RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 KLRB1Q12918 225 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 IL18Q14116 193 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 SLC25A52Q3SY17 297 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 TIGITQ495A1 244 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 TP53I3Q53FA7 332 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 XKR7Q5GH72 579 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 C1orf220Q5T0J3 134 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 RAET1LQ5VY80 246 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 ANGPTL8Q6UXH0 198 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 BZW1Q7L1Q6 419 aaKnown RBP2.23□□□□□ -2.05
CCDC38-208ENST00000549876 DHDDSQ86SQ9 333 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 SERPINA9Q86WD7 417 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 TRIM69Q86WT6 500 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 PSTKQ8IV42 348 aaKnown RBP2.23□□□□□ -2.05
CCDC38-208ENST00000549876 LINC01561Q8N1V8 128 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 OR4C5Q8NGB2 326 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 OR2AP1Q8NGE2 309 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 OR5L2Q8NGL0 311 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 SLC22A8Q8TCC7 542 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 BLOC1S5Q8TDH9 187 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 TSEN15Q8WW01 171 aaKnown RBP2.23□□□□□ -2.05
CCDC38-208ENST00000549876 MAIP1Q8WWC4 291 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 ST8SIA1Q92185 356 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 ZNF75CPQ92670 426 aaPredicted RBP2.23□□□□□ -2.05
CCDC38-208ENST00000549876 PKNOX2Q96KN3 472 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 CFAP53Q96M91 514 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 OR5B2Q96R09 309 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 CITED1Q99966 193 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 SLC35A5Q9BS91 424 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 SPATA16Q9BXB7 569 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 POLE4Q9NR33 117 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 WRAP73Q9P2S5 460 aaPredicted RBP2.23□□□□□ -2.05
CCDC38-208ENST00000549876 PISDQ9UG56 409 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 AK6Q9Y3D8 172 aaKnown RBP2.23□□□□□ -2.05
CCDC38-208ENST00000549876 PLEKHG2Q9H7P9 1386 aa2.23□□□□□ -2.05
CCDC38-208ENST00000549876 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.23□□□□□ -2.05
CCDC38-208ENST00000549876 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.22□□□□□ -2.05
CCDC38-208ENST00000549876 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.22□□□□□ -2.05
CCDC38-208ENST00000549876 PP2D1A8MPX8 630 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 FAM25EA8MYX2 175 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 GOLGA8SH3BPF8 625 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 HAS3O00219 553 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 WRBO00258 174 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 POLR2DO15514 142 aaKnown RBP2.22□□□□□ -2.05
CCDC38-208ENST00000549876 RS1O15537 224 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 RNF13O43567 381 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 RAMP3O60896 148 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 CST1P01037 141 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 MCF2P10911 925 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 ETS2P15036 469 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 RCC1P18754 421 aaPredicted RBP2.22□□□□□ -2.05
CCDC38-208ENST00000549876 CASP14P31944 242 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 MAP3K8P41279 467 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 GYG1P46976 350 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 TPMTP51580 245 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 ATP1B3P54709 279 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 TMED1Q13445 227 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 PTGES3Q15185 160 aaKnown RBP2.22□□□□□ -2.05
CCDC38-208ENST00000549876 PPP1R7Q15435 360 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 KLHL38Q2WGJ6 581 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 LIPNQ5VXI9 398 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 RNASEKQ6P5S7 137 aaKnown RBP2.22□□□□□ -2.05
CCDC38-208ENST00000549876 TMEM107Q6UX40 140 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 ZFP2Q6ZN57 461 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 UTS2BQ765I0 119 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 TPRA1Q86W33 373 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 KIR3DL3Q8N743 410 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 FAM184AQ8NB25 1140 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 MDS2Q8NDY4 140 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 CCDC148Q8NFR7 591 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 OR52K1Q8NGK4 314 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 OR9A4Q8NGU2 314 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 MAGEE2Q8TD90 523 aaPredicted RBP2.22□□□□□ -2.05
CCDC38-208ENST00000549876 PEX13Q92968 403 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 UBE2E3Q969T4 207 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 C11orf70Q9BRQ4 267 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 RSPO3Q9BXY4 272 aaPredicted RBP2.22□□□□□ -2.05
CCDC38-208ENST00000549876 RAB34Q9BZG1 259 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 RHBGQ9H310 441 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 PPDPFQ9H3Y8 114 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 SMYD3Q9H7B4 428 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 VCPKMTQ9H867 229 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 CAB39LQ9H9S4 337 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 FANCEQ9HB96 536 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 NT5MQ9NPB1 228 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 NUDT15Q9NV35 164 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 KLHL28Q9NXS3 571 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 IKZF2Q9UKS7 526 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 KIAA1257Q9ULG3 409 aa2.22□□□□□ -2.05
CCDC38-208ENST00000549876 PRPF19Q9UMS4 504 aaKnown RBP2.22□□□□□ -2.05
CCDC38-208ENST00000549876 SAMD4AQ9UPU9 718 aaKnown RBP2.22□□□□□ -2.05
CCDC38-208ENST00000549876 CHTOPQ9Y3Y2 248 aaKnown RBP2.22□□□□□ -2.05
CCDC38-208ENST00000549876 CCDC182A6NF36 153 aa2.21□□□□□ -2.06
CCDC38-208ENST00000549876 C9JVG2 144 aa2.21□□□□□ -2.06
CCDC38-208ENST00000549876 H3BMQ9 156 aa2.21□□□□□ -2.06
CCDC38-208ENST00000549876 BOLA2-SMG1P6H3BVE0 249 aa2.21□□□□□ -2.06
CCDC38-208ENST00000549876 CDH16O75309 829 aa2.21□□□□□ -2.06
CCDC38-208ENST00000549876 DIRAS1O95057 198 aa2.21□□□□□ -2.06
CCDC38-208ENST00000549876 AP2A1O95782 977 aa2.21□□□□□ -2.06
CCDC38-208ENST00000549876 STAG3L3P0CL85 134 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms