RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 SLC11A1P49279 550 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 SRP9P49458 86 aaKnown RBP2.73□□□□□ -1.97
USP28-210ENST00000542033 RGS6P49758 472 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 HLCSP50747 726 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 CRYBB1P53674 252 aaPredicted RBP2.73□□□□□ -1.97
USP28-210ENST00000542033 PRMT2P55345 433 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 ACTR3P61158 418 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 COPZ1P61923 177 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 ESRRGP62508 458 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 PUDPQ08623 228 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 IL24Q13007 206 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 EIF4EBP2Q13542 120 aaPredicted RBP2.73□□□□□ -1.97
USP28-210ENST00000542033 EXOSC7Q15024 291 aaKnown RBP2.73□□□□□ -1.97
USP28-210ENST00000542033 PDK2Q15119 407 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 PDK3Q15120 406 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 ZNHIT3Q15649 155 aaPredicted RBP2.73□□□□□ -1.97
USP28-210ENST00000542033 TAB1Q15750 504 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 HSD17B12Q53GQ0 312 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 AGKQ53H12 422 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 DNLZQ5SXM8 178 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 PDZK1Q5T2W1 519 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 ATP1A1-AS1Q5TC04 95 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 PRAMEF20Q5VT98 475 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 C1orf189Q5VU69 101 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 GPR107Q5VW38 600 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 RTL6Q6ICC9 239 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 OR5M10Q6IEU7 315 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 ANKRD26P1Q6NSI1 321 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 RPL13AP3Q6NVV1 102 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 ZNF544Q6NX49 715 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 CDC42EP5Q6NZY7 148 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 ZNF613Q6PF04 617 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 TFAP2EQ6VUC0 442 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 FAM92BQ6ZTR7 304 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 SLC22A16Q86VW1 577 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 CCDC71Q8IV32 467 aaPredicted RBP2.73□□□□□ -1.97
USP28-210ENST00000542033 GPR65Q8IYL9 337 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 MCOLN2Q8IZK6 566 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 SPAG16Q8N0X2 631 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 ZCCHC7Q8N3Z6 543 aaKnown RBP2.73□□□□□ -1.97
USP28-210ENST00000542033 TCEANCQ8N8B7 351 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 FADS6Q8N9I5 356 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 TMEM104Q8NE00 496 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 OR2D3Q8NGH3 330 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 OR52H1Q8NGJ2 320 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 OR2L8Q8NGY9 312 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 OR4L1Q8NH43 312 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 OR10J5Q8NHC4 309 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 CD99L2Q8TCZ2 262 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 CD300LFQ8TDQ1 290 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 MITD1Q8WV92 249 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 ING5Q8WYH8 240 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 MAFIPQ8WZ33 124 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 PHYHIPQ92561 330 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 ISG20Q96AZ6 181 aaKnown RBP2.73□□□□□ -1.97
USP28-210ENST00000542033 PINX1Q96BK5 328 aaKnown RBP2.73□□□□□ -1.97
USP28-210ENST00000542033 CXorf58Q96LI9 332 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 PPP1R36Q96LQ0 422 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 FOPNLQ96NB1 174 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 WFIKKN1Q96NZ8 548 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 CASD1Q96PB1 797 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 CYP2S1Q96SQ9 504 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 VGLL1Q99990 258 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 APOL2Q9BQE5 337 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 PDCD10Q9BUL8 212 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 WRAP53Q9BUR4 548 aaKnown RBP2.73□□□□□ -1.97
USP28-210ENST00000542033 MND1Q9BWT6 205 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 BBS2Q9BXC9 721 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 OR52A5Q9H2C5 316 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 ARMC7Q9H6L4 198 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 RANBP3Q9H6Z4 567 aaPredicted RBP2.73□□□□□ -1.97
USP28-210ENST00000542033 B3GAT2Q9NPZ5 323 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 NANSQ9NR45 359 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 ABCC13Q9NSE7 274 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 RBAKQ9NYW8 714 aaPredicted RBP2.73□□□□□ -1.97
USP28-210ENST00000542033 GTSE1Q9NYZ3 720 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 TREM2Q9NZC2 230 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 CTSFQ9UBX1 484 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 WARS2Q9UGM6 360 aaKnown RBP2.73□□□□□ -1.97
USP28-210ENST00000542033 CLEC2DQ9UHP7 191 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 MGAT4AQ9UM21 535 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 DHRS7Q9Y394 339 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 OR1A2Q9Y585 309 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 SPACA6W5XKT8 324 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 MYH13Q9UKX3 1938 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 DUOX2Q9NRD8 1548 aa2.73□□□□□ -1.97
USP28-210ENST00000542033 WNK3Q9BYP7 1800 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 MYH11P35749 1972 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 ABCC4O15439 1325 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 ZMYM6O95789 1325 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 CFTRP13569 1480 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 PZPP20742 1482 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 TARBP1Q13395 1621 aaKnown RBP2.72□□□□□ -1.97
USP28-210ENST00000542033 CC2D2AQ9P2K1 1620 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 MYH8P13535 1937 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 KIAA1217Q5T5P2 1943 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 A0A075B6Q4 140 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 A0A0A6YYH2 397 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 C9orf170A2RU37 121 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 TRIM49BA6NDI0 452 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms