RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 TCRBV3S1A0A5B6 114 aa18.18■□□□□ 0.5
HMGA2-211ENST00000545998 DHRS12A0PJE2 317 aa18.18■□□□□ 0.5
HMGA2-211ENST00000545998 A8MXE2 369 aa18.18■□□□□ 0.5
HMGA2-211ENST00000545998 ASAH2BP0C7U1 165 aa18.18■□□□□ 0.5
HMGA2-211ENST00000545998 RAP2AP10114 183 aa18.18■□□□□ 0.5
HMGA2-211ENST00000545998 UMPSP11172 480 aa18.18■□□□□ 0.5
HMGA2-211ENST00000545998 GRNP28799 593 aaKnown RBP18.18■□□□□ 0.5
HMGA2-211ENST00000545998 POU4F3Q15319 338 aa18.18■□□□□ 0.5
HMGA2-211ENST00000545998 PODNL1Q6PEZ8 512 aa18.18■□□□□ 0.5
HMGA2-211ENST00000545998 TBPL2Q6SJ96 375 aa18.18■□□□□ 0.5
HMGA2-211ENST00000545998 MBOAT2Q6ZWT7 520 aa18.18■□□□□ 0.5
HMGA2-211ENST00000545998 GALNT5Q7Z7M9 940 aa18.18■□□□□ 0.5
HMGA2-211ENST00000545998 SPATA24Q86W54 205 aa18.18■□□□□ 0.5
HMGA2-211ENST00000545998 LRRC17Q8N6Y2 441 aa18.18■□□□□ 0.5
HMGA2-211ENST00000545998 ZIC4Q8N9L1 334 aa18.18■□□□□ 0.5
HMGA2-211ENST00000545998 SGTBQ96EQ0 304 aa18.18■□□□□ 0.5
HMGA2-211ENST00000545998 C12orf49Q9H741 205 aa18.18■□□□□ 0.5
HMGA2-211ENST00000545998 B3GAT1Q9P2W7 334 aa18.18■□□□□ 0.5
HMGA2-211ENST00000545998 FLNBO75369 2602 aaKnown RBP18.18■□□□□ 0.5
HMGA2-211ENST00000545998 CELSR2Q9HCU4 2923 aa18.18■□□□□ 0.5
HMGA2-211ENST00000545998 TRBV4-1A0A0J9YWV2 114 aa18.17■□□□□ 0.5
HMGA2-211ENST00000545998 HTR3EA5X5Y0 456 aa18.17■□□□□ 0.5
HMGA2-211ENST00000545998 PRSS44E7EML9 344 aa18.17■□□□□ 0.5
HMGA2-211ENST00000545998 MS4A18H0YCH9 400 aa18.17■□□□□ 0.5
HMGA2-211ENST00000545998 C19orf84I3L1E1 186 aa18.17■□□□□ 0.5
HMGA2-211ENST00000545998 PLPP3O14495 311 aa18.17■□□□□ 0.5
HMGA2-211ENST00000545998 OR7A10O76100 309 aa18.17■□□□□ 0.5
HMGA2-211ENST00000545998 NTF4P34130 210 aa18.17■□□□□ 0.5
HMGA2-211ENST00000545998 SMIM11AP58511 58 aa18.17■□□□□ 0.5
HMGA2-211ENST00000545998 SPIBQ01892 262 aa18.17■□□□□ 0.5
HMGA2-211ENST00000545998 MS4A18Q3C1V0 323 aa18.17■□□□□ 0.5
HMGA2-211ENST00000545998 FGD3Q5JSP0 725 aa18.17■□□□□ 0.5
HMGA2-211ENST00000545998 ZNF474Q6S9Z5 364 aaPredicted RBP18.17■□□□□ 0.5
HMGA2-211ENST00000545998 ZNF730Q6ZMV8 503 aa18.17■□□□□ 0.5
HMGA2-211ENST00000545998 NRMQ8IXM6 262 aa18.17■□□□□ 0.5
HMGA2-211ENST00000545998 KDM8Q8N371 416 aa18.17■□□□□ 0.5
HMGA2-211ENST00000545998 ZNF610Q8N9Z0 462 aa18.17■□□□□ 0.5
HMGA2-211ENST00000545998 OR5J2Q8NH18 312 aa18.17■□□□□ 0.5
HMGA2-211ENST00000545998 OR52J3Q8NH60 311 aa18.17■□□□□ 0.5
HMGA2-211ENST00000545998 CANT1Q8WVQ1 401 aa18.17■□□□□ 0.5
HMGA2-211ENST00000545998 LIPHQ8WWY8 451 aa18.17■□□□□ 0.5
HMGA2-211ENST00000545998 BPIFA2Q96DR5 249 aa18.17■□□□□ 0.5
HMGA2-211ENST00000545998 NPDC1Q9NQX5 325 aaPredicted RBP18.17■□□□□ 0.5
HMGA2-211ENST00000545998 NOSIPQ9Y314 301 aaKnown RBP18.17■□□□□ 0.5
HMGA2-211ENST00000545998 DCHS2Q6V1P9 2916 aa18.17■□□□□ 0.5
HMGA2-211ENST00000545998 LOC102725191A0A1B0GVB3 256 aa18.17■□□□□ 0.5
HMGA2-211ENST00000545998 GADD45GO95257 159 aa18.17■□□□□ 0.5
HMGA2-211ENST00000545998 IFI30P13284 250 aa18.17■□□□□ 0.5
HMGA2-211ENST00000545998 NQO1P15559 274 aaKnown RBP18.17■□□□□ 0.5
HMGA2-211ENST00000545998 FUT1P19526 365 aa18.17■□□□□ 0.5
HMGA2-211ENST00000545998 RRM2P31350 389 aa18.17■□□□□ 0.5
HMGA2-211ENST00000545998 PRKCDQ05655 676 aa18.17■□□□□ 0.5
HMGA2-211ENST00000545998 GABPB1Q06547 395 aaPredicted RBP18.17■□□□□ 0.5
HMGA2-211ENST00000545998 PMS2P3Q13401 168 aa18.17■□□□□ 0.5
HMGA2-211ENST00000545998 TFAP2EQ6VUC0 442 aa18.17■□□□□ 0.5
HMGA2-211ENST00000545998 CREB3L2Q70SY1 520 aa18.17■□□□□ 0.5
HMGA2-211ENST00000545998 YTHDF3Q7Z739 585 aaKnown RBP18.17■□□□□ 0.5
HMGA2-211ENST00000545998 RNASE6Q93091 150 aaKnown RBP18.17■□□□□ 0.5
HMGA2-211ENST00000545998 OXGR1Q96P68 337 aa18.17■□□□□ 0.5
HMGA2-211ENST00000545998 RBM24Q9BX46 236 aaKnown RBP18.17■□□□□ 0.5
HMGA2-211ENST00000545998 PLEKHB1Q9UF11 243 aaPredicted RBP18.17■□□□□ 0.5
HMGA2-211ENST00000545998 AURKCQ9UQB9 309 aa18.17■□□□□ 0.5
HMGA2-211ENST00000545998 PKDREJQ9NTG1 2253 aa18.16■□□□□ 0.5
HMGA2-211ENST00000545998 HPRP00739 348 aa18.16■□□□□ 0.5
HMGA2-211ENST00000545998 HOXB6P17509 224 aaKnown RBP18.16■□□□□ 0.5
HMGA2-211ENST00000545998 EDNRAP25101 427 aa18.16■□□□□ 0.5
HMGA2-211ENST00000545998 OR3A2P47893 321 aa18.16■□□□□ 0.5
HMGA2-211ENST00000545998 PUDPQ08623 228 aa18.16■□□□□ 0.5
HMGA2-211ENST00000545998 SEC23BQ15437 767 aa18.16■□□□□ 0.5
HMGA2-211ENST00000545998 C1orf146Q5VVC0 180 aa18.16■□□□□ 0.5
HMGA2-211ENST00000545998 EPHX4Q8IUS5 362 aa18.16■□□□□ 0.5
HMGA2-211ENST00000545998 TMEM45BQ96B21 275 aa18.16■□□□□ 0.5
HMGA2-211ENST00000545998 ZNF385AQ96PM9 386 aaKnown RBP18.16■□□□□ 0.5
HMGA2-211ENST00000545998 CHID1Q9BWS9 393 aa18.16■□□□□ 0.5
HMGA2-211ENST00000545998 FANCFQ9NPI8 374 aa18.16■□□□□ 0.5
HMGA2-211ENST00000545998 TAS2R5Q9NYW4 299 aa18.16■□□□□ 0.5
HMGA2-211ENST00000545998 HIST1H2ABP04908 130 aa18.15■□□□□ 0.5
HMGA2-211ENST00000545998 MAKP20794 623 aa18.15■□□□□ 0.5
HMGA2-211ENST00000545998 ERFP50548 548 aa18.15■□□□□ 0.5
HMGA2-211ENST00000545998 HIST3H2AQ7L7L0 130 aa18.15■□□□□ 0.5
HMGA2-211ENST00000545998 HIST1H2ACQ93077 130 aa18.15■□□□□ 0.5
HMGA2-211ENST00000545998 LRRC46Q96FV0 321 aa18.15■□□□□ 0.5
HMGA2-211ENST00000545998 GALNT8Q9NY28 637 aa18.15■□□□□ 0.5
HMGA2-211ENST00000545998 FOXD3Q9UJU5 478 aaPredicted RBP18.15■□□□□ 0.5
HMGA2-211ENST00000545998 SH3PXD2BA1X283 911 aa18.14■□□□□ 0.49
HMGA2-211ENST00000545998 MRPL33O75394 65 aaKnown RBP18.14■□□□□ 0.49
HMGA2-211ENST00000545998 KRT36O76013 467 aa18.14■□□□□ 0.49
HMGA2-211ENST00000545998 TSPAN19P0C672 248 aa18.14■□□□□ 0.49
HMGA2-211ENST00000545998 ADORA3P0DMS8 318 aa18.14■□□□□ 0.49
HMGA2-211ENST00000545998 ZNF43P17038 809 aa18.14■□□□□ 0.49
HMGA2-211ENST00000545998 LIMS1P48059 325 aa18.14■□□□□ 0.49
HMGA2-211ENST00000545998 HMGA2P52926 109 aa18.14■□□□□ 0.49
HMGA2-211ENST00000545998 ZP4Q12836 540 aa18.14■□□□□ 0.49
HMGA2-211ENST00000545998 NHLRC1Q6VVB1 395 aa18.14■□□□□ 0.49
HMGA2-211ENST00000545998 RRM2BQ7LG56 351 aa18.14■□□□□ 0.49
HMGA2-211ENST00000545998 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.14■□□□□ 0.49
HMGA2-211ENST00000545998 NANOGNBQ7Z5D8 188 aa18.14■□□□□ 0.49
HMGA2-211ENST00000545998 STK32CQ86UX6 486 aa18.14■□□□□ 0.49
HMGA2-211ENST00000545998 MEX3DQ86XN8 651 aaKnown RBP18.14■□□□□ 0.49
HMGA2-211ENST00000545998 SLCO4A1Q96BD0 722 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms