RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 AP1ARQ63HQ0 302 aa11.74□□□□□ -0.53
PRPF39-204ENST00000553605 ZNF771Q7L3S4 317 aaPredicted RBP11.74□□□□□ -0.53
PRPF39-204ENST00000553605 EPHX4Q8IUS5 362 aa11.74□□□□□ -0.53
PRPF39-204ENST00000553605 ARFGAP2Q8N6H7 521 aa11.74□□□□□ -0.53
PRPF39-204ENST00000553605 PSMA8Q8TAA3 256 aa11.74□□□□□ -0.53
PRPF39-204ENST00000553605 ST7LQ8TDW4 575 aa11.74□□□□□ -0.53
PRPF39-204ENST00000553605 OR5P2Q8WZ92 322 aa11.74□□□□□ -0.53
PRPF39-204ENST00000553605 FCRL1Q96LA6 429 aa11.74□□□□□ -0.53
PRPF39-204ENST00000553605 GAL3ST1Q99999 423 aa11.74□□□□□ -0.53
PRPF39-204ENST00000553605 ACSS3Q9H6R3 686 aa11.74□□□□□ -0.53
PRPF39-204ENST00000553605 MMP26Q9NRE1 261 aa11.74□□□□□ -0.53
PRPF39-204ENST00000553605 LEF1Q9UJU2 399 aaPredicted RBP11.74□□□□□ -0.53
PRPF39-204ENST00000553605 FAM181BA6NEQ2 426 aa11.73□□□□□ -0.53
PRPF39-204ENST00000553605 DUXAA6NLW8 204 aa11.73□□□□□ -0.53
PRPF39-204ENST00000553605 RAD51CO43502 376 aa11.73□□□□□ -0.53
PRPF39-204ENST00000553605 TRAF3IP2O43734 574 aaPredicted RBP11.73□□□□□ -0.53
PRPF39-204ENST00000553605 SCN2BO60939 215 aa11.73□□□□□ -0.53
PRPF39-204ENST00000553605 FOXH1O75593 365 aa11.73□□□□□ -0.53
PRPF39-204ENST00000553605 VAMP5O95183 116 aa11.73□□□□□ -0.53
PRPF39-204ENST00000553605 TSPAN15O95858 294 aa11.73□□□□□ -0.53
PRPF39-204ENST00000553605 NGFP01138 241 aa11.73□□□□□ -0.53
PRPF39-204ENST00000553605 CRYBA1P05813 215 aa11.73□□□□□ -0.53
PRPF39-204ENST00000553605 SERPINB9P50453 376 aa11.73□□□□□ -0.53
PRPF39-204ENST00000553605 P2RY4P51582 365 aa11.73□□□□□ -0.53
PRPF39-204ENST00000553605 RPS26P62854 115 aaKnown RBP11.73□□□□□ -0.53
PRPF39-204ENST00000553605 GALK2Q01415 458 aa11.73□□□□□ -0.53
PRPF39-204ENST00000553605 ZNF154Q13106 437 aa11.73□□□□□ -0.53
PRPF39-204ENST00000553605 PCGF3Q3KNV8 242 aa11.73□□□□□ -0.53
PRPF39-204ENST00000553605 TMEM154Q6P9G4 183 aa11.73□□□□□ -0.53
PRPF39-204ENST00000553605 ZDHHC24Q6UX98 284 aa11.73□□□□□ -0.53
PRPF39-204ENST00000553605 SYT10Q6XYQ8 523 aa11.73□□□□□ -0.53
PRPF39-204ENST00000553605 CCNYL1Q8N7R7 359 aa11.73□□□□□ -0.53
PRPF39-204ENST00000553605 KIF18AQ8NI77 898 aa11.73□□□□□ -0.53
PRPF39-204ENST00000553605 FAM110DQ8TAY7 271 aaPredicted RBP11.73□□□□□ -0.53
PRPF39-204ENST00000553605 MOAP1Q96BY2 351 aa11.73□□□□□ -0.53
PRPF39-204ENST00000553605 ZNF350Q9GZX5 532 aa11.73□□□□□ -0.53
PRPF39-204ENST00000553605 HINT3Q9NQE9 182 aaKnown RBP11.73□□□□□ -0.53
PRPF39-204ENST00000553605 EXOSC3Q9NQT5 275 aaKnown RBP11.73□□□□□ -0.53
PRPF39-204ENST00000553605 B3GNT2Q9NY97 397 aa11.73□□□□□ -0.53
PRPF39-204ENST00000553605 TAAR3PQ9P1P4 343 aa11.73□□□□□ -0.53
PRPF39-204ENST00000553605 PURGQ9UJV8 347 aaKnown RBP11.73□□□□□ -0.53
PRPF39-204ENST00000553605 DSPPQ9NZW4 1301 aa11.72□□□□□ -0.53
PRPF39-204ENST00000553605 CLPSL1A2RUU4 121 aa11.72□□□□□ -0.53
PRPF39-204ENST00000553605 SLC28A1O00337 649 aa11.72□□□□□ -0.53
PRPF39-204ENST00000553605 AP3D1O14617 1153 aa11.72□□□□□ -0.53
PRPF39-204ENST00000553605 C6orf47O95873 294 aa11.72□□□□□ -0.53
PRPF39-204ENST00000553605 HLA-HP01893 362 aa11.72□□□□□ -0.53
PRPF39-204ENST00000553605 PRB2P02812 416 aaPredicted RBP11.72□□□□□ -0.53
PRPF39-204ENST00000553605 GSTA1P08263 222 aa11.72□□□□□ -0.53
PRPF39-204ENST00000553605 LAMP1P11279 417 aa11.72□□□□□ -0.53
PRPF39-204ENST00000553605 CD79AP11912 226 aa11.72□□□□□ -0.53
PRPF39-204ENST00000553605 SELEP16581 610 aa11.72□□□□□ -0.53
PRPF39-204ENST00000553605 ZNF14P17017 642 aaPredicted RBP11.72□□□□□ -0.53
PRPF39-204ENST00000553605 MATN1P21941 496 aa11.72□□□□□ -0.53
PRPF39-204ENST00000553605 ETF1P62495 437 aaKnown RBP11.72□□□□□ -0.53
PRPF39-204ENST00000553605 KCNJ10P78508 379 aa11.72□□□□□ -0.53
PRPF39-204ENST00000553605 HLXQ14774 488 aaPredicted RBP11.72□□□□□ -0.53
PRPF39-204ENST00000553605 GSG1Q2KHT4 349 aa11.72□□□□□ -0.53
PRPF39-204ENST00000553605 CEACAM16Q2WEN9 425 aa11.72□□□□□ -0.53
PRPF39-204ENST00000553605 HFEQ30201 348 aa11.72□□□□□ -0.53
PRPF39-204ENST00000553605 BEAN1Q3B7T3 259 aa11.72□□□□□ -0.53
PRPF39-204ENST00000553605 LSM12Q3MHD2 195 aaKnown RBP11.72□□□□□ -0.53
PRPF39-204ENST00000553605 RFTN2Q52LD8 501 aaPredicted RBP11.72□□□□□ -0.53
PRPF39-204ENST00000553605 PRAMEF8Q5VWM4 474 aa11.72□□□□□ -0.53
PRPF39-204ENST00000553605 PRAMEF7Q5VXH5 474 aa11.72□□□□□ -0.53
PRPF39-204ENST00000553605 USP51Q70EK9 711 aa11.72□□□□□ -0.53
PRPF39-204ENST00000553605 JAZF1Q86VZ6 243 aa11.72□□□□□ -0.53
PRPF39-204ENST00000553605 OR7A2PQ8NGA2 310 aa11.72□□□□□ -0.53
PRPF39-204ENST00000553605 OR5AK3PQ8NH89 298 aa11.72□□□□□ -0.53
PRPF39-204ENST00000553605 SFXN5Q8TD22 340 aa11.72□□□□□ -0.53
PRPF39-204ENST00000553605 MGARPQ8TDB4 240 aa11.72□□□□□ -0.53
PRPF39-204ENST00000553605 OIT3Q8WWZ8 545 aa11.72□□□□□ -0.53
PRPF39-204ENST00000553605 ZNF837Q96EG3 531 aaPredicted RBP11.72□□□□□ -0.53
PRPF39-204ENST00000553605 GPR35Q9HC97 309 aa11.72□□□□□ -0.53
PRPF39-204ENST00000553605 ADPRHL2Q9NX46 363 aa11.72□□□□□ -0.53
PRPF39-204ENST00000553605 NKIRAS2Q9NYR9 191 aa11.72□□□□□ -0.53
PRPF39-204ENST00000553605 UBAP1Q9NZ09 502 aa11.72□□□□□ -0.53
PRPF39-204ENST00000553605 ATP6V1HQ9UI12 483 aa11.72□□□□□ -0.53
PRPF39-204ENST00000553605 GPR160Q9UJ42 338 aa11.72□□□□□ -0.53
PRPF39-204ENST00000553605 SOX21Q9Y651 276 aaPredicted RBP11.72□□□□□ -0.53
PRPF39-204ENST00000553605 CACNG2Q9Y698 323 aa11.72□□□□□ -0.53
PRPF39-204ENST00000553605 SAR1BQ9Y6B6 198 aa11.72□□□□□ -0.53
PRPF39-204ENST00000553605 CLDN24A6NM45 220 aa11.71□□□□□ -0.53
PRPF39-204ENST00000553605 C3orf80F5H4A9 247 aa11.71□□□□□ -0.53
PRPF39-204ENST00000553605 G3V4G9 280 aa11.71□□□□□ -0.53
PRPF39-204ENST00000553605 H3BQF6 201 aa11.71□□□□□ -0.53
PRPF39-204ENST00000553605 HOXA3O43365 443 aaPredicted RBP11.71□□□□□ -0.53
PRPF39-204ENST00000553605 TPD52L2O43399 206 aaKnown RBP11.71□□□□□ -0.53
PRPF39-204ENST00000553605 SEC14L2O76054 403 aa11.71□□□□□ -0.53
PRPF39-204ENST00000553605 CHRM4P08173 479 aa11.71□□□□□ -0.53
PRPF39-204ENST00000553605 UROSP10746 265 aa11.71□□□□□ -0.53
PRPF39-204ENST00000553605 SELENOVP59797 346 aa11.71□□□□□ -0.53
PRPF39-204ENST00000553605 RPL38P63173 70 aaKnown RBP11.71□□□□□ -0.53
PRPF39-204ENST00000553605 PIGFQ07326 219 aa11.71□□□□□ -0.53
PRPF39-204ENST00000553605 FAM153CQ494X1 144 aa11.71□□□□□ -0.53
PRPF39-204ENST00000553605 VAX1Q5SQQ9 334 aa11.71□□□□□ -0.53
PRPF39-204ENST00000553605 TYW3Q6IPR3 259 aaKnown RBP11.71□□□□□ -0.53
PRPF39-204ENST00000553605 C16orf62Q7Z3J2 963 aa11.71□□□□□ -0.53
PRPF39-204ENST00000553605 REC114Q7Z4M0 266 aa11.71□□□□□ -0.53
PRPF39-204ENST00000553605 CMIPQ8IY22 773 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms