53Q8N6V4 93 aa8.97□□□□□ -0.97
HNRNPC-208ENST00000553753 SCAIQ8N9R8 606 aa8.97□□□□□ -0.97
HNRNPC-208ENST00000553753 ADPRHL1Q8NDY3 354 aa8.97□□□□□ -0.97
HNRNPC-208ENST00000553753 C1orf162Q8NEQ5 155 aaPredicted RBP8.97□□□□□ -0.97
HNRNPC-208ENST00000553753 AKAP1Q92667 903 aaKnown RBP eCLIP8.97□□□□□ -0.97
HNRNPC-208ENST00000553753 MPP4Q96JB8 637 aa8.97□□□□□ -0.97
HNRNPC-208ENST00000553753 MOGAT1Q96PD6 335 aa8.97□□□□□ -0.97
HNRNPC-208ENST00000553753 CCL19Q99731 98 aa8.97□□□□□ -0.97
HNRNPC-208ENST00000553753 PIP5K1AQ99755 562 aa8.97□□□□□ -0.97
HNRNPC-208ENST00000553753 ASPNQ9BXN1 380 aa8.97□□□□□ -0.97
HNRNPC-208ENST00000553753 AMBRA1Q9C0C7 1298 aa8.97□□□□□ -0.97
HNRNPC-208ENST00000553753 NPAP1Q9NZP6 1156 aa8.97□□□□□ -0.97
HNRNPC-208ENST00000553753 RCE1Q9Y256 329 aa8.97□□□□□ -0.97
HNRNPC-208ENST00000553753 SLC25A15Q9Y619 301 aa8.97□□□□□ -0.97
HNRNPC-208ENST00000553753 A0A1W2PR80 420 aa8.96□□□□□ -0.97
HNRNPC-208ENST00000553753 ZNF587BE7ETH6 402 aa8.96□□□□□ -0.97
HNRNPC-208ENST00000553753 LRRN3E7EW58 273 aa8.96□□□□□ -0.97
HNRNPC-208ENST00000553753 MS4A18H0YCH9 400 aa8.96□□□□□ -0.97
HNRNPC-208ENST00000553753 HS3ST1O14792 307 aa8.96□□□□□ -0.97
HNRNPC-208ENST00000553753 ZNF432O94892 652 aa8.96□□□□□ -0.97
HNRNPC-208ENST00000553753 LYPD3O95274 346 aa8.96□□□□□ -0.97
HNRNPC-208ENST00000553753 MT-ATP6P00846 226 aa8.96□□□□□ -0.97
HNRNPC-208ENST00000553753 CDH2P19022 906 aaPredicted RBP8.96□□□□□ -0.97
HNRNPC-208ENST00000553753 TNFRSF1BP20333 461 aa8.96□□□□□ -0.97
HNRNPC-208ENST00000553753 OR1E2P47887 323 aa8.96□□□□□ -0.97
HNRNPC-208ENST00000553753 SLC7A2P52569 658 aa8.96□□□□□ -0.97
HNRNPC-208ENST00000553753 GNGT1P63211 74 aa8.96□□□□□ -0.97
HNRNPC-208ENST00000553753 SELENOWP63302 87 aa8.96□□□□□ -0.97
HNRNPC-208ENST00000553753 LIPEQ05469 1076 aa8.96□□□□□ -0.97
HNRNPC-208ENST00000553753 LGALS3BPQ08380 585 aa8.96□□□□□ -0.97
HNRNPC-208ENST00000553753 PMS2P3Q13401 168 aa8.96□□□□□ -0.97
HNRNPC-208ENST00000553753 MS4A18Q3C1V0 323 aa8.96□□□□□ -0.97
HNRNPC-208ENST00000553753 CYBRD1Q53TN4 286 aa8.96□□□□□ -0.97
HNRNPC-208ENST00000553753 ADAM5Q6NVV9 412 aa8.96□□□□□ -0.97
HNRNPC-208ENST00000553753 HACD2Q6Y1H2 254 aa8.96□□□□□ -0.97
HNRNPC-208ENST00000553753 ZNF611Q8N823 705 aa8.96□□□□□ -0.97
HNRNPC-208ENST00000553753 LILRB1Q8NHL6 650 aaPredicted RBP8.96□□□□□ -0.97
HNRNPC-208ENST00000553753 TPD52L3Q96J77 140 aa8.96□□□□□ -0.97
HNRNPC-208ENST00000553753 ALKBH3Q96Q83 286 aaPredicted RBP8.96□□□□□ -0.97
HNRNPC-208ENST00000553753 ZNF426Q9BUY5 554 aa8.96□□□□□ -0.97
HNRNPC-208ENST00000553753 SLC19A3Q9BZV2 496 aa8.96□□□□□ -0.97
HNRNPC-208ENST00000553753 ALG2Q9H553 416 aa8.96□□□□□ -0.97
HNRNPC-208ENST00000553753 MRPL39Q9NYK5 338 aaKnown RBP8.96□□□□□ -0.97
HNRNPC-208ENST00000553753 RAI1Q7Z5J4 1906 aaPredicted RBP8.96□□□□□ -0.97
HNRNPC-208ENST00000553753 MTORP42345 2549 aa8.96□□□□□ -0.97
HNRNPC-208ENST00000553753 ACANP16112 2415 aa8.96□□□□□ -0.97
HNRNPC-208ENST00000553753 NME4O00746 187 aa8.96□□□□□ -0.98
HNRNPC-208ENST00000553753 NDUFAB1O14561 156 aa8.96□□□□□ -0.98
HNRNPC-208ENST00000553753 SHOX2O60902 331 aaPredicted RBP8.96□□□□□ -0.98
HNRNPC-208ENST00000553753 UPK3AO75631 287 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms