RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 C16orf97H3BN30 126 aa16.91■□□□□ 0.3
DDX55-211ENST00000544429 HPRP00739 348 aa16.91■□□□□ 0.3
DDX55-211ENST00000544429 TSPAN19P0C672 248 aa16.91■□□□□ 0.3
DDX55-211ENST00000544429 COX5AP20674 150 aa16.91■□□□□ 0.3
DDX55-211ENST00000544429 ATP6V1B2P21281 511 aa16.91■□□□□ 0.3
DDX55-211ENST00000544429 YAP1P46937 504 aaKnown RBP16.91■□□□□ 0.3
DDX55-211ENST00000544429 MS4A2Q01362 244 aa16.91■□□□□ 0.3
DDX55-211ENST00000544429 P2RY6Q15077 328 aa16.91■□□□□ 0.3
DDX55-211ENST00000544429 PGM2L1Q6PCE3 622 aa16.91■□□□□ 0.3
DDX55-211ENST00000544429 PIK3C3Q8NEB9 887 aa16.91■□□□□ 0.3
DDX55-211ENST00000544429 APH1AQ96BI3 265 aa16.91■□□□□ 0.3
DDX55-211ENST00000544429 DHRS1Q96LJ7 313 aa16.91■□□□□ 0.3
DDX55-211ENST00000544429 DACH2Q96NX9 599 aa16.91■□□□□ 0.3
DDX55-211ENST00000544429 ANKRD19PQ9H560 264 aa16.91■□□□□ 0.3
DDX55-211ENST00000544429 PARPBPQ9NWS1 579 aa16.91■□□□□ 0.3
DDX55-211ENST00000544429 ZNF229Q9UJW7 825 aa16.91■□□□□ 0.3
DDX55-211ENST00000544429 HTR3EA5X5Y0 456 aa16.9■□□□□ 0.3
DDX55-211ENST00000544429 PDLIM1O00151 329 aa16.9■□□□□ 0.3
DDX55-211ENST00000544429 PLPP3O14495 311 aa16.9■□□□□ 0.3
DDX55-211ENST00000544429 ACOT8O14734 319 aa16.9■□□□□ 0.3
DDX55-211ENST00000544429 TRAF3IP2O43734 574 aaPredicted RBP16.9■□□□□ 0.3
DDX55-211ENST00000544429 MRPL33O75394 65 aaKnown RBP16.9■□□□□ 0.3
DDX55-211ENST00000544429 PDE5AO76074 875 aa16.9■□□□□ 0.3
DDX55-211ENST00000544429 EPXP11678 715 aa16.9■□□□□ 0.3
DDX55-211ENST00000544429 RHCEP18577 417 aa16.9■□□□□ 0.3
DDX55-211ENST00000544429 CBLP22681 906 aa16.9■□□□□ 0.3
DDX55-211ENST00000544429 GTF2E2P29084 291 aaKnown RBP16.9■□□□□ 0.3
DDX55-211ENST00000544429 LSM11P83369 360 aaKnown RBP eCLIP16.9■□□□□ 0.3
DDX55-211ENST00000544429 DAZAP2Q15038 168 aaPredicted RBP16.9■□□□□ 0.3
DDX55-211ENST00000544429 EXOC3L2Q2M3D2 409 aa16.9■□□□□ 0.3
DDX55-211ENST00000544429 DNAL1Q4LDG9 190 aa16.9■□□□□ 0.3
DDX55-211ENST00000544429 MTX3Q5HYI7 312 aa16.9■□□□□ 0.3
DDX55-211ENST00000544429 FBXW9Q5XUX1 488 aa16.9■□□□□ 0.3
DDX55-211ENST00000544429 C22orf34Q6ZV56 151 aa16.9■□□□□ 0.3
DDX55-211ENST00000544429 GPAT4Q86UL3 456 aa16.9■□□□□ 0.3
DDX55-211ENST00000544429 KDM8Q8N371 416 aa16.9■□□□□ 0.3
DDX55-211ENST00000544429 OR5J2Q8NH18 312 aa16.9■□□□□ 0.3
DDX55-211ENST00000544429 PFN4Q8NHR9 129 aa16.9■□□□□ 0.3
DDX55-211ENST00000544429 LINC01560Q8TB33 94 aa16.9■□□□□ 0.3
DDX55-211ENST00000544429 ASB9Q96DX5 294 aa16.9■□□□□ 0.3
DDX55-211ENST00000544429 CLPTM1LQ96KA5 538 aa16.9■□□□□ 0.3
DDX55-211ENST00000544429 BTBD10Q9BSF8 475 aa16.9■□□□□ 0.3
DDX55-211ENST00000544429 ASPNQ9BXN1 380 aa16.9■□□□□ 0.3
DDX55-211ENST00000544429 KLHL4Q9C0H6 718 aa16.9■□□□□ 0.3
DDX55-211ENST00000544429 NMNAT1Q9HAN9 279 aaPredicted RBP16.9■□□□□ 0.3
DDX55-211ENST00000544429 C20orf141Q9NUB4 165 aa16.9■□□□□ 0.3
DDX55-211ENST00000544429 GPR52Q9Y2T5 361 aa16.9■□□□□ 0.3
DDX55-211ENST00000544429 ABCA4P78363 2273 aa16.9■□□□□ 0.3
DDX55-211ENST00000544429 A0A1W2PRQ8 180 aa16.89■□□□□ 0.29
DDX55-211ENST00000544429 SH3D21A4FU49 640 aa16.89■□□□□ 0.29
DDX55-211ENST00000544429 ENO4A6NNW6 628 aa16.89■□□□□ 0.29
DDX55-211ENST00000544429 ZNF432O94892 652 aa16.89■□□□□ 0.29
DDX55-211ENST00000544429 CH25HO95992 272 aa16.89■□□□□ 0.29
DDX55-211ENST00000544429 PUDPQ08623 228 aa16.89■□□□□ 0.29
DDX55-211ENST00000544429 ZP4Q12836 540 aa16.89■□□□□ 0.29
DDX55-211ENST00000544429 ITGADQ13349 1161 aa16.89■□□□□ 0.29
DDX55-211ENST00000544429 DGCR6Q14129 220 aa16.89■□□□□ 0.29
DDX55-211ENST00000544429 TRAM2Q15035 370 aa16.89■□□□□ 0.29
DDX55-211ENST00000544429 SFRP5Q5T4F7 317 aa16.89■□□□□ 0.29
DDX55-211ENST00000544429 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.89■□□□□ 0.29
DDX55-211ENST00000544429 CXorf67Q86X51 503 aaPredicted RBP16.89■□□□□ 0.29
DDX55-211ENST00000544429 ZNF100Q8IYN0 542 aa16.89■□□□□ 0.29
DDX55-211ENST00000544429 LRRC17Q8N6Y2 441 aa16.89■□□□□ 0.29
DDX55-211ENST00000544429 WFIKKN1Q96NZ8 548 aa16.89■□□□□ 0.29
DDX55-211ENST00000544429 FUZQ9BT04 418 aa16.89■□□□□ 0.29
DDX55-211ENST00000544429 THTPAQ9BU02 230 aa16.89■□□□□ 0.29
DDX55-211ENST00000544429 FNDC11Q9BVV2 318 aa16.89■□□□□ 0.29
DDX55-211ENST00000544429 HDHD5Q9BXW7 423 aa16.89■□□□□ 0.29
DDX55-211ENST00000544429 IL1RAPQ9NPH3 570 aa16.89■□□□□ 0.29
DDX55-211ENST00000544429 NANSQ9NR45 359 aa16.89■□□□□ 0.29
DDX55-211ENST00000544429 TAS2R5Q9NYW4 299 aa16.89■□□□□ 0.29
DDX55-211ENST00000544429 RHCGQ9UBD6 479 aa16.89■□□□□ 0.29
DDX55-211ENST00000544429 RCE1Q9Y256 329 aa16.89■□□□□ 0.29
DDX55-211ENST00000544429 MED31Q9Y3C7 131 aa16.89■□□□□ 0.29
DDX55-211ENST00000544429 HRNRQ86YZ3 2850 aaPredicted RBP16.88■□□□□ 0.29
DDX55-211ENST00000544429 A0A087WUU8 490 aa16.88■□□□□ 0.29
DDX55-211ENST00000544429 KPNA4O00629 521 aaPredicted RBP16.88■□□□□ 0.29
DDX55-211ENST00000544429 GYG2O15488 501 aa16.88■□□□□ 0.29
DDX55-211ENST00000544429 ADAP00813 363 aa16.88■□□□□ 0.29
DDX55-211ENST00000544429 IGHV1-2P23083 117 aa16.88■□□□□ 0.29
DDX55-211ENST00000544429 SSTR2P30874 369 aa16.88■□□□□ 0.29
DDX55-211ENST00000544429 IFNA8P32881 189 aa16.88■□□□□ 0.29
DDX55-211ENST00000544429 PMS2P3Q13401 168 aa16.88■□□□□ 0.29
DDX55-211ENST00000544429 TSPO2Q5TGU0 170 aa16.88■□□□□ 0.29
DDX55-211ENST00000544429 CASP12Q6UXS9 341 aa16.88■□□□□ 0.29
DDX55-211ENST00000544429 CYP2R1Q6VVX0 501 aa16.88■□□□□ 0.29
DDX55-211ENST00000544429 AAED1Q7RTV5 226 aa16.88■□□□□ 0.29
DDX55-211ENST00000544429 PXKQ7Z7A4 578 aa16.88■□□□□ 0.29
DDX55-211ENST00000544429 DHFR2Q86XF0 187 aa16.88■□□□□ 0.29
DDX55-211ENST00000544429 RNF113BQ8IZP6 322 aaKnown RBP16.88■□□□□ 0.29
DDX55-211ENST00000544429 ACOT11Q8WXI4 607 aaPredicted RBP16.88■□□□□ 0.29
DDX55-211ENST00000544429 SLC7A10Q9NS82 523 aa16.88■□□□□ 0.29
DDX55-211ENST00000544429 hCG_2039718K7EN88 272 aa16.87■□□□□ 0.29
DDX55-211ENST00000544429 OR7A10O76100 309 aa16.87■□□□□ 0.29
DDX55-211ENST00000544429 GOSR1O95249 250 aa16.87■□□□□ 0.29
DDX55-211ENST00000544429 THBDP07204 575 aa16.87■□□□□ 0.29
DDX55-211ENST00000544429 HLA-DOBP13765 273 aa16.87■□□□□ 0.29
DDX55-211ENST00000544429 PPP3CBP16298 524 aa16.87■□□□□ 0.29
DDX55-211ENST00000544429 ZNF43P17038 809 aa16.87■□□□□ 0.29
DDX55-211ENST00000544429 MAGEA2P43356 314 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms