RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 SNX4O95219 450 aa18.98■□□□□ 0.63
PRDM4-205ENST00000550376 BGLAPP02818 100 aa18.98■□□□□ 0.63
PRDM4-205ENST00000550376 MT-ND5P03915 603 aa18.98■□□□□ 0.63
PRDM4-205ENST00000550376 AZGP1P25311 298 aaKnown RBP18.98■□□□□ 0.63
PRDM4-205ENST00000550376 MESTQ5EB52 335 aa18.98■□□□□ 0.63
PRDM4-205ENST00000550376 STEAP3Q658P3 488 aa18.98■□□□□ 0.63
PRDM4-205ENST00000550376 TMEM205Q6UW68 189 aa18.98■□□□□ 0.63
PRDM4-205ENST00000550376 VASH1Q7L8A9 365 aaPredicted RBP18.98■□□□□ 0.63
PRDM4-205ENST00000550376 SLC35F2Q8IXU6 374 aa18.98■□□□□ 0.63
PRDM4-205ENST00000550376 OR5M1Q8NGP8 315 aa18.98■□□□□ 0.63
PRDM4-205ENST00000550376 ASB15Q8WXK1 588 aa18.98■□□□□ 0.63
PRDM4-205ENST00000550376 COX4I2Q96KJ9 171 aa18.98■□□□□ 0.63
PRDM4-205ENST00000550376 KLRF1Q9NZS2 232 aa18.98■□□□□ 0.63
PRDM4-205ENST00000550376 FBXO4Q9UKT5 387 aa18.98■□□□□ 0.63
PRDM4-205ENST00000550376 GSTK1Q9Y2Q3 226 aa18.98■□□□□ 0.63
PRDM4-205ENST00000550376 B3GALT1Q9Y5Z6 326 aa18.98■□□□□ 0.63
PRDM4-205ENST00000550376 A0A087WV48 116 aa18.97■□□□□ 0.63
PRDM4-205ENST00000550376 LNP1A1A4G5 178 aa18.97■□□□□ 0.63
PRDM4-205ENST00000550376 PRR32B1ATL7 298 aa18.97■□□□□ 0.63
PRDM4-205ENST00000550376 HLA-DPB1P04440 258 aa18.97■□□□□ 0.63
PRDM4-205ENST00000550376 UMODP07911 640 aa18.97■□□□□ 0.63
PRDM4-205ENST00000550376 HOXD12P35452 270 aa18.97■□□□□ 0.63
PRDM4-205ENST00000550376 DIO1P49895 249 aa18.97■□□□□ 0.63
PRDM4-205ENST00000550376 RUNX1T1Q06455 604 aa18.97■□□□□ 0.63
PRDM4-205ENST00000550376 ANGPT1Q15389 498 aa18.97■□□□□ 0.63
PRDM4-205ENST00000550376 SPANXN2Q5MJ10 180 aa18.97■□□□□ 0.63
PRDM4-205ENST00000550376 SLC22A16Q86VW1 577 aa18.97■□□□□ 0.63
PRDM4-205ENST00000550376 ARL5BQ96KC2 179 aa18.97■□□□□ 0.63
PRDM4-205ENST00000550376 ALG12Q9BV10 488 aa18.97■□□□□ 0.63
PRDM4-205ENST00000550376 TRIM36Q9NQ86 728 aa18.97■□□□□ 0.63
PRDM4-205ENST00000550376 SLC39A1Q9NY26 324 aa18.97■□□□□ 0.63
PRDM4-205ENST00000550376 HAO2Q9NYQ3 351 aa18.97■□□□□ 0.63
PRDM4-205ENST00000550376 A0A1W2PRG6 482 aa18.97■□□□□ 0.63
PRDM4-205ENST00000550376 ARHGEF9O43307 516 aa18.97■□□□□ 0.63
PRDM4-205ENST00000550376 IL1AP01583 271 aa18.97■□□□□ 0.63
PRDM4-205ENST00000550376 KLK3P07288 261 aaPredicted RBP18.97■□□□□ 0.63
PRDM4-205ENST00000550376 ACSM1Q08AH1 577 aa18.97■□□□□ 0.63
PRDM4-205ENST00000550376 SLC6A19Q695T7 634 aa18.97■□□□□ 0.63
PRDM4-205ENST00000550376 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.97■□□□□ 0.63
PRDM4-205ENST00000550376 CCDC190Q86UF4 302 aa18.97■□□□□ 0.63
PRDM4-205ENST00000550376 ZBTB44Q8NCP5 570 aa18.97■□□□□ 0.63
PRDM4-205ENST00000550376 NMNAT2Q9BZQ4 307 aa18.97■□□□□ 0.63
PRDM4-205ENST00000550376 COMMD3Q9UBI1 195 aa18.97■□□□□ 0.63
PRDM4-205ENST00000550376 GNG8Q9UK08 70 aa18.97■□□□□ 0.63
PRDM4-205ENST00000550376 UPK1BO75841 260 aa18.96■□□□□ 0.63
PRDM4-205ENST00000550376 SDHAP31040 664 aa18.96■□□□□ 0.63
PRDM4-205ENST00000550376 POLR2HP52434 150 aaKnown RBP18.96■□□□□ 0.63
PRDM4-205ENST00000550376 NR2C2APQ86WQ0 139 aa18.96■□□□□ 0.63
PRDM4-205ENST00000550376 OR6V1Q8N148 313 aa18.96■□□□□ 0.63
PRDM4-205ENST00000550376 NUBPLQ8TB37 319 aa18.96■□□□□ 0.63
PRDM4-205ENST00000550376 HGDQ93099 445 aa18.96■□□□□ 0.63
PRDM4-205ENST00000550376 SDHCQ99643 169 aaPredicted RBP18.96■□□□□ 0.63
PRDM4-205ENST00000550376 DEFB126Q9BYW3 111 aa18.96■□□□□ 0.63
PRDM4-205ENST00000550376 SYT4Q9H2B2 425 aa18.96■□□□□ 0.63
PRDM4-205ENST00000550376 ACOXLQ9NUZ1 547 aa18.96■□□□□ 0.63
PRDM4-205ENST00000550376 GPN3Q9UHW5 284 aaPredicted RBP18.96■□□□□ 0.63
PRDM4-205ENST00000550376 ING1Q9UK53 422 aaPredicted RBP18.96■□□□□ 0.63
PRDM4-205ENST00000550376 PCDHGB6Q9Y5F9 930 aa18.96■□□□□ 0.63
PRDM4-205ENST00000550376 TRAV36DV7A0A075B6V5 113 aa18.96■□□□□ 0.63
PRDM4-205ENST00000550376 KLF7O75840 302 aaPredicted RBP18.96■□□□□ 0.63
PRDM4-205ENST00000550376 ZFAND5O76080 213 aa18.96■□□□□ 0.63
PRDM4-205ENST00000550376 SHC1P29353 583 aa18.96■□□□□ 0.63
PRDM4-205ENST00000550376 LCN1P31025 176 aa18.96■□□□□ 0.63
PRDM4-205ENST00000550376 FGF9P31371 208 aaPredicted RBP18.96■□□□□ 0.63
PRDM4-205ENST00000550376 ARMC4Q5T2S8 1044 aa18.96■□□□□ 0.63
PRDM4-205ENST00000550376 LINC01590Q5TEZ4 76 aa18.96■□□□□ 0.63
PRDM4-205ENST00000550376 LYSMD2Q8IV50 215 aa18.96■□□□□ 0.63
PRDM4-205ENST00000550376 SNX33Q8WV41 574 aa18.96■□□□□ 0.63
PRDM4-205ENST00000550376 LIPHQ8WWY8 451 aa18.96■□□□□ 0.63
PRDM4-205ENST00000550376 GPX7Q96SL4 187 aaPredicted RBP18.96■□□□□ 0.63
PRDM4-205ENST00000550376 SLC30A2Q9BRI3 323 aa18.96■□□□□ 0.63
PRDM4-205ENST00000550376 MIXL1Q9H2W2 232 aa18.96■□□□□ 0.63
PRDM4-205ENST00000550376 EP300Q09472 2414 aaPredicted RBP18.95■□□□□ 0.62
PRDM4-205ENST00000550376 A0A075B6Q4 140 aa18.95■□□□□ 0.62
PRDM4-205ENST00000550376 LOC110117498-PIK3R3F6TDL0 507 aa18.95■□□□□ 0.62
PRDM4-205ENST00000550376 HLA-DOBP13765 273 aa18.95■□□□□ 0.62
PRDM4-205ENST00000550376 RPS18P62269 152 aaKnown RBP18.95■□□□□ 0.62
PRDM4-205ENST00000550376 C1orf140Q5VVS0 124 aa18.95■□□□□ 0.62
PRDM4-205ENST00000550376 PM20D2Q8IYS1 436 aa18.95■□□□□ 0.62
PRDM4-205ENST00000550376 C7orf57Q8NEG2 295 aa18.95■□□□□ 0.62
PRDM4-205ENST00000550376 GHSRQ92847 366 aa18.95■□□□□ 0.62
PRDM4-205ENST00000550376 PELI1Q96FA3 418 aa18.95■□□□□ 0.62
PRDM4-205ENST00000550376 SLC26A1Q9H2B4 701 aa18.95■□□□□ 0.62
PRDM4-205ENST00000550376 CRNNQ9UBG3 495 aaPredicted RBP18.95■□□□□ 0.62
PRDM4-205ENST00000550376 H3BML4 177 aa18.95■□□□□ 0.62
PRDM4-205ENST00000550376 KRR1Q13601 381 aaKnown RBP18.95■□□□□ 0.62
PRDM4-205ENST00000550376 OXA1LQ15070 435 aa18.95■□□□□ 0.62
PRDM4-205ENST00000550376 PRAMEF20Q5VT98 475 aa18.95■□□□□ 0.62
PRDM4-205ENST00000550376 FAM198BQ6UWH4 519 aa18.95■□□□□ 0.62
PRDM4-205ENST00000550376 GRINAQ7Z429 371 aa18.95■□□□□ 0.62
PRDM4-205ENST00000550376 SYT9Q86SS6 491 aa18.95■□□□□ 0.62
PRDM4-205ENST00000550376 OIT3Q8WWZ8 545 aa18.95■□□□□ 0.62
PRDM4-205ENST00000550376 TMCO6Q96DC7 493 aa18.95■□□□□ 0.62
PRDM4-205ENST00000550376 TMEM185BQ9H7F4 350 aa18.95■□□□□ 0.62
PRDM4-205ENST00000550376 FAIMQ9NVQ4 179 aa18.95■□□□□ 0.62
PRDM4-205ENST00000550376 ZNF229Q9UJW7 825 aa18.95■□□□□ 0.62
PRDM4-205ENST00000550376 PPIEQ9UNP9 301 aaKnown RBP18.95■□□□□ 0.62
PRDM4-205ENST00000550376 KLHDC2Q9Y2U9 406 aa18.95■□□□□ 0.62
PRDM4-205ENST00000550376 LINC00854A0A1B0GVQ3 168 aa18.94■□□□□ 0.62
PRDM4-205ENST00000550376 TAF4O00268 1085 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms