RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 ZNF726A6NNF4 738 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 ZNF724A8MTY0 619 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 ZNF814B7Z6K7 855 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 MCIDASD6RGH6 385 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 FTCDNL1E5RQL4 147 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 HNRNPRO43390 633 aaKnown RBP5.62□□□□□ -1.51
LTBR-212ENST00000543542 RAMP1O60894 148 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 TIPRLO75663 272 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 CCNB2O95067 398 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 PRSS23O95084 383 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 RPL4P36578 427 aaKnown RBP5.62□□□□□ -1.51
LTBR-212ENST00000543542 KIR2DL2P43627 348 aaPredicted RBP5.62□□□□□ -1.51
LTBR-212ENST00000543542 ASCL1P50553 236 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 CLDN17P56750 224 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 POU3F1Q03052 451 aaPredicted RBP5.62□□□□□ -1.51
LTBR-212ENST00000543542 PRKCDQ05655 676 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 LTBQ06643 244 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 SRSF1Q07955 248 aaKnown RBP eCLIP5.62□□□□□ -1.51
LTBR-212ENST00000543542 PUDPQ08623 228 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 PPP1R8Q12972 351 aaKnown RBP5.62□□□□□ -1.51
LTBR-212ENST00000543542 CCNIQ14094 377 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 DGCR6Q14129 220 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 KPNB1Q14974 876 aaKnown RBP5.62□□□□□ -1.51
LTBR-212ENST00000543542 PDK3Q15120 406 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 ABLIM2Q6H8Q1 611 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 NIPAL3Q6P499 406 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 BEND4Q6ZU67 534 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 ZNF771Q7L3S4 317 aaPredicted RBP5.62□□□□□ -1.51
LTBR-212ENST00000543542 NUFIP2Q7Z417 695 aaKnown RBP5.62□□□□□ -1.51
LTBR-212ENST00000543542 BTLAQ7Z6A9 289 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 OAFQ86UD1 273 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 LIX1LQ8IVB5 337 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 LINC00471Q8N535 108 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 LRRC17Q8N6Y2 441 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 ZNF610Q8N9Z0 462 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 OR4K5Q8NGD3 323 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 OR9K2Q8NGE7 335 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 OR51A7Q8NH64 312 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 SLC7A13Q8TCU3 470 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 GNPDA2Q8TDQ7 276 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 STMN2Q93045 179 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 APH1AQ96BI3 265 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 STARD4Q96DR4 205 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 ZNF426Q9BUY5 554 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 SF3B5Q9BWJ5 86 aaKnown RBP5.62□□□□□ -1.51
LTBR-212ENST00000543542 RBM24Q9BX46 236 aaKnown RBP5.62□□□□□ -1.51
LTBR-212ENST00000543542 BCO1Q9HAY6 547 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 MCCC2Q9HCC0 563 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 GP6Q9HCN6 339 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 MEPEQ9NQ76 525 aaPredicted RBP5.62□□□□□ -1.51
LTBR-212ENST00000543542 MAN2C1Q9NTJ4 1040 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 CCM2LQ9NUG4 571 aaPredicted RBP5.62□□□□□ -1.51
LTBR-212ENST00000543542 MRPL39Q9NYK5 338 aaKnown RBP5.62□□□□□ -1.51
LTBR-212ENST00000543542 KIF17Q9P2E2 1029 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 AP4S1Q9Y587 144 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 MED12LQ86YW9 2145 aa5.62□□□□□ -1.51
LTBR-212ENST00000543542 TRAV27A0A087WT01 109 aa5.61□□□□□ -1.51
LTBR-212ENST00000543542 SH3PXD2BA1X283 911 aa5.61□□□□□ -1.51
LTBR-212ENST00000543542 UNC119BA6NIH7 251 aa5.61□□□□□ -1.51
LTBR-212ENST00000543542 ZNF716A6NP11 495 aa5.61□□□□□ -1.51
LTBR-212ENST00000543542 ANKRD65E5RJM6 399 aa5.61□□□□□ -1.51
LTBR-212ENST00000543542 MS4A18H0YCH9 400 aa5.61□□□□□ -1.51
LTBR-212ENST00000543542 PLPP3O14495 311 aa5.61□□□□□ -1.51
LTBR-212ENST00000543542 MSTNO14793 375 aa5.61□□□□□ -1.51
LTBR-212ENST00000543542 CLOCKO15516 846 aa5.61□□□□□ -1.51
LTBR-212ENST00000543542 SLC43A1O75387 559 aa5.61□□□□□ -1.51
LTBR-212ENST00000543542 DEAF1O75398 565 aaPredicted RBP5.61□□□□□ -1.51
LTBR-212ENST00000543542 TNFSF13O75888 250 aa5.61□□□□□ -1.51
LTBR-212ENST00000543542 UBR5O95071 2799 aaPredicted RBP5.61□□□□□ -1.51
LTBR-212ENST00000543542 IGF2P01344 180 aa5.61□□□□□ -1.51
LTBR-212ENST00000543542 IGHV3-9P01782 118 aa5.61□□□□□ -1.51
LTBR-212ENST00000543542 F13BP05160 661 aa5.61□□□□□ -1.51
LTBR-212ENST00000543542 CD8BP10966 210 aa5.61□□□□□ -1.51
LTBR-212ENST00000543542 FCGR1AP12314 374 aa5.61□□□□□ -1.51
LTBR-212ENST00000543542 POU2F1P14859 743 aa5.61□□□□□ -1.51
LTBR-212ENST00000543542 MAKP20794 623 aa5.61□□□□□ -1.51
LTBR-212ENST00000543542 FUT4P22083 530 aa5.61□□□□□ -1.51
LTBR-212ENST00000543542 FASP25445 335 aa5.61□□□□□ -1.51
LTBR-212ENST00000543542 AQP2P41181 271 aa5.61□□□□□ -1.51
LTBR-212ENST00000543542 MAGEA2P43356 314 aa5.61□□□□□ -1.51
LTBR-212ENST00000543542 SLC9A3P48764 834 aa5.61□□□□□ -1.51
LTBR-212ENST00000543542 SLC16A1P53985 500 aa5.61□□□□□ -1.51
LTBR-212ENST00000543542 H3F3AP84243 136 aa5.61□□□□□ -1.51
LTBR-212ENST00000543542 RPL18Q07020 188 aaKnown RBP5.61□□□□□ -1.51
LTBR-212ENST00000543542 TOP3AQ13472 1001 aaPredicted RBP5.61□□□□□ -1.51
LTBR-212ENST00000543542 SLC17A1Q14916 467 aa5.61□□□□□ -1.51
LTBR-212ENST00000543542 LAPTM4AQ15012 233 aa5.61□□□□□ -1.51
LTBR-212ENST00000543542 SEC23BQ15437 767 aa5.61□□□□□ -1.51
LTBR-212ENST00000543542 MS4A18Q3C1V0 323 aa5.61□□□□□ -1.51
LTBR-212ENST00000543542 ALG10Q5BKT4 473 aa5.61□□□□□ -1.51
LTBR-212ENST00000543542 CARD17Q5XLA6 110 aa5.61□□□□□ -1.51
LTBR-212ENST00000543542 MYO7BQ6PIF6 2116 aa5.61□□□□□ -1.51
LTBR-212ENST00000543542 CREB3L2Q70SY1 520 aa5.61□□□□□ -1.51
LTBR-212ENST00000543542 SLC46A3Q7Z3Q1 461 aa5.61□□□□□ -1.51
LTBR-212ENST00000543542 ABHD12BQ7Z5M8 362 aaPredicted RBP5.61□□□□□ -1.51
LTBR-212ENST00000543542 TSEN54Q7Z6J9 526 aaKnown RBP5.61□□□□□ -1.51
LTBR-212ENST00000543542 IGFN1Q86VF2 1251 aa5.61□□□□□ -1.51
LTBR-212ENST00000543542 GPR137CQ8N3F9 429 aa5.61□□□□□ -1.51
LTBR-212ENST00000543542 RELL2Q8NC24 303 aaPredicted RBP5.61□□□□□ -1.51
LTBR-212ENST00000543542 ADPRHL1Q8NDY3 354 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms