RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 RNF115Q9Y4L5 304 aa11.89□□□□□ -0.51
NUP188-211ENST00000550219 ENPP4Q9Y6X5 453 aa11.89□□□□□ -0.51
NUP188-211ENST00000550219 V9GYQ6 96 aa11.89□□□□□ -0.51
NUP188-211ENST00000550219 AP3D1O14617 1153 aa11.88□□□□□ -0.51
NUP188-211ENST00000550219 ADAP00813 363 aa11.88□□□□□ -0.51
NUP188-211ENST00000550219 IFNW1P05000 195 aa11.88□□□□□ -0.51
NUP188-211ENST00000550219 PGCP20142 388 aa11.88□□□□□ -0.51
NUP188-211ENST00000550219 HTR2AP28223 471 aa11.88□□□□□ -0.51
NUP188-211ENST00000550219 VLDLRP98155 873 aa11.88□□□□□ -0.51
NUP188-211ENST00000550219 HOXC5Q00444 222 aa11.88□□□□□ -0.51
NUP188-211ENST00000550219 CHRNB3Q05901 458 aa11.88□□□□□ -0.51
NUP188-211ENST00000550219 CBFBQ13951 182 aa11.88□□□□□ -0.51
NUP188-211ENST00000550219 TAB1Q15750 504 aa11.88□□□□□ -0.51
NUP188-211ENST00000550219 FAM98BQ52LJ0 330 aaKnown RBP11.88□□□□□ -0.51
NUP188-211ENST00000550219 SLC25A53Q5H9E4 307 aa11.88□□□□□ -0.51
NUP188-211ENST00000550219 C3orf33Q6P1S2 294 aa11.88□□□□□ -0.51
NUP188-211ENST00000550219 ATG4DQ86TL0 474 aaPredicted RBP11.88□□□□□ -0.51
NUP188-211ENST00000550219 TSPYL5Q86VY4 417 aaPredicted RBP11.88□□□□□ -0.51
NUP188-211ENST00000550219 GABRG1Q8N1C3 465 aa11.88□□□□□ -0.51
NUP188-211ENST00000550219 ZNF611Q8N823 705 aa11.88□□□□□ -0.51
NUP188-211ENST00000550219 VANGL1Q8TAA9 524 aaPredicted RBP11.88□□□□□ -0.51
NUP188-211ENST00000550219 NEUROG1Q92886 237 aa11.88□□□□□ -0.51
NUP188-211ENST00000550219 DNAJA3Q96EY1 480 aa11.88□□□□□ -0.51
NUP188-211ENST00000550219 RSRC1Q96IZ7 334 aaKnown RBP11.88□□□□□ -0.51
NUP188-211ENST00000550219 OR5B2Q96R09 309 aa11.88□□□□□ -0.51
NUP188-211ENST00000550219 SEPHS2Q99611 448 aa11.88□□□□□ -0.51
NUP188-211ENST00000550219 TRIM2Q9C040 744 aa11.88□□□□□ -0.51
NUP188-211ENST00000550219 POLR2J2Q9GZM3 115 aaKnown RBP11.88□□□□□ -0.51
NUP188-211ENST00000550219 POLR2J3Q9H1A7 115 aaKnown RBP11.88□□□□□ -0.51
NUP188-211ENST00000550219 OR10A4Q9H209 315 aa11.88□□□□□ -0.51
NUP188-211ENST00000550219 ARMC1Q9NVT9 282 aa11.88□□□□□ -0.51
NUP188-211ENST00000550219 KLHL9Q9P2J3 617 aa11.88□□□□□ -0.51
NUP188-211ENST00000550219 PRSS50Q9UI38 385 aa11.88□□□□□ -0.51
NUP188-211ENST00000550219 ENTPD5O75356 428 aa11.87□□□□□ -0.51
NUP188-211ENST00000550219 LYZL6O75951 148 aa11.87□□□□□ -0.51
NUP188-211ENST00000550219 PRSS23O95084 383 aa11.87□□□□□ -0.51
NUP188-211ENST00000550219 CD3EP07766 207 aa11.87□□□□□ -0.51
NUP188-211ENST00000550219 YES1P07947 543 aa11.87□□□□□ -0.51
NUP188-211ENST00000550219 ERFP50548 548 aa11.87□□□□□ -0.51
NUP188-211ENST00000550219 RPS4XP62701 263 aaKnown RBP11.87□□□□□ -0.51
NUP188-211ENST00000550219 PPP2R2BQ00005 443 aa11.87□□□□□ -0.51
NUP188-211ENST00000550219 SFRP5Q5T4F7 317 aa11.87□□□□□ -0.51
NUP188-211ENST00000550219 ADAM5Q6NVV9 412 aa11.87□□□□□ -0.51
NUP188-211ENST00000550219 ZFP1Q6P2D0 407 aa11.87□□□□□ -0.51
NUP188-211ENST00000550219 ZNF613Q6PF04 617 aa11.87□□□□□ -0.51
NUP188-211ENST00000550219 BHLHA15Q7RTS1 189 aaPredicted RBP11.87□□□□□ -0.51
NUP188-211ENST00000550219 RANBP3LQ86VV4 465 aaPredicted RBP11.87□□□□□ -0.51
NUP188-211ENST00000550219 ZDHHC21Q8IVQ6 265 aa11.87□□□□□ -0.51
NUP188-211ENST00000550219 KBTBD8Q8NFY9 601 aa11.87□□□□□ -0.51
NUP188-211ENST00000550219 IGFBPL1Q8WX77 278 aa11.87□□□□□ -0.51
NUP188-211ENST00000550219 ST8SIA1Q92185 356 aa11.87□□□□□ -0.51
NUP188-211ENST00000550219 FBXW5Q969U6 566 aa11.87□□□□□ -0.51
NUP188-211ENST00000550219 ZNF775Q96BV0 537 aaPredicted RBP11.87□□□□□ -0.51
NUP188-211ENST00000550219 ZNF300Q96RE9 604 aaPredicted RBP11.87□□□□□ -0.51
NUP188-211ENST00000550219 MCHR1Q99705 422 aa11.87□□□□□ -0.51
NUP188-211ENST00000550219 PSD2Q9BQI7 771 aa11.87□□□□□ -0.51
NUP188-211ENST00000550219 TMEM204Q9BSN7 226 aa11.87□□□□□ -0.51
NUP188-211ENST00000550219 PRR14Q9BWN1 585 aa11.87□□□□□ -0.51
NUP188-211ENST00000550219 CHID1Q9BWS9 393 aa11.87□□□□□ -0.51
NUP188-211ENST00000550219 POTEKPQ9BYX7 375 aa11.87□□□□□ -0.51
NUP188-211ENST00000550219 ADAM19Q9H013 955 aa11.87□□□□□ -0.51
NUP188-211ENST00000550219 ESRP2Q9H6T0 727 aaKnown RBP11.87□□□□□ -0.51
NUP188-211ENST00000550219 NGBQ9NPG2 151 aa11.87□□□□□ -0.51
NUP188-211ENST00000550219 ACER3Q9NUN7 267 aa11.87□□□□□ -0.51
NUP188-211ENST00000550219 A4GNTQ9UNA3 340 aa11.87□□□□□ -0.51
NUP188-211ENST00000550219 MAP1AP78559 2803 aaPredicted RBP11.87□□□□□ -0.51
NUP188-211ENST00000550219 DSCAMO60469 2012 aa11.86□□□□□ -0.51
NUP188-211ENST00000550219 VPS13CQ709C8 3753 aa11.86□□□□□ -0.51
NUP188-211ENST00000550219 INAFM1C9JVW0 142 aa11.86□□□□□ -0.51
NUP188-211ENST00000550219 FFAR1O14842 300 aa11.86□□□□□ -0.51
NUP188-211ENST00000550219 SMAD9O15198 467 aaKnown RBP11.86□□□□□ -0.51
NUP188-211ENST00000550219 FKBP6O75344 327 aa11.86□□□□□ -0.51
NUP188-211ENST00000550219 LYPD3O95274 346 aa11.86□□□□□ -0.51
NUP188-211ENST00000550219 FABP3P05413 133 aa11.86□□□□□ -0.51
NUP188-211ENST00000550219 TFPIP10646 304 aa11.86□□□□□ -0.51
NUP188-211ENST00000550219 UQCRBP14927 111 aa11.86□□□□□ -0.51
NUP188-211ENST00000550219 ITGA2P17301 1181 aa11.86□□□□□ -0.51
NUP188-211ENST00000550219 RHCEP18577 417 aa11.86□□□□□ -0.51
NUP188-211ENST00000550219 RYKP34925 604 aa11.86□□□□□ -0.51
NUP188-211ENST00000550219 CDKN1AP38936 164 aa11.86□□□□□ -0.51
NUP188-211ENST00000550219 SLC1A3P43003 542 aa11.86□□□□□ -0.51
NUP188-211ENST00000550219 IDH2P48735 452 aaKnown RBP11.86□□□□□ -0.51
NUP188-211ENST00000550219 SESN3P58005 492 aa11.86□□□□□ -0.51
NUP188-211ENST00000550219 ELF3P78545 371 aaPredicted RBP11.86□□□□□ -0.51
NUP188-211ENST00000550219 RASGEF1BQ0VAM2 473 aa11.86□□□□□ -0.51
NUP188-211ENST00000550219 MERTKQ12866 999 aa11.86□□□□□ -0.51
NUP188-211ENST00000550219 FAPQ12884 760 aa11.86□□□□□ -0.51
NUP188-211ENST00000550219 OR1Q1Q15612 314 aa11.86□□□□□ -0.51
NUP188-211ENST00000550219 ENTPD8Q5MY95 495 aa11.86□□□□□ -0.51
NUP188-211ENST00000550219 NCMAPQ5T1S8 102 aa11.86□□□□□ -0.51
NUP188-211ENST00000550219 WBP2NLQ6ICG8 309 aa11.86□□□□□ -0.51
NUP188-211ENST00000550219 LSRQ86X29 649 aaPredicted RBP11.86□□□□□ -0.51
NUP188-211ENST00000550219 SLC43A2Q8N370 569 aa11.86□□□□□ -0.51
NUP188-211ENST00000550219 TMEM234Q8WY98 164 aa11.86□□□□□ -0.51
NUP188-211ENST00000550219 GTPBP3Q969Y2 492 aaKnown RBP11.86□□□□□ -0.51
NUP188-211ENST00000550219 DHRS1Q96LJ7 313 aa11.86□□□□□ -0.51
NUP188-211ENST00000550219 PRRC1Q96M27 445 aa11.86□□□□□ -0.51
NUP188-211ENST00000550219 ZNF347Q96SE7 839 aa11.86□□□□□ -0.51
NUP188-211ENST00000550219 HDHD5Q9BXW7 423 aa11.86□□□□□ -0.51
NUP188-211ENST00000550219 TMEM27Q9HBJ8 222 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms