RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 MAGEB4O15481 346 aaPredicted RBP12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 HPGDSO60760 199 aa12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 WISP1O95388 367 aa12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 APOA1P02647 267 aa12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 IL7P13232 177 aa12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 AZGP1P25311 298 aaKnown RBP12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 HSF2Q03933 536 aa12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 QPRTQ15274 297 aa12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 PXKQ7Z7A4 578 aa12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 PPP1R3BQ86XI6 285 aa12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 MS4A15Q8N5U1 240 aa12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 GDPD1Q8N9F7 314 aa12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 OR2I1PQ8NGU4 316 aa12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 IFI44Q8TCB0 444 aa12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 DUSP19Q8WTR2 217 aa12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 SNX33Q8WV41 574 aa12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 GHSRQ92847 366 aa12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 KIAA1143Q96AT1 154 aaPredicted RBP12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 MRPL48Q96GC5 212 aaKnown RBP12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 MARCH7Q9H992 704 aa12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 APMAPQ9HDC9 416 aa12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 GRHPRQ9UBQ7 328 aa12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 EXPH5Q8NEV8 1989 aa12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 TMED7-TICAM2A0A0A6YYA0 188 aa12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 FAM171A2A8MVW0 826 aa12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 SLC25A12O75746 678 aa12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 SLC26A5P58743 744 aa12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 SIRPAP78324 504 aa12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 CDK5R1Q15078 307 aa12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 ACSM3Q53FZ2 586 aa12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 C1QL3Q5VWW1 255 aa12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 GPR139Q6DWJ6 353 aa12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 PAPD4Q6PIY7 484 aaKnown RBP12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 CCBE1Q6UXH8 406 aaPredicted RBP12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 NR2C2APQ86WQ0 139 aa12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 MISPQ8IVT2 679 aa12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 TEX19Q8NA77 164 aa12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 NUBPLQ8TB37 319 aa12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 ACOT12Q8WYK0 555 aa12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 TSPAN32Q96QS1 320 aa12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 WDR77Q9BQA1 342 aaPredicted RBP12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 SOSTQ9BQB4 213 aa12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 OCIAD1Q9NX40 245 aa12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 TAS2R10Q9NYW0 307 aa12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 TMED7Q9Y3B3 224 aa12.72□□□□□ -0.37
RAB3IP-216ENST00000552199 TMEM72A0PK05 275 aa12.71□□□□□ -0.37
RAB3IP-216ENST00000552199 SUSD5O60279 629 aa12.71□□□□□ -0.37
RAB3IP-216ENST00000552199 ZNF354AO60765 605 aaPredicted RBP12.71□□□□□ -0.37
RAB3IP-216ENST00000552199 TMCC2O75069 709 aa12.71□□□□□ -0.37
RAB3IP-216ENST00000552199 CPNE3O75131 537 aaKnown RBP12.71□□□□□ -0.37
RAB3IP-216ENST00000552199 MT-ATP6P00846 226 aa12.71□□□□□ -0.37
RAB3IP-216ENST00000552199 CD1AP06126 327 aa12.71□□□□□ -0.37
RAB3IP-216ENST00000552199 EVX1P49640 407 aa12.71□□□□□ -0.37
RAB3IP-216ENST00000552199 GDI2P50395 445 aaKnown RBP12.71□□□□□ -0.37
RAB3IP-216ENST00000552199 MESTQ5EB52 335 aa12.71□□□□□ -0.37
RAB3IP-216ENST00000552199 PHF19Q5T6S3 580 aa12.71□□□□□ -0.37
RAB3IP-216ENST00000552199 FAM27D1Q5T7N8 215 aa12.71□□□□□ -0.37
RAB3IP-216ENST00000552199 LCN10Q6JVE6 187 aa12.71□□□□□ -0.37
RAB3IP-216ENST00000552199 RPL22L1Q6P5R6 122 aaKnown RBP12.71□□□□□ -0.37
RAB3IP-216ENST00000552199 METAP1DQ6UB28 335 aaPredicted RBP12.71□□□□□ -0.37
RAB3IP-216ENST00000552199 LYPD4Q6UWN0 246 aa12.71□□□□□ -0.37
RAB3IP-216ENST00000552199 MAMDC2Q7Z304 686 aaPredicted RBP12.71□□□□□ -0.37
RAB3IP-216ENST00000552199 GRINAQ7Z429 371 aa12.71□□□□□ -0.37
RAB3IP-216ENST00000552199 CPEB2Q7Z5Q1 589 aaKnown RBP12.71□□□□□ -0.37
RAB3IP-216ENST00000552199 TPRA1Q86W33 373 aa12.71□□□□□ -0.37
RAB3IP-216ENST00000552199 ADGRG3Q86Y34 549 aa12.71□□□□□ -0.37
RAB3IP-216ENST00000552199 THAP4Q8WY91 577 aa12.71□□□□□ -0.37
RAB3IP-216ENST00000552199 SMIM19Q96E16 107 aa12.71□□□□□ -0.37
RAB3IP-216ENST00000552199 TSSK2Q96PF2 358 aa12.71□□□□□ -0.37
RAB3IP-216ENST00000552199 PTDSS2Q9BVG9 487 aa12.71□□□□□ -0.37
RAB3IP-216ENST00000552199 CCDC86Q9H6F5 360 aaKnown RBP12.71□□□□□ -0.37
RAB3IP-216ENST00000552199 RXFP3Q9NSD7 469 aa12.71□□□□□ -0.37
RAB3IP-216ENST00000552199 TAS2R5Q9NYW4 299 aa12.71□□□□□ -0.37
RAB3IP-216ENST00000552199 GNG8Q9UK08 70 aa12.71□□□□□ -0.37
RAB3IP-216ENST00000552199 ZNF346Q9UL40 294 aaKnown RBP12.71□□□□□ -0.37
RAB3IP-216ENST00000552199 PCDHGB2Q9Y5G2 931 aa12.71□□□□□ -0.37
RAB3IP-216ENST00000552199 A0A1W2PRG6 482 aa12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 PATE3B3GLJ2 98 aa12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 NPIPB7O75200 414 aa12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 SERPINA3P01011 423 aa12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 MYL9P24844 172 aa12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 CD97P48960 835 aa12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 FBXW4P57775 412 aa12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 DAB2P98082 770 aa12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 COL28A1Q2UY09 1125 aa12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 PYDC2Q56P42 97 aa12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 HBMQ6B0K9 141 aa12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 CNIH2Q6PI25 160 aa12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 SLC16A9Q7RTY1 509 aa12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 C1orf210Q8IVY1 113 aa12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 ZNF511Q8NB15 262 aa12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 THAP3Q8WTV1 239 aaPredicted RBP12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 ZC3H10Q96K80 434 aaKnown RBP12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 GFM1Q96RP9 751 aaKnown RBP12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 SPSB2Q99619 263 aa12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 SLC26A1Q9H2B4 701 aa12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 PPP1R3EQ9H7J1 279 aa12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 SRA1Q9HD15 236 aaKnown RBP12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 TRBV11-1A0A0K0K1C0 115 aa12.7□□□□□ -0.38
RAB3IP-216ENST00000552199 A0A1W2PQ09 198 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms