RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 MS4A18H0YCH9 400 aa17.14■□□□□ 0.33
DDX54-207ENST00000550016 CNOT4O95628 575 aaKnown RBP17.14■□□□□ 0.33
DDX54-207ENST00000550016 SEMG1P04279 462 aa17.14■□□□□ 0.33
DDX54-207ENST00000550016 HIST1H2ABP04908 130 aa17.14■□□□□ 0.33
DDX54-207ENST00000550016 ZNF43P17038 809 aa17.14■□□□□ 0.33
DDX54-207ENST00000550016 ITGA2P17301 1181 aa17.14■□□□□ 0.33
DDX54-207ENST00000550016 ATP6V1B2P21281 511 aa17.14■□□□□ 0.33
DDX54-207ENST00000550016 EDNRAP25101 427 aa17.14■□□□□ 0.33
DDX54-207ENST00000550016 RASSF2P50749 326 aa17.14■□□□□ 0.33
DDX54-207ENST00000550016 VLDLRP98155 873 aa17.14■□□□□ 0.33
DDX54-207ENST00000550016 TRAP1Q12931 704 aaKnown RBP17.14■□□□□ 0.33
DDX54-207ENST00000550016 MS4A18Q3C1V0 323 aa17.14■□□□□ 0.33
DDX54-207ENST00000550016 LCN8Q6JVE9 175 aa17.14■□□□□ 0.33
DDX54-207ENST00000550016 CASP12Q6UXS9 341 aa17.14■□□□□ 0.33
DDX54-207ENST00000550016 STAC2Q6ZMT1 411 aa17.14■□□□□ 0.33
DDX54-207ENST00000550016 Q6ZT83 130 aa17.14■□□□□ 0.33
DDX54-207ENST00000550016 HIST3H2AQ7L7L0 130 aa17.14■□□□□ 0.33
DDX54-207ENST00000550016 EPHX4Q8IUS5 362 aa17.14■□□□□ 0.33
DDX54-207ENST00000550016 GABRG1Q8N1C3 465 aa17.14■□□□□ 0.33
DDX54-207ENST00000550016 PIK3C3Q8NEB9 887 aa17.14■□□□□ 0.33
DDX54-207ENST00000550016 OR5J2Q8NH18 312 aa17.14■□□□□ 0.33
DDX54-207ENST00000550016 PFN4Q8NHR9 129 aa17.14■□□□□ 0.33
DDX54-207ENST00000550016 FAM222BQ8WU58 562 aa17.14■□□□□ 0.33
DDX54-207ENST00000550016 HIST1H2ACQ93077 130 aa17.14■□□□□ 0.33
DDX54-207ENST00000550016 MCUR1Q96AQ8 359 aa17.14■□□□□ 0.33
DDX54-207ENST00000550016 ASB9Q96DX5 294 aa17.14■□□□□ 0.33
DDX54-207ENST00000550016 ZNF385AQ96PM9 386 aaKnown RBP17.14■□□□□ 0.33
DDX54-207ENST00000550016 NMNAT1Q9HAN9 279 aaPredicted RBP17.14■□□□□ 0.33
DDX54-207ENST00000550016 MAN2C1Q9NTJ4 1040 aa17.14■□□□□ 0.33
DDX54-207ENST00000550016 NDRG3Q9UGV2 375 aa17.14■□□□□ 0.33
DDX54-207ENST00000550016 ZNF229Q9UJW7 825 aa17.14■□□□□ 0.33
DDX54-207ENST00000550016 HTR3EA5X5Y0 456 aa17.13■□□□□ 0.33
DDX54-207ENST00000550016 ENO4A6NNW6 628 aa17.13■□□□□ 0.33
DDX54-207ENST00000550016 hCG_2039718K7EN88 272 aa17.13■□□□□ 0.33
DDX54-207ENST00000550016 PLPP3O14495 311 aa17.13■□□□□ 0.33
DDX54-207ENST00000550016 DNAJC8O75937 253 aaPredicted RBP17.13■□□□□ 0.33
DDX54-207ENST00000550016 STAMBPO95630 424 aa17.13■□□□□ 0.33
DDX54-207ENST00000550016 FUT4P22083 530 aa17.13■□□□□ 0.33
DDX54-207ENST00000550016 IL1RL1Q01638 556 aa17.13■□□□□ 0.33
DDX54-207ENST00000550016 C1DQ13901 141 aaKnown RBP17.13■□□□□ 0.33
DDX54-207ENST00000550016 P2RY6Q15077 328 aa17.13■□□□□ 0.33
DDX54-207ENST00000550016 IQCCQ4KMZ1 466 aa17.13■□□□□ 0.33
DDX54-207ENST00000550016 FBXW9Q5XUX1 488 aa17.13■□□□□ 0.33
DDX54-207ENST00000550016 PGM2L1Q6PCE3 622 aa17.13■□□□□ 0.33
DDX54-207ENST00000550016 AAED1Q7RTV5 226 aa17.13■□□□□ 0.33
DDX54-207ENST00000550016 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.13■□□□□ 0.33
DDX54-207ENST00000550016 ZNF295-AS1Q8N0V1 137 aa17.13■□□□□ 0.33
DDX54-207ENST00000550016 LINC01560Q8TB33 94 aa17.13■□□□□ 0.33
DDX54-207ENST00000550016 POP5Q969H6 163 aaKnown RBP17.13■□□□□ 0.33
DDX54-207ENST00000550016 CCDC124Q96CT7 223 aaKnown RBP17.13■□□□□ 0.33
DDX54-207ENST00000550016 SGTBQ96EQ0 304 aa17.13■□□□□ 0.33
DDX54-207ENST00000550016 PIP5K1AQ99755 562 aa17.13■□□□□ 0.33
DDX54-207ENST00000550016 HDHD5Q9BXW7 423 aa17.13■□□□□ 0.33
DDX54-207ENST00000550016 ANKRD19PQ9H560 264 aa17.13■□□□□ 0.33
DDX54-207ENST00000550016 CRIM1Q9NZV1 1036 aa17.13■□□□□ 0.33
DDX54-207ENST00000550016 B3GAT1Q9P2W7 334 aa17.13■□□□□ 0.33
DDX54-207ENST00000550016 GPR52Q9Y2T5 361 aa17.13■□□□□ 0.33
DDX54-207ENST00000550016 UNC79Q9P2D8 2635 aa17.13■□□□□ 0.33
DDX54-207ENST00000550016 OR7A10O76100 309 aa17.12■□□□□ 0.33
DDX54-207ENST00000550016 OR6A2O95222 327 aa17.12■□□□□ 0.33
DDX54-207ENST00000550016 HPRP00739 348 aa17.12■□□□□ 0.33
DDX54-207ENST00000550016 ADAP00813 363 aa17.12■□□□□ 0.33
DDX54-207ENST00000550016 H1F0P07305 194 aaKnown RBP17.12■□□□□ 0.33
DDX54-207ENST00000550016 PSMB1P20618 241 aaKnown RBP17.12■□□□□ 0.33
DDX54-207ENST00000550016 PUDPQ08623 228 aa17.12■□□□□ 0.33
DDX54-207ENST00000550016 SLC46A3Q7Z3Q1 461 aa17.12■□□□□ 0.33
DDX54-207ENST00000550016 CXorf67Q86X51 503 aaPredicted RBP17.12■□□□□ 0.33
DDX54-207ENST00000550016 RNF113BQ8IZP6 322 aaKnown RBP17.12■□□□□ 0.33
DDX54-207ENST00000550016 UBE2J2Q8N2K1 259 aa17.12■□□□□ 0.33
DDX54-207ENST00000550016 LRRC17Q8N6Y2 441 aa17.12■□□□□ 0.33
DDX54-207ENST00000550016 ACOT11Q8WXI4 607 aaPredicted RBP17.12■□□□□ 0.33
DDX54-207ENST00000550016 DACH2Q96NX9 599 aa17.12■□□□□ 0.33
DDX54-207ENST00000550016 IL1RAPQ9NPH3 570 aa17.12■□□□□ 0.33
DDX54-207ENST00000550016 C20orf141Q9NUB4 165 aa17.12■□□□□ 0.33
DDX54-207ENST00000550016 NOX1Q9Y5S8 564 aa17.12■□□□□ 0.33
DDX54-207ENST00000550016 PRR14LQ5THK1 2151 aa17.11■□□□□ 0.33
DDX54-207ENST00000550016 A0A087WUU8 490 aa17.11■□□□□ 0.33
DDX54-207ENST00000550016 A0A1W2PRQ8 180 aa17.11■□□□□ 0.33
DDX54-207ENST00000550016 TCRBV5S2A0A599 114 aa17.11■□□□□ 0.33
DDX54-207ENST00000550016 SH3D21A4FU49 640 aa17.11■□□□□ 0.33
DDX54-207ENST00000550016 ACOT8O14734 319 aa17.11■□□□□ 0.33
DDX54-207ENST00000550016 GSC2O15499 205 aa17.11■□□□□ 0.33
DDX54-207ENST00000550016 DIRAS1O95057 198 aa17.11■□□□□ 0.33
DDX54-207ENST00000550016 IGHV3-9P01782 118 aa17.11■□□□□ 0.33
DDX54-207ENST00000550016 FABP3P05413 133 aa17.11■□□□□ 0.33
DDX54-207ENST00000550016 ASAH2BP0C7U1 165 aa17.11■□□□□ 0.33
DDX54-207ENST00000550016 ADORA3P0DMS8 318 aa17.11■□□□□ 0.33
DDX54-207ENST00000550016 UMPSP11172 480 aa17.11■□□□□ 0.33
DDX54-207ENST00000550016 EPXP11678 715 aa17.11■□□□□ 0.33
DDX54-207ENST00000550016 FUT1P19526 365 aa17.11■□□□□ 0.33
DDX54-207ENST00000550016 CCKARP32238 428 aa17.11■□□□□ 0.33
DDX54-207ENST00000550016 CLDN17P56750 224 aa17.11■□□□□ 0.33
DDX54-207ENST00000550016 SMIM11AP58511 58 aa17.11■□□□□ 0.33
DDX54-207ENST00000550016 ZP4Q12836 540 aa17.11■□□□□ 0.33
DDX54-207ENST00000550016 ITGADQ13349 1161 aa17.11■□□□□ 0.33
DDX54-207ENST00000550016 DGCR6Q14129 220 aa17.11■□□□□ 0.33
DDX54-207ENST00000550016 SFRP5Q5T4F7 317 aa17.11■□□□□ 0.33
DDX54-207ENST00000550016 ZNF730Q6ZMV8 503 aa17.11■□□□□ 0.33
DDX54-207ENST00000550016 PXKQ7Z7A4 578 aa17.11■□□□□ 0.33
DDX54-207ENST00000550016 ZDHHC21Q8IVQ6 265 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms