RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 POU2F1P14859 743 aa18.88■□□□□ 0.61
VPS29-206ENST00000549578 CEACAM8P31997 349 aaPredicted RBP18.88■□□□□ 0.61
VPS29-206ENST00000549578 IL1RL1Q01638 556 aa18.88■□□□□ 0.61
VPS29-206ENST00000549578 RIPPLY2Q5TAB7 128 aa18.88■□□□□ 0.61
VPS29-206ENST00000549578 OR2A2Q6IF42 318 aa18.88■□□□□ 0.61
VPS29-206ENST00000549578 C1orf94Q6P1W5 598 aa18.88■□□□□ 0.61
VPS29-206ENST00000549578 SHQ1Q6PI26 577 aaKnown RBP18.88■□□□□ 0.61
VPS29-206ENST00000549578 OAFQ86UD1 273 aa18.88■□□□□ 0.61
VPS29-206ENST00000549578 ADPRHL1Q8NDY3 354 aa18.88■□□□□ 0.61
VPS29-206ENST00000549578 OR51A7Q8NH64 312 aa18.88■□□□□ 0.61
VPS29-206ENST00000549578 ZNF775Q96BV0 537 aaPredicted RBP18.88■□□□□ 0.61
VPS29-206ENST00000549578 CCDC120Q96HB5 630 aa18.88■□□□□ 0.61
VPS29-206ENST00000549578 TAS2R5Q9NYW4 299 aa18.88■□□□□ 0.61
VPS29-206ENST00000549578 KLHL9Q9P2J3 617 aa18.88■□□□□ 0.61
VPS29-206ENST00000549578 Q9UFV3 132 aa18.88■□□□□ 0.61
VPS29-206ENST00000549578 MYO18BQ8IUG5 2567 aa18.88■□□□□ 0.61
VPS29-206ENST00000549578 PCNX1Q96RV3 2341 aa18.87■□□□□ 0.61
VPS29-206ENST00000549578 C11orf98E9PRG8 122 aa18.87■□□□□ 0.61
VPS29-206ENST00000549578 MS4A18H0YCH9 400 aa18.87■□□□□ 0.61
VPS29-206ENST00000549578 BAG2O95816 211 aa18.87■□□□□ 0.61
VPS29-206ENST00000549578 ADORA3P0DMS8 318 aa18.87■□□□□ 0.61
VPS29-206ENST00000549578 TMIGD3P0DMS9 266 aaPredicted RBP18.87■□□□□ 0.61
VPS29-206ENST00000549578 PRKACGP22612 351 aa18.87■□□□□ 0.61
VPS29-206ENST00000549578 AHCYP23526 432 aa18.87■□□□□ 0.61
VPS29-206ENST00000549578 PUDPQ08623 228 aa18.87■□□□□ 0.61
VPS29-206ENST00000549578 SLC17A1Q14916 467 aa18.87■□□□□ 0.61
VPS29-206ENST00000549578 MS4A18Q3C1V0 323 aa18.87■□□□□ 0.61
VPS29-206ENST00000549578 GTF2IRD2BQ6EKJ0 949 aa18.87■□□□□ 0.61
VPS29-206ENST00000549578 GTF2IRD2Q86UP8 949 aa18.87■□□□□ 0.61
VPS29-206ENST00000549578 TUSC5Q8IXB3 177 aa18.87■□□□□ 0.61
VPS29-206ENST00000549578 ICA1LQ8NDH6 482 aa18.87■□□□□ 0.61
VPS29-206ENST00000549578 OR5K1Q8NHB7 308 aa18.87■□□□□ 0.61
VPS29-206ENST00000549578 GNPDA2Q8TDQ7 276 aa18.87■□□□□ 0.61
VPS29-206ENST00000549578 RND1Q92730 232 aa18.87■□□□□ 0.61
VPS29-206ENST00000549578 FEVQ99581 238 aa18.87■□□□□ 0.61
VPS29-206ENST00000549578 B3GAT1Q9P2W7 334 aa18.87■□□□□ 0.61
VPS29-206ENST00000549578 RASD1Q9Y272 281 aa18.87■□□□□ 0.61
VPS29-206ENST00000549578 J3QKU1 62 aa18.86■□□□□ 0.61
VPS29-206ENST00000549578 OR6A2O95222 327 aa18.86■□□□□ 0.61
VPS29-206ENST00000549578 ZNF23P17027 643 aa18.86■□□□□ 0.61
VPS29-206ENST00000549578 FPR3P25089 353 aa18.86■□□□□ 0.61
VPS29-206ENST00000549578 AQP2P41181 271 aa18.86■□□□□ 0.61
VPS29-206ENST00000549578 ARHGDIAP52565 204 aa18.86■□□□□ 0.61
VPS29-206ENST00000549578 SIRPAP78324 504 aa18.86■□□□□ 0.61
VPS29-206ENST00000549578 ADORA2A-AS1P86434 159 aa18.86■□□□□ 0.61
VPS29-206ENST00000549578 RPL18Q07020 188 aaKnown RBP18.86■□□□□ 0.61
VPS29-206ENST00000549578 FHL1Q13642 323 aa18.86■□□□□ 0.61
VPS29-206ENST00000549578 RCN1Q15293 331 aa18.86■□□□□ 0.61
VPS29-206ENST00000549578 CCDC71Q8IV32 467 aaPredicted RBP18.86■□□□□ 0.61
VPS29-206ENST00000549578 PQLC1Q8N2U9 271 aa18.86■□□□□ 0.61
VPS29-206ENST00000549578 OR9K2Q8NGE7 335 aa18.86■□□□□ 0.61
VPS29-206ENST00000549578 MOSPD2Q8NHP6 518 aa18.86■□□□□ 0.61
VPS29-206ENST00000549578 GTPBP3Q969Y2 492 aaKnown RBP18.86■□□□□ 0.61
VPS29-206ENST00000549578 GMPPAQ96IJ6 420 aaPredicted RBP18.86■□□□□ 0.61
VPS29-206ENST00000549578 TNFRSF13CQ96RJ3 184 aa18.86■□□□□ 0.61
VPS29-206ENST00000549578 ERRFI1Q9UJM3 462 aaPredicted RBP18.86■□□□□ 0.61
VPS29-206ENST00000549578 SLC5A6Q9Y289 635 aa18.86■□□□□ 0.61
VPS29-206ENST00000549578 HIF3AQ9Y2N7 669 aa18.86■□□□□ 0.61
VPS29-206ENST00000549578 UBR5O95071 2799 aaPredicted RBP18.86■□□□□ 0.61
VPS29-206ENST00000549578 DIDO1Q9BTC0 2240 aaKnown RBP18.86■□□□□ 0.61
VPS29-206ENST00000549578 A0A1W2PNV4 684 aa18.85■□□□□ 0.61
VPS29-206ENST00000549578 ARRDC5A6NEK1 342 aa18.85■□□□□ 0.61
VPS29-206ENST00000549578 UNC119BA6NIH7 251 aa18.85■□□□□ 0.61
VPS29-206ENST00000549578 SAC3D1A6NKF1 404 aa18.85■□□□□ 0.61
VPS29-206ENST00000549578 H0YHG0 523 aa18.85■□□□□ 0.61
VPS29-206ENST00000549578 SS18L1O75177 396 aaPredicted RBP18.85■□□□□ 0.61
VPS29-206ENST00000549578 SERPINI2O75830 405 aa18.85■□□□□ 0.61
VPS29-206ENST00000549578 VAMP5O95183 116 aa18.85■□□□□ 0.61
VPS29-206ENST00000549578 HLA-DOBP13765 273 aa18.85■□□□□ 0.61
VPS29-206ENST00000549578 AGTR1P30556 359 aa18.85■□□□□ 0.61
VPS29-206ENST00000549578 UQCRC1P31930 480 aa18.85■□□□□ 0.61
VPS29-206ENST00000549578 GSSP48637 474 aa18.85■□□□□ 0.61
VPS29-206ENST00000549578 SLC9A3P48764 834 aa18.85■□□□□ 0.61
VPS29-206ENST00000549578 SLC16A1P53985 500 aa18.85■□□□□ 0.61
VPS29-206ENST00000549578 RPS4XP62701 263 aaKnown RBP18.85■□□□□ 0.61
VPS29-206ENST00000549578 GUSBP1Q15486 140 aa18.85■□□□□ 0.61
VPS29-206ENST00000549578 ANKRD34AQ69YU3 496 aa18.85■□□□□ 0.61
VPS29-206ENST00000549578 CNEP1R1Q8N9A8 125 aa18.85■□□□□ 0.61
VPS29-206ENST00000549578 NRBF2Q96F24 287 aa18.85■□□□□ 0.61
VPS29-206ENST00000549578 ZFP3Q96NJ6 502 aa18.85■□□□□ 0.61
VPS29-206ENST00000549578 OXGR1Q96P68 337 aa18.85■□□□□ 0.61
VPS29-206ENST00000549578 NIPSNAP1Q9BPW8 284 aa18.85■□□□□ 0.61
VPS29-206ENST00000549578 SF3B5Q9BWJ5 86 aaKnown RBP18.85■□□□□ 0.61
VPS29-206ENST00000549578 BCO1Q9HAY6 547 aa18.85■□□□□ 0.61
VPS29-206ENST00000549578 GLRX2Q9NS18 164 aa18.85■□□□□ 0.61
VPS29-206ENST00000549578 OAZ3Q9UMX2 235 aa18.85■□□□□ 0.61
VPS29-206ENST00000549578 RNF6Q9Y252 685 aa18.85■□□□□ 0.61
VPS29-206ENST00000549578 IGKV3D-15A0A087WSY6 115 aa18.84■□□□□ 0.61
VPS29-206ENST00000549578 HSPB2A8KAH6 182 aa18.84■□□□□ 0.61
VPS29-206ENST00000549578 G3V2T6 193 aa18.84■□□□□ 0.61
VPS29-206ENST00000549578 RNF13O43567 381 aa18.84■□□□□ 0.61
VPS29-206ENST00000549578 YES1P07947 543 aa18.84■□□□□ 0.61
VPS29-206ENST00000549578 TSPAN19P0C672 248 aa18.84■□□□□ 0.61
VPS29-206ENST00000549578 TSPAN31Q12999 210 aa18.84■□□□□ 0.61
VPS29-206ENST00000549578 PDK3Q15120 406 aa18.84■□□□□ 0.61
VPS29-206ENST00000549578 HSPB2Q16082 182 aa18.84■□□□□ 0.61
VPS29-206ENST00000549578 ZBED5Q49AG3 693 aa18.84■□□□□ 0.61
VPS29-206ENST00000549578 HIPK1Q86Z02 1210 aa18.84■□□□□ 0.61
VPS29-206ENST00000549578 MCCC2Q9HCC0 563 aa18.84■□□□□ 0.61
VPS29-206ENST00000549578 MGAT4BQ9UQ53 548 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms