RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 DUX3Q96PT4 197 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 VAT1Q99536 393 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 TRAF4Q9BUZ4 470 aaPredicted RBP3.62□□□□□ -1.83
CBX5-203ENST00000547872 CARD6Q9BX69 1037 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 ERVK-6Q9BXR3 956 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 PRRG4Q9BZD6 226 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 CHMP1AQ9HD42 196 aaPredicted RBP3.62□□□□□ -1.83
CBX5-203ENST00000547872 GAGE2DQ9UEU5 116 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 ERVK-19Q9WJR5 959 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 MMACHCQ9Y4U1 282 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 PPIAL4AQ9Y536 164 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 SLC22A7Q9Y694 548 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 CHCHD2Q9Y6H1 151 aaPredicted RBP3.62□□□□□ -1.83
CBX5-203ENST00000547872 USF3Q68DE3 2245 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 TLN2Q9Y4G6 2542 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 DNAJC13O75165 2243 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 A0A1W2PR80 420 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 TRIM77I1YAP6 450 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 CTDSP2O14595 271 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 ABCD4O14678 606 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 OR10H2O60403 315 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 TRIM3O75382 744 aaPredicted RBP3.61□□□□□ -1.83
CBX5-203ENST00000547872 PSIP1O75475 530 aaKnown RBP3.61□□□□□ -1.83
CBX5-203ENST00000547872 C1QAP02745 245 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 OPN1LWP04000 364 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 HPNP05981 417 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 DANCRP0C864 163 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 SELLP14151 372 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 GNAZP19086 355 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 IL32P24001 234 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 NMBRP28336 390 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 GCH1P30793 250 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 GRIA1P42261 906 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 TTPAP49638 278 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 CTBP2P56545 445 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 RAB38P57729 211 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 PLA2G7Q13093 441 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 STX5Q13190 355 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 PON3Q15166 354 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 SGCBQ16585 318 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 NRF1Q16656 503 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 RAET1LQ5VY80 246 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 ADNP2Q6IQ32 1131 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 KLC3Q6P597 504 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 PCGF5Q86SE9 256 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 PRUNE1Q86TP1 453 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 TBC1D19Q8N5T2 526 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 STPG4Q8N801 248 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 PRELID2Q8N945 189 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 FNDC9Q8TBE3 224 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 ACTL9Q8TC94 416 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 ZPLD1Q8TCW7 415 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 C10orf105Q8TEF2 133 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 ZNF721Q8TF20 911 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 ZNF418Q8TF45 676 aaPredicted RBP3.61□□□□□ -1.83
CBX5-203ENST00000547872 ZNF473Q8WTR7 871 aaKnown RBP3.61□□□□□ -1.83
CBX5-203ENST00000547872 PTPMT1Q8WUK0 201 aaPredicted RBP3.61□□□□□ -1.83
CBX5-203ENST00000547872 TM4SF19Q96DZ7 209 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 ZFP3Q96NJ6 502 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 ANP32EQ9BTT0 268 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 RTN4RQ9BZR6 473 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 GHITMQ9H3K2 345 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 EHD1Q9H4M9 534 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 LRRC40Q9H9A6 602 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 QPCTLQ9NXS2 382 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 PTTG2Q9NZH5 202 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 CHMP5Q9NZZ3 219 aa3.61□□□□□ -1.83
CBX5-203ENST00000547872 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.61□□□□□ -1.83
CBX5-203ENST00000547872 MRPS33Q9Y291 106 aaKnown RBP3.61□□□□□ -1.83
CBX5-203ENST00000547872 hCG_1818297A0A087WSY0 165 aa3.6□□□□□ -1.83
CBX5-203ENST00000547872 NPIPA5A0A0B4J1W7 369 aa3.6□□□□□ -1.83
CBX5-203ENST00000547872 IQANK1A0A1B0GTG1 560 aa3.6□□□□□ -1.83
CBX5-203ENST00000547872 A0A1W2PQ09 198 aa3.6□□□□□ -1.83
CBX5-203ENST00000547872 TMEM89A2RUT3 159 aa3.6□□□□□ -1.83
CBX5-203ENST00000547872 URADA6NGE7 173 aa3.6□□□□□ -1.83
CBX5-203ENST00000547872 FRG2CA6NGY1 282 aa3.6□□□□□ -1.83
CBX5-203ENST00000547872 PMS2P5A8MQ11 134 aa3.6□□□□□ -1.83
CBX5-203ENST00000547872 HACD1B0YJ81 288 aa3.6□□□□□ -1.83
CBX5-203ENST00000547872 SMIM1B2RUZ4 78 aa3.6□□□□□ -1.83
CBX5-203ENST00000547872 NPIPA7E9PJI5 369 aa3.6□□□□□ -1.83
CBX5-203ENST00000547872 SAP18O00422 153 aaKnown RBP3.6□□□□□ -1.83
CBX5-203ENST00000547872 RTCAO00442 366 aaKnown RBP3.6□□□□□ -1.83
CBX5-203ENST00000547872 TP53I11O14683 189 aa3.6□□□□□ -1.83
CBX5-203ENST00000547872 ZBTB14O43829 449 aa3.6□□□□□ -1.83
CBX5-203ENST00000547872 GPR137BO60478 399 aa3.6□□□□□ -1.83
CBX5-203ENST00000547872 CIDEAO60543 219 aa3.6□□□□□ -1.83
CBX5-203ENST00000547872 ACTL6AO96019 429 aa3.6□□□□□ -1.83
CBX5-203ENST00000547872 CD8AP01732 235 aa3.6□□□□□ -1.83
CBX5-203ENST00000547872 H1F0P07305 194 aaKnown RBP3.6□□□□□ -1.83
CBX5-203ENST00000547872 NUDT17P0C025 328 aa3.6□□□□□ -1.83
CBX5-203ENST00000547872 H2AFZP0C0S5 128 aa3.6□□□□□ -1.83
CBX5-203ENST00000547872 NPIPA8P0DM63 369 aa3.6□□□□□ -1.83
CBX5-203ENST00000547872 VPREB1P12018 145 aa3.6□□□□□ -1.83
CBX5-203ENST00000547872 LHX2P50458 406 aa3.6□□□□□ -1.83
CBX5-203ENST00000547872 FABP6P51161 128 aa3.6□□□□□ -1.83
CBX5-203ENST00000547872 LIM2P55344 173 aa3.6□□□□□ -1.83
CBX5-203ENST00000547872 MYL5Q02045 173 aa3.6□□□□□ -1.83
CBX5-203ENST00000547872 ARHGAP19Q14CB8 494 aa3.6□□□□□ -1.83
CBX5-203ENST00000547872 FAM98BQ52LJ0 330 aaKnown RBP3.6□□□□□ -1.83
CBX5-203ENST00000547872 PIGGQ5H8A4 983 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms