RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 SAGP10523 405 aaPredicted RBP18.78■□□□□ 0.6
CACNB3-210ENST00000548874 FPR3P25089 353 aa18.78■□□□□ 0.6
CACNB3-210ENST00000548874 UQCRC1P31930 480 aa18.78■□□□□ 0.6
CACNB3-210ENST00000548874 GSSP48637 474 aa18.78■□□□□ 0.6
CACNB3-210ENST00000548874 SLC9A3P48764 834 aa18.78■□□□□ 0.6
CACNB3-210ENST00000548874 RPS4XP62701 263 aaKnown RBP18.78■□□□□ 0.6
CACNB3-210ENST00000548874 ADORA2A-AS1P86434 159 aa18.78■□□□□ 0.6
CACNB3-210ENST00000548874 FHL1Q13642 323 aa18.78■□□□□ 0.6
CACNB3-210ENST00000548874 POU4F3Q15319 338 aa18.78■□□□□ 0.6
CACNB3-210ENST00000548874 MS4A18Q3C1V0 323 aa18.78■□□□□ 0.6
CACNB3-210ENST00000548874 MTFR2Q6P444 385 aa18.78■□□□□ 0.6
CACNB3-210ENST00000548874 SHQ1Q6PI26 577 aaKnown RBP18.78■□□□□ 0.6
CACNB3-210ENST00000548874 NANOGNBQ7Z5D8 188 aa18.78■□□□□ 0.6
CACNB3-210ENST00000548874 MED12LQ86YW9 2145 aa18.78■□□□□ 0.6
CACNB3-210ENST00000548874 GCNT2Q8N0V5 402 aa18.78■□□□□ 0.6
CACNB3-210ENST00000548874 OR10G2Q8NGC3 310 aa18.78■□□□□ 0.6
CACNB3-210ENST00000548874 GIPC3Q8TF64 312 aa18.78■□□□□ 0.6
CACNB3-210ENST00000548874 RND1Q92730 232 aa18.78■□□□□ 0.6
CACNB3-210ENST00000548874 INTS12Q96CB8 462 aaKnown RBP18.78■□□□□ 0.6
CACNB3-210ENST00000548874 CENPNQ96H22 339 aaPredicted RBP18.78■□□□□ 0.6
CACNB3-210ENST00000548874 PKP2Q99959 881 aa18.78■□□□□ 0.6
CACNB3-210ENST00000548874 TAS2R5Q9NYW4 299 aa18.78■□□□□ 0.6
CACNB3-210ENST00000548874 KLHL13Q9P2N7 655 aa18.78■□□□□ 0.6
CACNB3-210ENST00000548874 Q9UFV3 132 aa18.78■□□□□ 0.6
CACNB3-210ENST00000548874 ERRFI1Q9UJM3 462 aaPredicted RBP18.78■□□□□ 0.6
CACNB3-210ENST00000548874 SLC5A6Q9Y289 635 aa18.78■□□□□ 0.6
CACNB3-210ENST00000548874 HIF3AQ9Y2N7 669 aa18.78■□□□□ 0.6
CACNB3-210ENST00000548874 HSPB2A8KAH6 182 aa18.77■□□□□ 0.6
CACNB3-210ENST00000548874 ZNF724A8MTY0 619 aa18.77■□□□□ 0.6
CACNB3-210ENST00000548874 HPRP00739 348 aa18.77■□□□□ 0.6
CACNB3-210ENST00000548874 HIST1H2ABP04908 130 aa18.77■□□□□ 0.6
CACNB3-210ENST00000548874 TMIGD3P0DMS9 266 aaPredicted RBP18.77■□□□□ 0.6
CACNB3-210ENST00000548874 PER3P56645 1201 aa18.77■□□□□ 0.6
CACNB3-210ENST00000548874 PUDPQ08623 228 aa18.77■□□□□ 0.6
CACNB3-210ENST00000548874 ZP4Q12836 540 aa18.77■□□□□ 0.6
CACNB3-210ENST00000548874 FOXF2Q12947 444 aa18.77■□□□□ 0.6
CACNB3-210ENST00000548874 HSPB2Q16082 182 aa18.77■□□□□ 0.6
CACNB3-210ENST00000548874 ANKDD1AQ495B1 522 aa18.77■□□□□ 0.6
CACNB3-210ENST00000548874 TMEM225Q6GV28 225 aa18.77■□□□□ 0.6
CACNB3-210ENST00000548874 HIST3H2AQ7L7L0 130 aa18.77■□□□□ 0.6
CACNB3-210ENST00000548874 MCEMP1Q8IX19 187 aa18.77■□□□□ 0.6
CACNB3-210ENST00000548874 HS3ST5Q8IZT8 346 aa18.77■□□□□ 0.6
CACNB3-210ENST00000548874 OR13C2Q8NGS9 318 aa18.77■□□□□ 0.6
CACNB3-210ENST00000548874 OR5K1Q8NHB7 308 aa18.77■□□□□ 0.6
CACNB3-210ENST00000548874 HIST1H2ACQ93077 130 aa18.77■□□□□ 0.6
CACNB3-210ENST00000548874 OXGR1Q96P68 337 aa18.77■□□□□ 0.6
CACNB3-210ENST00000548874 TACO1Q9BSH4 297 aaKnown RBP18.77■□□□□ 0.6
CACNB3-210ENST00000548874 CLEC4AQ9UMR7 237 aa18.77■□□□□ 0.6
CACNB3-210ENST00000548874 GASTP01350 101 aa18.76■□□□□ 0.59
CACNB3-210ENST00000548874 KIR2DL2P43627 348 aaPredicted RBP18.76■□□□□ 0.59
CACNB3-210ENST00000548874 TSPAN31Q12999 210 aa18.76■□□□□ 0.59
CACNB3-210ENST00000548874 NHLRC1Q6VVB1 395 aa18.76■□□□□ 0.59
CACNB3-210ENST00000548874 FAM214BQ7L5A3 538 aa18.76■□□□□ 0.59
CACNB3-210ENST00000548874 OAFQ86UD1 273 aa18.76■□□□□ 0.59
CACNB3-210ENST00000548874 TUSC5Q8IXB3 177 aa18.76■□□□□ 0.59
CACNB3-210ENST00000548874 KDM8Q8N371 416 aa18.76■□□□□ 0.59
CACNB3-210ENST00000548874 AQP11Q8NBQ7 271 aa18.76■□□□□ 0.59
CACNB3-210ENST00000548874 OR9K2Q8NGE7 335 aa18.76■□□□□ 0.59
CACNB3-210ENST00000548874 GNPDA2Q8TDQ7 276 aa18.76■□□□□ 0.59
CACNB3-210ENST00000548874 DGCR6LQ9BY27 220 aa18.76■□□□□ 0.59
CACNB3-210ENST00000548874 PDP1Q9P0J1 537 aaPredicted RBP18.76■□□□□ 0.59
CACNB3-210ENST00000548874 MGAT4BQ9UQ53 548 aa18.76■□□□□ 0.59
CACNB3-210ENST00000548874 FLVCR1Q9Y5Y0 555 aa18.76■□□□□ 0.59
CACNB3-210ENST00000548874 MYO7BQ6PIF6 2116 aa18.76■□□□□ 0.59
CACNB3-210ENST00000548874 NCOA6Q14686 2063 aaPredicted RBP18.75■□□□□ 0.59
CACNB3-210ENST00000548874 TRAV27A0A087WT01 109 aa18.75■□□□□ 0.59
CACNB3-210ENST00000548874 UNC119BA6NIH7 251 aa18.75■□□□□ 0.59
CACNB3-210ENST00000548874 GPR171O14626 319 aa18.75■□□□□ 0.59
CACNB3-210ENST00000548874 PTP4A3O75365 173 aa18.75■□□□□ 0.59
CACNB3-210ENST00000548874 TNFSF13O75888 250 aa18.75■□□□□ 0.59
CACNB3-210ENST00000548874 IL18BPO95998 194 aa18.75■□□□□ 0.59
CACNB3-210ENST00000548874 PLGP00747 810 aaPredicted RBP18.75■□□□□ 0.59
CACNB3-210ENST00000548874 YES1P07947 543 aa18.75■□□□□ 0.59
CACNB3-210ENST00000548874 ADORA3P0DMS8 318 aa18.75■□□□□ 0.59
CACNB3-210ENST00000548874 CTSSP25774 331 aa18.75■□□□□ 0.59
CACNB3-210ENST00000548874 AGTR1P30556 359 aa18.75■□□□□ 0.59
CACNB3-210ENST00000548874 ARHGDIAP52565 204 aa18.75■□□□□ 0.59
CACNB3-210ENST00000548874 RPL18Q07020 188 aaKnown RBP18.75■□□□□ 0.59
CACNB3-210ENST00000548874 PXKQ7Z7A4 578 aa18.75■□□□□ 0.59
CACNB3-210ENST00000548874 GPAT4Q86UL3 456 aa18.75■□□□□ 0.59
CACNB3-210ENST00000548874 PQLC1Q8N2U9 271 aa18.75■□□□□ 0.59
CACNB3-210ENST00000548874 ZIC4Q8N9L1 334 aa18.75■□□□□ 0.59
CACNB3-210ENST00000548874 MOSPD2Q8NHP6 518 aa18.75■□□□□ 0.59
CACNB3-210ENST00000548874 TNFRSF13CQ96RJ3 184 aa18.75■□□□□ 0.59
CACNB3-210ENST00000548874 FEVQ99581 238 aa18.75■□□□□ 0.59
CACNB3-210ENST00000548874 SFXN3Q9BWM7 321 aa18.75■□□□□ 0.59
CACNB3-210ENST00000548874 SEMA6AQ9H2E6 1030 aa18.75■□□□□ 0.59
CACNB3-210ENST00000548874 MCCC2Q9HCC0 563 aa18.75■□□□□ 0.59
CACNB3-210ENST00000548874 EMC3Q9P0I2 261 aa18.75■□□□□ 0.59
CACNB3-210ENST00000548874 RNF6Q9Y252 685 aa18.75■□□□□ 0.59
CACNB3-210ENST00000548874 SIGLEC7Q9Y286 467 aa18.75■□□□□ 0.59
CACNB3-210ENST00000548874 MAGED1Q9Y5V3 778 aaPredicted RBP18.75■□□□□ 0.59
CACNB3-210ENST00000548874 BLOC1S5-TXNDC5H3BN57 136 aa18.74■□□□□ 0.59
CACNB3-210ENST00000548874 TRAF3IP2O43734 574 aaPredicted RBP18.74■□□□□ 0.59
CACNB3-210ENST00000548874 OR6A2O95222 327 aa18.74■□□□□ 0.59
CACNB3-210ENST00000548874 ADAP00813 363 aa18.74■□□□□ 0.59
CACNB3-210ENST00000548874 ZNF26P17031 533 aaPredicted RBP18.74■□□□□ 0.59
CACNB3-210ENST00000548874 AQP2P41181 271 aa18.74■□□□□ 0.59
CACNB3-210ENST00000548874 FXYD6P3P58550 94 aa18.74■□□□□ 0.59
CACNB3-210ENST00000548874 ZBED5Q49AG3 693 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms