RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 ZNF416Q9BWM5 594 aa4.59□□□□□ -1.67
HOXB3-213ENST00000552000 C1QTNF3Q9BXJ4 246 aa4.59□□□□□ -1.67
HOXB3-213ENST00000552000 MRPL37Q9BZE1 423 aaKnown RBP4.59□□□□□ -1.67
HOXB3-213ENST00000552000 LAT2Q9GZY6 243 aa4.59□□□□□ -1.67
HOXB3-213ENST00000552000 HOXD1Q9GZZ0 328 aa4.59□□□□□ -1.67
HOXB3-213ENST00000552000 IQCGQ9H095 443 aaKnown RBP4.59□□□□□ -1.67
HOXB3-213ENST00000552000 MMP27Q9H306 513 aa4.59□□□□□ -1.67
HOXB3-213ENST00000552000 ZMAT3Q9HA38 289 aaKnown RBP4.59□□□□□ -1.67
HOXB3-213ENST00000552000 NOX3Q9HBY0 568 aa4.59□□□□□ -1.67
HOXB3-213ENST00000552000 CTPS2Q9NRF8 586 aa4.59□□□□□ -1.67
HOXB3-213ENST00000552000 DUSP22Q9NRW4 184 aa4.59□□□□□ -1.67
HOXB3-213ENST00000552000 TENM2Q9NT68 2774 aa4.59□□□□□ -1.67
HOXB3-213ENST00000552000 ZCCHC3Q9NUD5 404 aaKnown RBP4.59□□□□□ -1.67
HOXB3-213ENST00000552000 OXSMQ9NWU1 459 aa4.59□□□□□ -1.67
HOXB3-213ENST00000552000 SIRT5Q9NXA8 310 aa4.59□□□□□ -1.67
HOXB3-213ENST00000552000 SH3BP4Q9P0V3 963 aa4.59□□□□□ -1.67
HOXB3-213ENST00000552000 CRNNQ9UBG3 495 aaPredicted RBP4.59□□□□□ -1.67
HOXB3-213ENST00000552000 ZNF69Q9UC07 566 aa4.59□□□□□ -1.67
HOXB3-213ENST00000552000 CHRNA9Q9UGM1 479 aa4.59□□□□□ -1.67
HOXB3-213ENST00000552000 OPN4Q9UHM6 478 aa4.59□□□□□ -1.67
HOXB3-213ENST00000552000 SNX12Q9UMY4 172 aa4.59□□□□□ -1.67
HOXB3-213ENST00000552000 HDGFL3Q9Y3E1 203 aa4.59□□□□□ -1.67
HOXB3-213ENST00000552000 CMAHPQ9Y471 501 aa4.59□□□□□ -1.67
HOXB3-213ENST00000552000 SPIN1Q9Y657 262 aaPredicted RBP4.59□□□□□ -1.67
HOXB3-213ENST00000552000 KCNE3Q9Y6H6 103 aa4.59□□□□□ -1.67
HOXB3-213ENST00000552000 SACSQ9NZJ4 4579 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 ARPC4-TTLL3A0A0A6YYG9 625 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 PRAMEF27A3QJZ7 478 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 ZNF587BE7ETH6 402 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 ANKRD28O15084 1053 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 DNPH1O43598 174 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 CDC14BO60729 498 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 EIF1BO60739 113 aaKnown RBP4.58□□□□□ -1.68
HOXB3-213ENST00000552000 DNAJA2O60884 412 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 RP2O75695 350 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 CSTAP01040 98 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 KNG1P01042 644 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 IGKV3-15P01624 115 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 GSNP06396 782 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 SBK3P0C264 359 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 UBTFL6P0CB48 400 aaPredicted RBP4.58□□□□□ -1.68
HOXB3-213ENST00000552000 RYKP34925 604 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 RBMXP38159 391 aaKnown RBP4.58□□□□□ -1.68
HOXB3-213ENST00000552000 APOBEC1P41238 236 aaKnown RBP4.58□□□□□ -1.68
HOXB3-213ENST00000552000 MAGEA4P43358 317 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 FOXA1P55317 472 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 H3F3AP84243 136 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 GUCY2DQ02846 1103 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 POU3F1Q03052 451 aaPredicted RBP4.58□□□□□ -1.68
HOXB3-213ENST00000552000 PLP2Q04941 152 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 TP53BP2Q13625 1128 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 SLC17A1Q14916 467 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 SLC9A3R2Q15599 337 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 GPR68Q15743 365 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 ZNF678Q5SXM1 525 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 OTUD3Q5T2D3 398 aaPredicted RBP4.58□□□□□ -1.68
HOXB3-213ENST00000552000 REP15Q6BDI9 236 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 NOXRED1Q6NXP6 359 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 C17orf107Q6ZR85 190 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 RHOUQ7L0Q8 258 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 ZNF771Q7L3S4 317 aaPredicted RBP4.58□□□□□ -1.68
HOXB3-213ENST00000552000 LINGO2Q7L985 606 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 OLIG3Q7RTU3 272 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 LRP11Q86VZ4 500 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 ADGRG3Q86Y34 549 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 KIR3DL3Q8N743 410 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 ZIC4Q8N9L1 334 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 SYT14Q8NB59 555 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 OR9K2Q8NGE7 335 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 CLHC1Q8NHS4 586 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 ZNF563Q8TA94 476 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 FAM76AQ8TAV0 307 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 ADAMTS15Q8TE58 950 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 RAB8BQ92930 207 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 SLC25A28Q96A46 364 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 TMEM45BQ96B21 275 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 TMIGD2Q96BF3 282 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 PPCDCQ96CD2 204 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 RAB39BQ96DA2 213 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 BOD1Q96IK1 185 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 ZNF48Q96MX3 618 aaPredicted RBP4.58□□□□□ -1.68
HOXB3-213ENST00000552000 TMEM237Q96Q45 408 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 NAA11Q9BSU3 229 aaPredicted RBP4.58□□□□□ -1.68
HOXB3-213ENST00000552000 CCDC106Q9BWC9 280 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 ACTRT3Q9BYD9 372 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 MRPL46Q9H2W6 279 aaKnown RBP4.58□□□□□ -1.68
HOXB3-213ENST00000552000 NELFAQ9H3P2 528 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 MS4A5Q9H3V2 200 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 PIGUQ9H490 435 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 CRLF2Q9HC73 371 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 GCM1Q9NP62 436 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 SIRT3Q9NTG7 399 aaPredicted RBP4.58□□□□□ -1.68
HOXB3-213ENST00000552000 TMEM181Q9P2C4 612 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 MYEF2Q9P2K5 600 aaKnown RBP4.58□□□□□ -1.68
HOXB3-213ENST00000552000 FZR1Q9UM11 496 aa4.58□□□□□ -1.68
HOXB3-213ENST00000552000 TET2Q6N021 2002 aaPredicted RBP4.57□□□□□ -1.68
HOXB3-213ENST00000552000 TMEM72A0PK05 275 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 ZC3H12DA2A288 527 aaKnown RBP4.57□□□□□ -1.68
HOXB3-213ENST00000552000 CCDC151A5D8V7 595 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 NPIPB8E9PQR5 432 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms