RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 Q9H521 79 aa14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 RNF122Q9H9V4 155 aa14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 GLRX2Q9NS18 164 aa14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 SPRR3Q9UBC9 169 aa14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 RAB26Q9ULW5 256 aa14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 HSPE1-MOB4S4R3N1 261 aa14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 KMT2BQ9UMN6 2715 aaPredicted RBP14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 ARHGAP21Q5T5U3 1957 aa14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 A0A1W2PNR3 127 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 CENPBD1B2RD01 187 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 E9PQ18 207 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 M0R3G1 203 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 PLPP3O14495 311 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 TNFSF11O14788 317 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 AKAP8O43823 692 aaKnown RBP14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 IGHMP01871 453 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 SHC1P29353 583 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 PTGS2P35354 604 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 EIF1AXP47813 144 aaKnown RBP14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 SLC16A1P53985 500 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 CLDN15P56746 228 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 FHL1Q13642 323 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 RNPS1Q15287 305 aaKnown RBP14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 ABLIM2Q6H8Q1 611 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 P3H2Q8IVL5 708 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 DEPDC4Q8N2C3 294 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 LNX2Q8N448 690 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 SETD9Q8NE22 299 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 TRUB1Q8WWH5 349 aaKnown RBP14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 SNX18Q96RF0 628 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 ADI1Q9BV57 179 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 TOR3AQ9H497 397 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 MCCC2Q9HCC0 563 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 NRIP3Q9NQ35 241 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 TBC1D23Q9NUY8 699 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 POLEQ07864 2286 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 ZFYVE26Q68DK2 2539 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 ZAR1LA6NP61 321 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 DLGAP1O14490 977 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 GPR171O14626 319 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 AHCYL1O43865 530 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 MPZL2O60487 215 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 CYTIPO60759 359 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 TXNDC12O95881 172 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 TP53P04637 393 aaPredicted RBP14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 CD14P08571 375 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 ADORA3P0DMS8 318 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 NR2C1P13056 603 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 GRK5P34947 590 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 GIPRP48546 466 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 STARP49675 285 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 DAP3P51398 398 aaKnown RBP14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 SUCLG1P53597 346 aaKnown RBP14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 FOXD4Q12950 439 aaPredicted RBP14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 UBQLNLQ8IYU4 475 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 CISD2Q8N5K1 135 aaKnown RBP14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 OR51A7Q8NH64 312 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 ADAD1Q96M93 576 aaKnown RBP14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 ZFP3Q96NJ6 502 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 OXGR1Q96P68 337 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 SLC38A2Q96QD8 506 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 TNFRSF13CQ96RJ3 184 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 CALHM2Q9HA72 323 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 INIPQ9NRY2 104 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 KLHL9Q9P2J3 617 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 NDRG4Q9ULP0 352 aaKnown RBP14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 CAMK2AQ9UQM7 478 aa14.34□□□□□ -0.11
PRPF40A-212ENST00000545856 SHANK1Q9Y566 2161 aa14.33□□□□□ -0.12
PRPF40A-212ENST00000545856 IGKV3D-15A0A087WSY6 115 aa14.33□□□□□ -0.12
PRPF40A-212ENST00000545856 TRAV27A0A087WT01 109 aa14.33□□□□□ -0.12
PRPF40A-212ENST00000545856 A0A1B0GTH9 108 aa14.33□□□□□ -0.12
PRPF40A-212ENST00000545856 A0A1W2PRG6 482 aa14.33□□□□□ -0.12
PRPF40A-212ENST00000545856 CD8B2A6NJW9 211 aa14.33□□□□□ -0.12
PRPF40A-212ENST00000545856 TTLL8A6PVC2 850 aa14.33□□□□□ -0.12
PRPF40A-212ENST00000545856 BLOC1S5-TXNDC5H3BN57 136 aa14.33□□□□□ -0.12
PRPF40A-212ENST00000545856 CXCL13O43927 109 aa14.33□□□□□ -0.12
PRPF40A-212ENST00000545856 SNAP29O95721 258 aa14.33□□□□□ -0.12
PRPF40A-212ENST00000545856 CAPGP40121 348 aa14.33□□□□□ -0.12
PRPF40A-212ENST00000545856 P2RY4P51582 365 aa14.33□□□□□ -0.12
PRPF40A-212ENST00000545856 AQP4P55087 323 aa14.33□□□□□ -0.12
PRPF40A-212ENST00000545856 CDC42P60953 191 aa14.33□□□□□ -0.12
PRPF40A-212ENST00000545856 CDK5Q00535 292 aa14.33□□□□□ -0.12
PRPF40A-212ENST00000545856 IL1RL1Q01638 556 aa14.33□□□□□ -0.12
PRPF40A-212ENST00000545856 RPL18Q07020 188 aaKnown RBP14.33□□□□□ -0.12
PRPF40A-212ENST00000545856 PTGES3Q15185 160 aaKnown RBP14.33□□□□□ -0.12
PRPF40A-212ENST00000545856 SLX4IPQ5VYV7 408 aa14.33□□□□□ -0.12
PRPF40A-212ENST00000545856 TMEM225Q6GV28 225 aa14.33□□□□□ -0.12
PRPF40A-212ENST00000545856 OR2A2Q6IF42 318 aa14.33□□□□□ -0.12
PRPF40A-212ENST00000545856 ADCK1Q86TW2 530 aa14.33□□□□□ -0.12
PRPF40A-212ENST00000545856 KIF18BQ86Y91 864 aa14.33□□□□□ -0.12
PRPF40A-212ENST00000545856 LRRC17Q8N6Y2 441 aa14.33□□□□□ -0.12
PRPF40A-212ENST00000545856 LRRC75AQ8NAA5 344 aa14.33□□□□□ -0.12
PRPF40A-212ENST00000545856 ST6GALNAC3Q8NDV1 305 aa14.33□□□□□ -0.12
PRPF40A-212ENST00000545856 FAM57AQ8TBR7 257 aa14.33□□□□□ -0.12
PRPF40A-212ENST00000545856 FNDC8Q8TC99 324 aa14.33□□□□□ -0.12
PRPF40A-212ENST00000545856 RNF128Q8TEB7 428 aa14.33□□□□□ -0.12
PRPF40A-212ENST00000545856 TFAP2CQ92754 450 aa14.33□□□□□ -0.12
PRPF40A-212ENST00000545856 APOL4Q9BPW4 351 aa14.33□□□□□ -0.12
PRPF40A-212ENST00000545856 RIBC2Q9H4K1 309 aa14.33□□□□□ -0.12
PRPF40A-212ENST00000545856 TAS2R5Q9NYW4 299 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms