RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 V9GYQ6 96 aa16.69■□□□□ 0.26
VPS33A-205ENST00000541169 SPTBN1Q01082 2364 aaKnown RBP16.69■□□□□ 0.26
VPS33A-205ENST00000541169 DHRS12A0PJE2 317 aa16.68■□□□□ 0.26
VPS33A-205ENST00000541169 NKX2-6A6NCS4 301 aa16.68■□□□□ 0.26
VPS33A-205ENST00000541169 J3KTA2 159 aa16.68■□□□□ 0.26
VPS33A-205ENST00000541169 CIB2O75838 187 aa16.68■□□□□ 0.26
VPS33A-205ENST00000541169 GADD45GO95257 159 aa16.68■□□□□ 0.26
VPS33A-205ENST00000541169 CLDN1O95832 211 aa16.68■□□□□ 0.26
VPS33A-205ENST00000541169 CH25HO95992 272 aa16.68■□□□□ 0.26
VPS33A-205ENST00000541169 ASAH2BP0C7U1 165 aa16.68■□□□□ 0.26
VPS33A-205ENST00000541169 OR3A2P47893 321 aa16.68■□□□□ 0.26
VPS33A-205ENST00000541169 SLC9A3P48764 834 aa16.68■□□□□ 0.26
VPS33A-205ENST00000541169 PRKCDQ05655 676 aa16.68■□□□□ 0.26
VPS33A-205ENST00000541169 GABPB1Q06547 395 aaPredicted RBP16.68■□□□□ 0.26
VPS33A-205ENST00000541169 ZP4Q12836 540 aa16.68■□□□□ 0.26
VPS33A-205ENST00000541169 C1DQ13901 141 aaKnown RBP16.68■□□□□ 0.26
VPS33A-205ENST00000541169 P2RY6Q15077 328 aa16.68■□□□□ 0.26
VPS33A-205ENST00000541169 IQCCQ4KMZ1 466 aa16.68■□□□□ 0.26
VPS33A-205ENST00000541169 ABHD12BQ7Z5M8 362 aaPredicted RBP16.68■□□□□ 0.26
VPS33A-205ENST00000541169 TSEN54Q7Z6J9 526 aaKnown RBP16.68■□□□□ 0.26
VPS33A-205ENST00000541169 C10orf67Q8IYJ2 551 aa16.68■□□□□ 0.26
VPS33A-205ENST00000541169 APH1AQ96BI3 265 aa16.68■□□□□ 0.26
VPS33A-205ENST00000541169 DNAJA3Q96EY1 480 aa16.68■□□□□ 0.26
VPS33A-205ENST00000541169 MOGAT1Q96PD6 335 aa16.68■□□□□ 0.26
VPS33A-205ENST00000541169 SPOCK3Q9BQ16 436 aa16.68■□□□□ 0.26
VPS33A-205ENST00000541169 OR10A4Q9H209 315 aa16.68■□□□□ 0.26
VPS33A-205ENST00000541169 RHCGQ9UBD6 479 aa16.68■□□□□ 0.26
VPS33A-205ENST00000541169 TMCC3Q9ULS5 477 aa16.68■□□□□ 0.26
VPS33A-205ENST00000541169 CLEC4AQ9UMR7 237 aa16.68■□□□□ 0.26
VPS33A-205ENST00000541169 RCE1Q9Y256 329 aa16.68■□□□□ 0.26
VPS33A-205ENST00000541169 ENO4A6NNW6 628 aa16.67■□□□□ 0.26
VPS33A-205ENST00000541169 KPNA4O00629 521 aaPredicted RBP16.67■□□□□ 0.26
VPS33A-205ENST00000541169 PLPP3O14495 311 aa16.67■□□□□ 0.26
VPS33A-205ENST00000541169 OR7A10O76100 309 aa16.67■□□□□ 0.26
VPS33A-205ENST00000541169 HMGA2P52926 109 aa16.67■□□□□ 0.26
VPS33A-205ENST00000541169 UGT2B15P54855 530 aa16.67■□□□□ 0.26
VPS33A-205ENST00000541169 CDSNQ15517 529 aa16.67■□□□□ 0.26
VPS33A-205ENST00000541169 FGD3Q5JSP0 725 aa16.67■□□□□ 0.26
VPS33A-205ENST00000541169 C1QTNF12Q5T7M4 302 aa16.67■□□□□ 0.26
VPS33A-205ENST00000541169 Q6ZT83 130 aa16.67■□□□□ 0.26
VPS33A-205ENST00000541169 CREB3L2Q70SY1 520 aa16.67■□□□□ 0.26
VPS33A-205ENST00000541169 SSX8Q7RTT4 187 aa16.67■□□□□ 0.26
VPS33A-205ENST00000541169 HDDC2Q7Z4H3 204 aa16.67■□□□□ 0.26
VPS33A-205ENST00000541169 NANOGNBQ7Z5D8 188 aa16.67■□□□□ 0.26
VPS33A-205ENST00000541169 LUZP2Q86TE4 346 aa16.67■□□□□ 0.26
VPS33A-205ENST00000541169 SPATA24Q86W54 205 aa16.67■□□□□ 0.26
VPS33A-205ENST00000541169 P3H2Q8IVL5 708 aa16.67■□□□□ 0.26
VPS33A-205ENST00000541169 ANKK1Q8NFD2 765 aa16.67■□□□□ 0.26
VPS33A-205ENST00000541169 SLC7A13Q8TCU3 470 aa16.67■□□□□ 0.26
VPS33A-205ENST00000541169 ENKD1Q9H0I2 346 aa16.67■□□□□ 0.26
VPS33A-205ENST00000541169 CACNA1CQ13936 2221 aa16.67■□□□□ 0.26
VPS33A-205ENST00000541169 A0A087WUU8 490 aa16.66■□□□□ 0.26
VPS33A-205ENST00000541169 TCRBV3S1A0A5B6 114 aa16.66■□□□□ 0.26
VPS33A-205ENST00000541169 ZNF814B7Z6K7 855 aa16.66■□□□□ 0.26
VPS33A-205ENST00000541169 IFI30P13284 250 aa16.66■□□□□ 0.26
VPS33A-205ENST00000541169 PPP3CBP16298 524 aa16.66■□□□□ 0.26
VPS33A-205ENST00000541169 FUT1P19526 365 aa16.66■□□□□ 0.26
VPS33A-205ENST00000541169 CD79BP40259 229 aa16.66■□□□□ 0.26
VPS33A-205ENST00000541169 SPIBQ01892 262 aa16.66■□□□□ 0.26
VPS33A-205ENST00000541169 LTBQ06643 244 aa16.66■□□□□ 0.26
VPS33A-205ENST00000541169 C1orf146Q5VVC0 180 aa16.66■□□□□ 0.26
VPS33A-205ENST00000541169 TFAP2EQ6VUC0 442 aa16.66■□□□□ 0.26
VPS33A-205ENST00000541169 TMPRSS11FQ6ZWK6 438 aa16.66■□□□□ 0.26
VPS33A-205ENST00000541169 AAED1Q7RTV5 226 aa16.66■□□□□ 0.26
VPS33A-205ENST00000541169 UEVLDQ8IX04 471 aa16.66■□□□□ 0.26
VPS33A-205ENST00000541169 NRMQ8IXM6 262 aa16.66■□□□□ 0.26
VPS33A-205ENST00000541169 ZNF610Q8N9Z0 462 aa16.66■□□□□ 0.26
VPS33A-205ENST00000541169 POMGNT2Q8NAT1 580 aa16.66■□□□□ 0.26
VPS33A-205ENST00000541169 ACBD4Q8NC06 268 aa16.66■□□□□ 0.26
VPS33A-205ENST00000541169 STX18Q9P2W9 335 aaKnown RBP16.66■□□□□ 0.26
VPS33A-205ENST00000541169 HCFC1P51610 2035 aa16.65■□□□□ 0.26
VPS33A-205ENST00000541169 A1L4Q6 167 aa16.65■□□□□ 0.26
VPS33A-205ENST00000541169 MS4A18H0YCH9 400 aa16.65■□□□□ 0.26
VPS33A-205ENST00000541169 ADORA3P0DMS8 318 aa16.65■□□□□ 0.26
VPS33A-205ENST00000541169 POU2F1P14859 743 aa16.65■□□□□ 0.26
VPS33A-205ENST00000541169 IGFBP2P18065 325 aa16.65■□□□□ 0.26
VPS33A-205ENST00000541169 UQCRC1P31930 480 aa16.65■□□□□ 0.26
VPS33A-205ENST00000541169 PRPS1P60891 318 aa16.65■□□□□ 0.26
VPS33A-205ENST00000541169 IL1RL1Q01638 556 aa16.65■□□□□ 0.26
VPS33A-205ENST00000541169 MS4A18Q3C1V0 323 aa16.65■□□□□ 0.26
VPS33A-205ENST00000541169 FBXW9Q5XUX1 488 aa16.65■□□□□ 0.26
VPS33A-205ENST00000541169 OR2T5Q6IEZ7 315 aa16.65■□□□□ 0.26
VPS33A-205ENST00000541169 PODNL1Q6PEZ8 512 aa16.65■□□□□ 0.26
VPS33A-205ENST00000541169 NUFIP2Q7Z417 695 aaKnown RBP16.65■□□□□ 0.26
VPS33A-205ENST00000541169 ADGRG5Q8IZF4 528 aa16.65■□□□□ 0.26
VPS33A-205ENST00000541169 PIAS4Q8N2W9 510 aaPredicted RBP16.65■□□□□ 0.26
VPS33A-205ENST00000541169 OR2T29Q8NH02 315 aa16.65■□□□□ 0.26
VPS33A-205ENST00000541169 PFN4Q8NHR9 129 aa16.65■□□□□ 0.26
VPS33A-205ENST00000541169 ADAD1Q96M93 576 aaKnown RBP16.65■□□□□ 0.26
VPS33A-205ENST00000541169 RAB3IPQ96QF0 476 aaPredicted RBP16.65■□□□□ 0.26
VPS33A-205ENST00000541169 OPN3Q9H1Y3 402 aaPredicted RBP16.65■□□□□ 0.26
VPS33A-205ENST00000541169 C12orf49Q9H741 205 aa16.65■□□□□ 0.26
VPS33A-205ENST00000541169 GALNT8Q9NY28 637 aa16.65■□□□□ 0.26
VPS33A-205ENST00000541169 B3GAT1Q9P2W7 334 aa16.65■□□□□ 0.26
VPS33A-205ENST00000541169 NDRG3Q9UGV2 375 aa16.65■□□□□ 0.26
VPS33A-205ENST00000541169 AURKCQ9UQB9 309 aa16.65■□□□□ 0.26
VPS33A-205ENST00000541169 GPR52Q9Y2T5 361 aa16.65■□□□□ 0.26
VPS33A-205ENST00000541169 TESMINQ9Y4I5 508 aa16.65■□□□□ 0.26
VPS33A-205ENST00000541169 USP9YO00507 2555 aaPredicted RBP16.65■□□□□ 0.26
VPS33A-205ENST00000541169 SH3PXD2BA1X283 911 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms