RNA–Protein interactions for RNA: ENST00000545459.5

LPCAT3-212, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-212ENST00000545459 IQCCQ4KMZ1 466 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 HIKESHIQ53FT3 197 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 ATAD3BQ5T9A4 648 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 AP1ARQ63HQ0 302 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 OR4F3Q6IEY1 312 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 TYW3Q6IPR3 259 aaKnown RBP3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 TNFAIP8L2Q6P589 184 aaPredicted RBP3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 EMBQ6PCB8 327 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 KLHL24Q6TFL4 600 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 FRRS1Q6ZNA5 592 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 LHFPL2Q6ZUX7 228 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 SLC46A3Q7Z3Q1 461 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 SPATA19Q7Z5L4 167 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 HMGN2P46Q86SG4 172 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 GSPT2Q8IYD1 628 aaKnown RBP3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 CLECL1Q8IZS7 167 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 C4orf33Q8N1A6 199 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 ARFGAP2Q8N6H7 521 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 ZIC4Q8N9L1 334 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 POMGNT2Q8NAT1 580 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 FNDC5Q8NAU1 212 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 ZNF540Q8NDQ6 660 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 MIPOL1Q8TD10 442 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 UBLCP1Q8WVY7 318 aaPredicted RBP3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 XAGE5Q8WWM1 108 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 OIT3Q8WWZ8 545 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 CNOT9Q92600 299 aaKnown RBP3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 PMM1Q92871 262 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 RAB8BQ92930 207 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 TMEM45BQ96B21 275 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 ROPN1LQ96C74 230 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 TUBGCP3Q96CW5 907 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 DDIT4LQ96D03 193 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 ZG16BQ96DA0 208 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 AURKBQ96GD4 344 aaPredicted RBP3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 BOD1Q96IK1 185 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 SLC35G5Q96KT7 338 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 SLC38A2Q96QD8 506 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 VRK1Q99986 396 aaPredicted RBP3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 RHOXF2Q9BQY4 288 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 NAA11Q9BSU3 229 aaPredicted RBP3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 SOX7Q9BT81 388 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 MECRQ9BV79 373 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 BPESC1Q9GZL8 116 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 OR51I1Q9H343 314 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 PPCSQ9HAB8 311 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 MYOZ1Q9NP98 299 aaPredicted RBP3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 OBP2BQ9NPH6 170 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 EXOSC3Q9NQT5 275 aaKnown RBP3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 POLE3Q9NRF9 147 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 CA10Q9NS85 328 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 H2AFY2Q9P0M6 372 aaPredicted RBP3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 OSGIN1Q9UJX0 560 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 PCDHGB4Q9UN71 923 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 TMED7Q9Y3B3 224 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 WDR45Q9Y484 360 aa3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.16□□□□□ -1.98e-7■■■■■ 49.7
LPCAT3-212ENST00000545459 NUP214P35658 2090 aaPredicted RBP3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 HEATR1Q9H583 2144 aaKnown RBP3.16□□□□□ -1.9
LPCAT3-212ENST00000545459 CUBNO60494 3623 aa3.15□□□□□ -1.9
LPCAT3-212ENST00000545459 ARFGEF3Q5TH69 2177 aa3.15□□□□□ -1.9
LPCAT3-212ENST00000545459 ARPC4-TTLL3A0A0A6YYG9 625 aa3.15□□□□□ -1.91
LPCAT3-212ENST00000545459 IGHV1-18A0A0C4DH31 117 aa3.15□□□□□ -1.91
LPCAT3-212ENST00000545459 PRSS51A0A1B0GVH4 220 aa3.15□□□□□ -1.91
LPCAT3-212ENST00000545459 LRP5LA4QPB2 252 aa3.15□□□□□ -1.91
LPCAT3-212ENST00000545459 CFAP73A6NFT4 308 aa3.15□□□□□ -1.91
LPCAT3-212ENST00000545459 AGAP5A6NIR3 686 aa3.15□□□□□ -1.91
LPCAT3-212ENST00000545459 LIPT2A6NK58 231 aa3.15□□□□□ -1.91
LPCAT3-212ENST00000545459 AQP7P3A6NL99 342 aa3.15□□□□□ -1.91
LPCAT3-212ENST00000545459 CLDN24A6NM45 220 aa3.15□□□□□ -1.91
LPCAT3-212ENST00000545459 ZNF587BE7ETH6 402 aa3.15□□□□□ -1.91
LPCAT3-212ENST00000545459 HMGN4O00479 90 aa3.15□□□□□ -1.91
LPCAT3-212ENST00000545459 NR5A2O00482 541 aa3.15□□□□□ -1.91
LPCAT3-212ENST00000545459 FAAHO00519 579 aa3.15□□□□□ -1.91
LPCAT3-212ENST00000545459 RNASET2O00584 256 aaKnown RBP3.15□□□□□ -1.91
LPCAT3-212ENST00000545459 AP3D1O14617 1153 aa3.15□□□□□ -1.91
LPCAT3-212ENST00000545459 TCF21O43680 179 aa3.15□□□□□ -1.91
LPCAT3-212ENST00000545459 SCN2BO60939 215 aa3.15□□□□□ -1.91
LPCAT3-212ENST00000545459 SKAP2O75563 359 aaPredicted RBP3.15□□□□□ -1.91
LPCAT3-212ENST00000545459 KRT33AO76009 404 aa3.15□□□□□ -1.91
LPCAT3-212ENST00000545459 PDE5AO76074 875 aa3.15□□□□□ -1.91
LPCAT3-212ENST00000545459 SNUPNO95149 360 aaKnown RBP3.15□□□□□ -1.91
LPCAT3-212ENST00000545459 AKR7A3O95154 331 aa3.15□□□□□ -1.91
LPCAT3-212ENST00000545459 STAMBPO95630 424 aa3.15□□□□□ -1.91
LPCAT3-212ENST00000545459 CPSF4O95639 269 aaKnown RBP3.15□□□□□ -1.91
LPCAT3-212ENST00000545459 LGI1O95970 557 aa3.15□□□□□ -1.91
LPCAT3-212ENST00000545459 CRYAAP02489 173 aa3.15□□□□□ -1.91
LPCAT3-212ENST00000545459 GPIP06744 558 aa3.15□□□□□ -1.91
LPCAT3-212ENST00000545459 TACSTD2P09758 323 aa3.15□□□□□ -1.91
LPCAT3-212ENST00000545459 OR4A8P0C604 315 aa3.15□□□□□ -1.91
LPCAT3-212ENST00000545459 DAOP14920 347 aa3.15□□□□□ -1.91
LPCAT3-212ENST00000545459 UQCRBP14927 111 aa3.15□□□□□ -1.91
LPCAT3-212ENST00000545459 ITGA2P17301 1181 aa3.15□□□□□ -1.91
LPCAT3-212ENST00000545459 UQCRC2P22695 453 aa3.15□□□□□ -1.91
LPCAT3-212ENST00000545459 PAX7P23759 505 aa3.15□□□□□ -1.91
LPCAT3-212ENST00000545459 GIFP27352 417 aa3.15□□□□□ -1.91
LPCAT3-212ENST00000545459 TACR3P29371 465 aa3.15□□□□□ -1.91
LPCAT3-212ENST00000545459 IL2RGP31785 369 aa3.15□□□□□ -1.91
LPCAT3-212ENST00000545459 ARRB2P32121 409 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 172.2 ms