RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 GTF2E2P29084 291 aaKnown RBP6.53□□□□□ -1.36
CPSF7-224ENST00000544990 PCGF2P35227 344 aa6.53□□□□□ -1.36
CPSF7-224ENST00000544990 OR3A2P47893 321 aa6.53□□□□□ -1.36
CPSF7-224ENST00000544990 SLC16A1P53985 500 aa6.53□□□□□ -1.36
CPSF7-224ENST00000544990 RPL11P62913 178 aaKnown RBP6.53□□□□□ -1.36
CPSF7-224ENST00000544990 H3F3AP84243 136 aa6.53□□□□□ -1.36
CPSF7-224ENST00000544990 HOXC5Q00444 222 aa6.53□□□□□ -1.36
CPSF7-224ENST00000544990 BNIP2Q12982 314 aa6.53□□□□□ -1.36
CPSF7-224ENST00000544990 ITGADQ13349 1161 aa6.53□□□□□ -1.36
CPSF7-224ENST00000544990 CEACAM7Q14002 265 aa6.53□□□□□ -1.36
CPSF7-224ENST00000544990 SELPLGQ14242 412 aa6.53□□□□□ -1.36
CPSF7-224ENST00000544990 OR7A5Q15622 319 aa6.53□□□□□ -1.36
CPSF7-224ENST00000544990 VMACQ2NL98 169 aa6.53□□□□□ -1.36
CPSF7-224ENST00000544990 ALG10BQ5I7T1 473 aa6.53□□□□□ -1.36
CPSF7-224ENST00000544990 OTUD3Q5T2D3 398 aaPredicted RBP6.53□□□□□ -1.36
CPSF7-224ENST00000544990 C1orf140Q5VVS0 124 aa6.53□□□□□ -1.36
CPSF7-224ENST00000544990 FAM91A1Q658Y4 838 aa6.53□□□□□ -1.36
CPSF7-224ENST00000544990 REP15Q6BDI9 236 aa6.53□□□□□ -1.36
CPSF7-224ENST00000544990 TMEM225Q6GV28 225 aa6.53□□□□□ -1.36
CPSF7-224ENST00000544990 ABLIM2Q6H8Q1 611 aa6.53□□□□□ -1.36
CPSF7-224ENST00000544990 ERICH5Q6P6B1 374 aa6.53□□□□□ -1.36
CPSF7-224ENST00000544990 ULK3Q6PHR2 472 aa6.53□□□□□ -1.36
CPSF7-224ENST00000544990 C5orf46Q6UWT4 87 aa6.53□□□□□ -1.36
CPSF7-224ENST00000544990 Q6ZT83 130 aa6.53□□□□□ -1.36
CPSF7-224ENST00000544990 NET1Q7Z628 596 aaPredicted RBP6.53□□□□□ -1.36
CPSF7-224ENST00000544990 CPLX4Q7Z7G2 160 aa6.53□□□□□ -1.36
CPSF7-224ENST00000544990 ATG4DQ86TL0 474 aaPredicted RBP6.53□□□□□ -1.36
CPSF7-224ENST00000544990 RANBP3LQ86VV4 465 aaPredicted RBP6.53□□□□□ -1.36
CPSF7-224ENST00000544990 SNX32Q86XE0 403 aa6.53□□□□□ -1.36
CPSF7-224ENST00000544990 PTOV1Q86YD1 416 aa6.53□□□□□ -1.36
CPSF7-224ENST00000544990 CCDC103Q8IW40 242 aa6.53□□□□□ -1.36
CPSF7-224ENST00000544990 SMYD1Q8NB12 490 aa6.53□□□□□ -1.36
CPSF7-224ENST00000544990 APH1AQ96BI3 265 aa6.53□□□□□ -1.36
CPSF7-224ENST00000544990 SLC47A1Q96FL8 570 aa6.53□□□□□ -1.36
CPSF7-224ENST00000544990 ZC3HAV1LQ96H79 300 aaKnown RBP6.53□□□□□ -1.36
CPSF7-224ENST00000544990 ZNF300Q96RE9 604 aaPredicted RBP6.53□□□□□ -1.36
CPSF7-224ENST00000544990 ELAC2Q9BQ52 826 aaKnown RBP6.53□□□□□ -1.36
CPSF7-224ENST00000544990 SF3B5Q9BWJ5 86 aaKnown RBP6.53□□□□□ -1.36
CPSF7-224ENST00000544990 ACTR6Q9GZN1 396 aa6.53□□□□□ -1.36
CPSF7-224ENST00000544990 NGBQ9NPG2 151 aa6.53□□□□□ -1.36
CPSF7-224ENST00000544990 ADPRHL2Q9NX46 363 aa6.53□□□□□ -1.36
CPSF7-224ENST00000544990 TMEFF2Q9UIK5 374 aaPredicted RBP6.53□□□□□ -1.36
CPSF7-224ENST00000544990 ING1Q9UK53 422 aaPredicted RBP6.53□□□□□ -1.36
CPSF7-224ENST00000544990 AP3M1Q9Y2T2 418 aa6.53□□□□□ -1.36
CPSF7-224ENST00000544990 ANKHD1Q8IWZ3 2542 aaKnown RBP6.53□□□□□ -1.36
CPSF7-224ENST00000544990 TEP1Q99973 2627 aaKnown RBP6.53□□□□□ -1.36
CPSF7-224ENST00000544990 A0A1B0GWA3 101 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 AQP7P3A6NL99 342 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 ZNF716A6NP11 495 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 GCM2O75603 506 aaPredicted RBP6.52□□□□□ -1.37
CPSF7-224ENST00000544990 DNAJC8O75937 253 aaPredicted RBP6.52□□□□□ -1.37
CPSF7-224ENST00000544990 AKR7A3O95154 331 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 LGI1O95970 557 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 IFNA14P01570 189 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 OPN1SWP03999 348 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 HRGP04196 525 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 COX4I1P13073 169 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 KLK2P20151 261 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 DNASE1P24855 282 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 CCKARP32238 428 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 DMTNQ08495 405 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 VEZF1Q14119 521 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 SLC17A1Q14916 467 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 MFSD13AQ14CX5 517 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 OR1Q1Q15612 314 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 DUSP7Q16829 419 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 GLIPR1L2Q4G1C9 344 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 BEX5Q5H9J7 111 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 RABL3Q5HYI8 236 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 FBXW9Q5XUX1 488 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 C6orf89Q6UWU4 347 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 CCDC80Q76M96 950 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 SSX8Q7RTT4 187 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 SPATA21Q7Z572 469 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 ARPINQ7Z6K5 226 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 CXorf67Q86X51 503 aaPredicted RBP6.52□□□□□ -1.37
CPSF7-224ENST00000544990 GABRG1Q8N1C3 465 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 UBE2J2Q8N2K1 259 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 TMEM99Q8N816 258 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 MFSD8Q8NHS3 518 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 HSD17B8Q92506 261 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 SLC38A4Q969I6 547 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 SLC25A36Q96CQ1 311 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 PIK3IP1Q96FE7 263 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 MAP6Q96JE9 813 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 ALPK1Q96QP1 1244 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 EPYCQ99645 322 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 MCHR1Q99705 422 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 EFCAB1Q9HAE3 211 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 ERVK13-1Q9NX77 482 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 C6orf203Q9P0P8 240 aaPredicted RBP6.52□□□□□ -1.37
CPSF7-224ENST00000544990 ARMCX1Q9P291 453 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 UPB1Q9UBR1 384 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 PRSS50Q9UI38 385 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 ST6GALNAC2Q9UJ37 374 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 SLC9A8Q9Y2E8 581 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 ADGRG4Q8IZF6 3080 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 ABCA12Q86UK0 2595 aa6.52□□□□□ -1.37
CPSF7-224ENST00000544990 APCP25054 2843 aa6.51□□□□□ -1.37
CPSF7-224ENST00000544990 A0A087WUJ7 227 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms