RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 F13BP05160 661 aa12.84□□□□□ -0.35
LDB3-207ENST00000542786 SPNP16150 400 aa12.84□□□□□ -0.35
LDB3-207ENST00000542786 ZNF28P17035 718 aa12.84□□□□□ -0.35
LDB3-207ENST00000542786 CXCR1P25024 350 aa12.84□□□□□ -0.35
LDB3-207ENST00000542786 ITPKBP27987 946 aa12.84□□□□□ -0.35
LDB3-207ENST00000542786 PYCR1P32322 319 aa12.84□□□□□ -0.35
LDB3-207ENST00000542786 MTNR1BP49286 362 aa12.84□□□□□ -0.35
LDB3-207ENST00000542786 IL11RAQ14626 422 aa12.84□□□□□ -0.35
LDB3-207ENST00000542786 COL28A1Q2UY09 1125 aa12.84□□□□□ -0.35
LDB3-207ENST00000542786 TP53I3Q53FA7 332 aa12.84□□□□□ -0.35
LDB3-207ENST00000542786 TRIM61Q5EBN2 209 aa12.84□□□□□ -0.35
LDB3-207ENST00000542786 ZMAT1Q5H9K5 638 aa12.84□□□□□ -0.35
LDB3-207ENST00000542786 AGAP7PQ5VUJ5 663 aa12.84□□□□□ -0.35
LDB3-207ENST00000542786 GRINAQ7Z429 371 aa12.84□□□□□ -0.35
LDB3-207ENST00000542786 MISPQ8IVT2 679 aa12.84□□□□□ -0.35
LDB3-207ENST00000542786 DRAXINQ8NBI3 349 aaPredicted RBP12.84□□□□□ -0.35
LDB3-207ENST00000542786 DUSP19Q8WTR2 217 aa12.84□□□□□ -0.35
LDB3-207ENST00000542786 SNRNP27Q8WVK2 155 aaKnown RBP12.84□□□□□ -0.35
LDB3-207ENST00000542786 METTL21AQ8WXB1 218 aa12.84□□□□□ -0.35
LDB3-207ENST00000542786 CTRCQ99895 268 aa12.84□□□□□ -0.35
LDB3-207ENST00000542786 NEURL2Q9BR09 285 aa12.84□□□□□ -0.35
LDB3-207ENST00000542786 TAS2R10Q9NYW0 307 aa12.84□□□□□ -0.35
LDB3-207ENST00000542786 TMED7Q9Y3B3 224 aa12.84□□□□□ -0.35
LDB3-207ENST00000542786 DCTN6O00399 190 aa12.83□□□□□ -0.36
LDB3-207ENST00000542786 CASKO14936 926 aa12.83□□□□□ -0.36
LDB3-207ENST00000542786 RGS5O15539 181 aa12.83□□□□□ -0.36
LDB3-207ENST00000542786 NCR1O76036 304 aa12.83□□□□□ -0.36
LDB3-207ENST00000542786 PTTG1O95997 202 aa12.83□□□□□ -0.36
LDB3-207ENST00000542786 MT-ATP6P00846 226 aa12.83□□□□□ -0.36
LDB3-207ENST00000542786 CD1AP06126 327 aa12.83□□□□□ -0.36
LDB3-207ENST00000542786 NAGAP17050 411 aa12.83□□□□□ -0.36
LDB3-207ENST00000542786 NRG3P56975 720 aa12.83□□□□□ -0.36
LDB3-207ENST00000542786 ACTA2P62736 377 aa12.83□□□□□ -0.36
LDB3-207ENST00000542786 ACTG2P63267 376 aa12.83□□□□□ -0.36
LDB3-207ENST00000542786 TRA2AQ13595 282 aaKnown RBP eCLIP12.83□□□□□ -0.36
LDB3-207ENST00000542786 KRR1Q13601 381 aaKnown RBP12.83□□□□□ -0.36
LDB3-207ENST00000542786 TRAM1Q15629 374 aa12.83□□□□□ -0.36
LDB3-207ENST00000542786 GPR139Q6DWJ6 353 aa12.83□□□□□ -0.36
LDB3-207ENST00000542786 CPAMD8Q8IZJ3 1885 aa12.83□□□□□ -0.36
LDB3-207ENST00000542786 ABHD4Q8TB40 342 aa12.83□□□□□ -0.36
LDB3-207ENST00000542786 NECAB3Q96P71 396 aaPredicted RBP12.83□□□□□ -0.36
LDB3-207ENST00000542786 TSSK2Q96PF2 358 aa12.83□□□□□ -0.36
LDB3-207ENST00000542786 NPAS1Q99742 590 aa12.83□□□□□ -0.36
LDB3-207ENST00000542786 CRB3Q9BUF7 120 aa12.83□□□□□ -0.36
LDB3-207ENST00000542786 ALG12Q9BV10 488 aa12.83□□□□□ -0.36
LDB3-207ENST00000542786 WDR54Q9H977 334 aa12.83□□□□□ -0.36
LDB3-207ENST00000542786 FBXO4Q9UKT5 387 aa12.83□□□□□ -0.36
LDB3-207ENST00000542786 ZNF346Q9UL40 294 aaKnown RBP12.83□□□□□ -0.36
LDB3-207ENST00000542786 TBC1D24Q9ULP9 559 aa12.83□□□□□ -0.36
LDB3-207ENST00000542786 B3GALT1Q9Y5Z6 326 aa12.83□□□□□ -0.36
LDB3-207ENST00000542786 ZDBF2Q9HCK1 2354 aa12.83□□□□□ -0.36
LDB3-207ENST00000542786 A0A0G2JK05 382 aa12.82□□□□□ -0.36
LDB3-207ENST00000542786 ANKUB1A6NFN9 424 aa12.82□□□□□ -0.36
LDB3-207ENST00000542786 ETV2O00321 342 aaPredicted RBP12.82□□□□□ -0.36
LDB3-207ENST00000542786 DXOO77932 396 aaKnown RBP12.82□□□□□ -0.36
LDB3-207ENST00000542786 F8A1P23610 371 aa12.82□□□□□ -0.36
LDB3-207ENST00000542786 PTGDSP41222 190 aa12.82□□□□□ -0.36
LDB3-207ENST00000542786 RPS11P62280 158 aaKnown RBP eCLIP12.82□□□□□ -0.36
LDB3-207ENST00000542786 DAB2P98082 770 aa12.82□□□□□ -0.36
LDB3-207ENST00000542786 HSF2Q03933 536 aa12.82□□□□□ -0.36
LDB3-207ENST00000542786 CDK5R1Q15078 307 aa12.82□□□□□ -0.36
LDB3-207ENST00000542786 SGCBQ16585 318 aa12.82□□□□□ -0.36
LDB3-207ENST00000542786 FAM27D1Q5T7N8 215 aa12.82□□□□□ -0.36
LDB3-207ENST00000542786 DDI2Q5TDH0 399 aa12.82□□□□□ -0.36
LDB3-207ENST00000542786 FAM198BQ6UWH4 519 aa12.82□□□□□ -0.36
LDB3-207ENST00000542786 TIGD4Q8IY51 512 aa12.82□□□□□ -0.36
LDB3-207ENST00000542786 TEX19Q8NA77 164 aa12.82□□□□□ -0.36
LDB3-207ENST00000542786 DTWD2Q8NBA8 298 aa12.82□□□□□ -0.36
LDB3-207ENST00000542786 STK35Q8TDR2 534 aa12.82□□□□□ -0.36
LDB3-207ENST00000542786 AP3S1Q92572 193 aa12.82□□□□□ -0.36
LDB3-207ENST00000542786 C8orf44Q96CB5 159 aa12.82□□□□□ -0.36
LDB3-207ENST00000542786 TMCO6Q96DC7 493 aa12.82□□□□□ -0.36
LDB3-207ENST00000542786 TTTY10Q9BZA0 68 aa12.82□□□□□ -0.36
LDB3-207ENST00000542786 KCNN2Q9H2S1 579 aa12.82□□□□□ -0.36
LDB3-207ENST00000542786 RPRD1BQ9NQG5 326 aaKnown RBP12.82□□□□□ -0.36
LDB3-207ENST00000542786 KLHDC2Q9Y2U9 406 aa12.82□□□□□ -0.36
LDB3-207ENST00000542786 LOC102723996A0A087X1L8 192 aa12.82□□□□□ -0.36
LDB3-207ENST00000542786 A8MVM7 634 aa12.82□□□□□ -0.36
LDB3-207ENST00000542786 FTCDNL1E5RQL4 147 aa12.82□□□□□ -0.36
LDB3-207ENST00000542786 CPNE3O75131 537 aaKnown RBP12.82□□□□□ -0.36
LDB3-207ENST00000542786 PRKCAP17252 672 aa12.82□□□□□ -0.36
LDB3-207ENST00000542786 THBS2P35442 1172 aa12.82□□□□□ -0.36
LDB3-207ENST00000542786 DUSP3P51452 185 aaPredicted RBP12.82□□□□□ -0.36
LDB3-207ENST00000542786 SUMO3P55854 103 aaPredicted RBP12.82□□□□□ -0.36
LDB3-207ENST00000542786 SLC3A1Q07837 685 aa12.82□□□□□ -0.36
LDB3-207ENST00000542786 FAM69AQ5T7M9 428 aa12.82□□□□□ -0.36
LDB3-207ENST00000542786 C1orf140Q5VVS0 124 aa12.82□□□□□ -0.36
LDB3-207ENST00000542786 GDPD3Q7L5L3 318 aa12.82□□□□□ -0.36
LDB3-207ENST00000542786 MAMDC2Q7Z304 686 aaPredicted RBP12.82□□□□□ -0.36
LDB3-207ENST00000542786 JAZF1Q86VZ6 243 aa12.82□□□□□ -0.36
LDB3-207ENST00000542786 CADM3Q8N126 398 aa12.82□□□□□ -0.36
LDB3-207ENST00000542786 POC5Q8NA72 575 aa12.82□□□□□ -0.36
LDB3-207ENST00000542786 ZNF511Q8NB15 262 aa12.82□□□□□ -0.36
LDB3-207ENST00000542786 ZNF519Q8TB69 540 aa12.82□□□□□ -0.36
LDB3-207ENST00000542786 THAP3Q8WTV1 239 aaPredicted RBP12.82□□□□□ -0.36
LDB3-207ENST00000542786 TTC9Q92623 222 aa12.82□□□□□ -0.36
LDB3-207ENST00000542786 GHSRQ92847 366 aa12.82□□□□□ -0.36
LDB3-207ENST00000542786 PMEPA1Q969W9 287 aa12.82□□□□□ -0.36
LDB3-207ENST00000542786 CPNE5Q9HCH3 593 aa12.82□□□□□ -0.36
LDB3-207ENST00000542786 RXFP3Q9NSD7 469 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms