RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 GP6Q9HCN6 339 aa12.13□□□□□ -0.47
SP140-213ENST00000543928 VNN3Q9NY84 501 aa12.13□□□□□ -0.47
SP140-213ENST00000543928 EMC3Q9P0I2 261 aa12.13□□□□□ -0.47
SP140-213ENST00000543928 ZNF629Q9UEG4 869 aaPredicted RBP12.13□□□□□ -0.47
SP140-213ENST00000543928 ZNF229Q9UJW7 825 aa12.13□□□□□ -0.47
SP140-213ENST00000543928 TMCC3Q9ULS5 477 aa12.13□□□□□ -0.47
SP140-213ENST00000543928 EMC9Q9Y3B6 208 aa12.13□□□□□ -0.47
SP140-213ENST00000543928 LYVE1Q9Y5Y7 322 aa12.13□□□□□ -0.47
SP140-213ENST00000543928 DOPEY1Q5JWR5 2465 aa12.13□□□□□ -0.47
SP140-213ENST00000543928 IGKV3D-15A0A087WSY6 115 aa12.12□□□□□ -0.47
SP140-213ENST00000543928 HTR3EA5X5Y0 456 aa12.12□□□□□ -0.47
SP140-213ENST00000543928 FAM90A27PA6NNH2 459 aa12.12□□□□□ -0.47
SP140-213ENST00000543928 ZNF724A8MTY0 619 aa12.12□□□□□ -0.47
SP140-213ENST00000543928 GNGT2O14610 69 aa12.12□□□□□ -0.47
SP140-213ENST00000543928 TIPRLO75663 272 aa12.12□□□□□ -0.47
SP140-213ENST00000543928 VAMP5O95183 116 aa12.12□□□□□ -0.47
SP140-213ENST00000543928 HIST1H2ABP04908 130 aa12.12□□□□□ -0.47
SP140-213ENST00000543928 YES1P07947 543 aa12.12□□□□□ -0.47
SP140-213ENST00000543928 ASAH2BP0C7U1 165 aa12.12□□□□□ -0.47
SP140-213ENST00000543928 MAKP20794 623 aa12.12□□□□□ -0.47
SP140-213ENST00000543928 LIMS1P48059 325 aa12.12□□□□□ -0.47
SP140-213ENST00000543928 HMGA2P52926 109 aa12.12□□□□□ -0.47
SP140-213ENST00000543928 PPP1R8Q12972 351 aaKnown RBP12.12□□□□□ -0.47
SP140-213ENST00000543928 SLC17A1Q14916 467 aa12.12□□□□□ -0.47
SP140-213ENST00000543928 EEF1A1P5Q5VTE0 462 aa12.12□□□□□ -0.47
SP140-213ENST00000543928 VWA1Q6PCB0 445 aa12.12□□□□□ -0.47
SP140-213ENST00000543928 HIST3H2AQ7L7L0 130 aa12.12□□□□□ -0.47
SP140-213ENST00000543928 NANOGNBQ7Z5D8 188 aa12.12□□□□□ -0.47
SP140-213ENST00000543928 BTLAQ7Z6A9 289 aa12.12□□□□□ -0.47
SP140-213ENST00000543928 CDK20Q8IZL9 346 aa12.12□□□□□ -0.47
SP140-213ENST00000543928 RELL2Q8NC24 303 aaPredicted RBP12.12□□□□□ -0.47
SP140-213ENST00000543928 OR4C15Q8NGM1 316 aa12.12□□□□□ -0.47
SP140-213ENST00000543928 LILRB4Q8NHJ6 448 aa12.12□□□□□ -0.47
SP140-213ENST00000543928 LIPHQ8WWY8 451 aa12.12□□□□□ -0.47
SP140-213ENST00000543928 HIST1H2ACQ93077 130 aa12.12□□□□□ -0.47
SP140-213ENST00000543928 STARD4Q96DR4 205 aa12.12□□□□□ -0.47
SP140-213ENST00000543928 DUS3LQ96G46 650 aaKnown RBP12.12□□□□□ -0.47
SP140-213ENST00000543928 TACO1Q9BSH4 297 aaKnown RBP12.12□□□□□ -0.47
SP140-213ENST00000543928 SF3B5Q9BWJ5 86 aaKnown RBP12.12□□□□□ -0.47
SP140-213ENST00000543928 DENND2DQ9H6A0 471 aaPredicted RBP12.12□□□□□ -0.47
SP140-213ENST00000543928 RASD1Q9Y272 281 aa12.12□□□□□ -0.47
SP140-213ENST00000543928 SAMHD1Q9Y3Z3 626 aaKnown RBP12.12□□□□□ -0.47
SP140-213ENST00000543928 U3KQV3 271 aa12.12□□□□□ -0.47
SP140-213ENST00000543928 EFCAB9A8MZ26 197 aa12.11□□□□□ -0.47
SP140-213ENST00000543928 ANKRD65E5RJM6 399 aa12.11□□□□□ -0.47
SP140-213ENST00000543928 MS4A18H0YCH9 400 aa12.11□□□□□ -0.47
SP140-213ENST00000543928 PLPP3O14495 311 aa12.11□□□□□ -0.47
SP140-213ENST00000543928 GPR171O14626 319 aa12.11□□□□□ -0.47
SP140-213ENST00000543928 OR10H3O60404 316 aa12.11□□□□□ -0.47
SP140-213ENST00000543928 OR6A2O95222 327 aa12.11□□□□□ -0.47
SP140-213ENST00000543928 HPRP00739 348 aa12.11□□□□□ -0.47
SP140-213ENST00000543928 ADORA3P0DMS8 318 aa12.11□□□□□ -0.47
SP140-213ENST00000543928 SAGP10523 405 aaPredicted RBP12.11□□□□□ -0.47
SP140-213ENST00000543928 GPR4P46093 362 aa12.11□□□□□ -0.47
SP140-213ENST00000543928 IL1RL1Q01638 556 aa12.11□□□□□ -0.47
SP140-213ENST00000543928 PUDPQ08623 228 aa12.11□□□□□ -0.47
SP140-213ENST00000543928 MS4A18Q3C1V0 323 aa12.11□□□□□ -0.47
SP140-213ENST00000543928 SLC25A35Q3KQZ1 300 aa12.11□□□□□ -0.47
SP140-213ENST00000543928 TMPRSS11FQ6ZWK6 438 aa12.11□□□□□ -0.47
SP140-213ENST00000543928 NUFIP2Q7Z417 695 aaKnown RBP12.11□□□□□ -0.47
SP140-213ENST00000543928 GALNT5Q7Z7M9 940 aa12.11□□□□□ -0.47
SP140-213ENST00000543928 OR9K2Q8NGE7 335 aa12.11□□□□□ -0.47
SP140-213ENST00000543928 OR6K3Q8NGY3 331 aa12.11□□□□□ -0.47
SP140-213ENST00000543928 FAM46AQ96IP4 442 aaKnown RBP12.11□□□□□ -0.47
SP140-213ENST00000543928 OXGR1Q96P68 337 aa12.11□□□□□ -0.47
SP140-213ENST00000543928 UCK2Q9BZX2 261 aa12.11□□□□□ -0.47
SP140-213ENST00000543928 C12orf49Q9H741 205 aa12.11□□□□□ -0.47
SP140-213ENST00000543928 KRCC1Q9NPI7 259 aaPredicted RBP12.11□□□□□ -0.47
SP140-213ENST00000543928 ARMC1Q9NVT9 282 aa12.11□□□□□ -0.47
SP140-213ENST00000543928 B3GAT1Q9P2W7 334 aa12.11□□□□□ -0.47
SP140-213ENST00000543928 PROCRQ9UNN8 238 aa12.11□□□□□ -0.47
SP140-213ENST00000543928 TMEM5Q9Y2B1 443 aa12.11□□□□□ -0.47
SP140-213ENST00000543928 AP4S1Q9Y587 144 aa12.11□□□□□ -0.47
SP140-213ENST00000543928 FLVCR1Q9Y5Y0 555 aa12.11□□□□□ -0.47
SP140-213ENST00000543928 NKX2-6A6NCS4 301 aa12.1□□□□□ -0.47
SP140-213ENST00000543928 EEF1E1-BLOC1S5C9J1V9 151 aa12.1□□□□□ -0.47
SP140-213ENST00000543928 BLOC1S5-TXNDC5H3BN57 136 aa12.1□□□□□ -0.47
SP140-213ENST00000543928 EEF1E1O43324 174 aaKnown RBP12.1□□□□□ -0.47
SP140-213ENST00000543928 SMNDC1O75940 238 aaKnown RBP eCLIP12.1□□□□□ -0.47
SP140-213ENST00000543928 CLDN14O95500 239 aa12.1□□□□□ -0.47
SP140-213ENST00000543928 CGAP01215 116 aa12.1□□□□□ -0.47
SP140-213ENST00000543928 ZNF43P17038 809 aa12.1□□□□□ -0.47
SP140-213ENST00000543928 AHCYP23526 432 aa12.1□□□□□ -0.47
SP140-213ENST00000543928 OMPP47874 163 aa12.1□□□□□ -0.47
SP140-213ENST00000543928 IST1P53990 364 aa12.1□□□□□ -0.47
SP140-213ENST00000543928 C1DQ13901 141 aaKnown RBP12.1□□□□□ -0.47
SP140-213ENST00000543928 LAPTM4AQ15012 233 aa12.1□□□□□ -0.47
SP140-213ENST00000543928 POU4F3Q15319 338 aa12.1□□□□□ -0.47
SP140-213ENST00000543928 CREB3L2Q70SY1 520 aa12.1□□□□□ -0.47
SP140-213ENST00000543928 EPHX4Q8IUS5 362 aa12.1□□□□□ -0.47
SP140-213ENST00000543928 ZIC4Q8N9L1 334 aa12.1□□□□□ -0.47
SP140-213ENST00000543928 PYDC1Q8WXC3 89 aa12.1□□□□□ -0.47
SP140-213ENST00000543928 ZNF385AQ96PM9 386 aaKnown RBP12.1□□□□□ -0.47
SP140-213ENST00000543928 PIGMQ9H3S5 423 aa12.1□□□□□ -0.47
SP140-213ENST00000543928 KCNJ16Q9NPI9 418 aa12.1□□□□□ -0.47
SP140-213ENST00000543928 TAS2R5Q9NYW4 299 aa12.1□□□□□ -0.47
SP140-213ENST00000543928 DNAJB9Q9UBS3 223 aa12.1□□□□□ -0.47
SP140-213ENST00000543928 NOSIPQ9Y314 301 aaKnown RBP12.1□□□□□ -0.47
SP140-213ENST00000543928 CACNA1CQ13936 2221 aa12.1□□□□□ -0.47
SP140-213ENST00000543928 TRAV27A0A087WT01 109 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms