RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 ERI2A8K979 691 aaKnown RBP3.39□□□□□ -1.87
SNHG1-217ENST00000541578 FAM25EA8MYX2 175 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 E9PLD3 99 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 G3V3Y1 287 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 FOXE1O00358 373 aaPredicted RBP3.39□□□□□ -1.87
SNHG1-217ENST00000541578 TAPBPO15533 448 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 RS1O15537 224 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 EFNA2O43921 213 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 SRPX2O60687 465 aaPredicted RBP3.39□□□□□ -1.87
SNHG1-217ENST00000541578 KRT14P02533 472 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 ASGR1P07306 291 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 ANXA8P13928 327 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 MMP11P24347 488 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 PTBP1P26599 531 aaKnown RBP eCLIP3.39□□□□□ -1.873e-55■■□□□ 13.5
SNHG1-217ENST00000541578 CCR1P32246 355 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 HMGCLP35914 325 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 BTDP43251 543 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 RPL34P49207 117 aaKnown RBP3.39□□□□□ -1.87
SNHG1-217ENST00000541578 SH3BGRP55822 239 aaPredicted RBP3.39□□□□□ -1.87
SNHG1-217ENST00000541578 MS4A2Q01362 244 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 TGM3Q08188 693 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 CUL1Q13616 776 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 LAGE3Q14657 143 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 PPP1R3AQ16821 1122 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 PCK2Q16822 640 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 DMRTC1Q5HYR2 192 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 SPANXN2Q5MJ10 180 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 ANXA8L1Q5VT79 327 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 RNASEKQ6P5S7 137 aaKnown RBP3.39□□□□□ -1.87
SNHG1-217ENST00000541578 CDR2LQ86X02 465 aaPredicted RBP3.39□□□□□ -1.87
SNHG1-217ENST00000541578 PHC2Q8IXK0 858 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 SLC22A18ASQ8N1D0 253 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 PDCL2Q8N4E4 241 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 C4orf32Q8N8J7 132 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 ZNF491Q8N8L2 437 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 TRPV1Q8NER1 839 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 OR4Q3Q8NH05 313 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 RAB3IL1Q8TBN0 382 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 SSC4DQ8WTU2 575 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 ARNTL2Q8WYA1 636 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 MRPS31Q92665 395 aaKnown RBP3.39□□□□□ -1.87
SNHG1-217ENST00000541578 TMEM80Q96HE8 168 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 ZNF599Q96NL3 588 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 CITED1Q99966 193 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 MTG1Q9BT17 334 aaPredicted RBP3.39□□□□□ -1.87
SNHG1-217ENST00000541578 DPH7Q9BTV6 452 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 HCAR1Q9BXC0 346 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 RAB34Q9BZG1 259 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 PPDPFQ9H3Y8 114 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 UBE2ZQ9H832 354 aaPredicted RBP3.39□□□□□ -1.87
SNHG1-217ENST00000541578 HEXA-AS1Q9H8Q6 139 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 PNO1Q9NRX1 252 aaKnown RBP3.39□□□□□ -1.87
SNHG1-217ENST00000541578 DDX18Q9NVP1 670 aaKnown RBP3.39□□□□□ -1.87
SNHG1-217ENST00000541578 QPCTLQ9NXS2 382 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 CA5BQ9Y2D0 317 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 AK6Q9Y3D8 172 aaKnown RBP3.39□□□□□ -1.87
SNHG1-217ENST00000541578 Q9Y3F1 56 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 BRWD1Q9NSI6 2320 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 COL11A1P12107 1806 aaPredicted RBP3.39□□□□□ -1.87
SNHG1-217ENST00000541578 ZNF236Q9UL36 1845 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 MROH7-TTC4A0A0A0MT08 1334 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 CACNA1BQ00975 2339 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 FAM186AA6NE01 2351 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 ZFHX2Q9C0A1 2572 aaPredicted RBP3.38□□□□□ -1.87
SNHG1-217ENST00000541578 C5orf42Q9H799 3197 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 PPIAL4EA0A075B759 164 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 UQCRHLA0A096LP55 91 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 IGHV2-70DA0A0C4DH43 119 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 IQANK1A0A1B0GTG1 560 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 A8MXQ7 604 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 C9JVG2 144 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 F8VZ95 297 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 HAS3O00219 553 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 NBR2O15453 112 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 CIAO1O76071 339 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 IGHV3-9P01782 118 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 UQCRHP07919 91 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 PPIAL4FP0DN26 164 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 CD1CP29017 333 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 NMT1P30419 496 aaKnown RBP3.38□□□□□ -1.87
SNHG1-217ENST00000541578 FGF9P31371 208 aaPredicted RBP3.38□□□□□ -1.87
SNHG1-217ENST00000541578 ELK3P41970 407 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 VLDLRP98155 873 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 SLC10A7Q0GE19 358 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 ST3GAL3Q11203 375 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 ELAVL2Q12926 359 aaKnown RBP3.38□□□□□ -1.87
SNHG1-217ENST00000541578 ZNF154Q13106 437 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 IL18Q14116 193 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 SLC25A52Q3SY17 297 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 C6orf226Q5I0X4 101 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 ZNF506Q5JVG8 444 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 FAM182AQ5T1J6 154 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 RAET1LQ5VY80 246 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 RFWD3Q6PCD5 774 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 SASS6Q6UVJ0 657 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 TMEM107Q6UX40 140 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 STAC2Q6ZMT1 411 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 H2BFWTQ7Z2G1 175 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 LINC01561Q8N1V8 128 aa3.38□□□□□ -1.87
SNHG1-217ENST00000541578 KIR3DL3Q8N743 410 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms