RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 MOV10Q9HCE1 1003 aaKnown RBP6.31□□□□□ -1.4
YBX3-209ENST00000540747 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.31□□□□□ -1.4
YBX3-209ENST00000540747 EXD2Q9NVH0 621 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 TMEM45AQ9NWC5 275 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 MID2Q9UJV3 735 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 OR6C65A6NJZ3 312 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 B4DSR2 109 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 FAM157AC9JC47 383 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 FTCDNL1E5RQL4 147 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 ZNF587BE7ETH6 402 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 LYNX1G3V0Z9 82 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 HMGN4O00479 90 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 TM9SF1O15321 606 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 CFLARO15519 480 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 FRS3O43559 492 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 MGRN1O60291 552 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 EDF1O60869 148 aaKnown RBP6.3□□□□□ -1.4
YBX3-209ENST00000540747 UPK3AO75631 287 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 SNUPNO95149 360 aaKnown RBP6.3□□□□□ -1.4
YBX3-209ENST00000540747 AKR7A3O95154 331 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 ATP6V1G2O95670 118 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 GPIP06744 558 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 CHRM4P08173 479 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 LYNX1P0DP58 116 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 CBR1P16152 277 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 KRT4P19013 534 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 CCNA2P20248 432 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 NPR2P20594 1047 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 PCMT1P22061 227 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 UQCRC2P22695 453 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 ACAA2P42765 397 aaKnown RBP6.3□□□□□ -1.4
YBX3-209ENST00000540747 SH3BGRP55822 239 aaPredicted RBP6.3□□□□□ -1.4
YBX3-209ENST00000540747 HILS1P60008 231 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 NCALDP61601 193 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 TUBA1BP68363 451 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 TUBA4AP68366 448 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 EMX2Q04743 252 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 RIPK1Q13546 671 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 CEACAM7Q14002 265 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 TUSC1Q2TAM9 212 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 SMU1Q2TAY7 513 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 ELFN2Q5R3F8 820 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 UGT2A3Q6UWM9 527 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 RINLQ6ZS11 566 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 C1orf229Q6ZS94 237 aaPredicted RBP6.3□□□□□ -1.4
YBX3-209ENST00000540747 USP43Q70EL4 1123 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 CREB3L2Q70SY1 520 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 TUBA1AQ71U36 451 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 ABHD12BQ7Z5M8 362 aaPredicted RBP6.3□□□□□ -1.4
YBX3-209ENST00000540747 CDK20Q8IZL9 346 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 ANKFN1Q8N957 763 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 FNDC5Q8NAU1 212 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 SGMS2Q8NHU3 365 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 UBASH3BQ8TF42 649 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 FAM216AQ8WUB2 273 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 XAGE5Q8WWM1 108 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 ZNF75AQ96N20 296 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 TRNT1Q96Q11 434 aaKnown RBP6.3□□□□□ -1.4
YBX3-209ENST00000540747 MECRQ9BV79 373 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 ZDHHC2Q9UIJ5 367 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 METRNQ9UJH8 293 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 PCDHB14Q9Y5E9 798 aa6.3□□□□□ -1.4
YBX3-209ENST00000540747 DSPPQ9NZW4 1301 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 PRSS51A0A1B0GVH4 220 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 WDR91A4D1P6 747 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 CDHR4A6H8M9 788 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 VGLL3A8MV65 326 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 WNT9BO14905 357 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 TYROBPO43914 113 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 HNRNPCL1O60812 293 aaKnown RBP6.29□□□□□ -1.4
YBX3-209ENST00000540747 RP2O75695 350 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 VAMP5O95183 116 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 IFNGR1P15260 489 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 CDH2P19022 906 aaPredicted RBP6.29□□□□□ -1.4
YBX3-209ENST00000540747 SERPINB5P36952 375 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 EVX1P49640 407 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 UBE2NP61088 152 aaKnown RBP6.29□□□□□ -1.4
YBX3-209ENST00000540747 LMO4P61968 165 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 CCNIQ14094 377 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 OR7A5Q15622 319 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 ADRM1Q16186 407 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 SYPL1Q16563 259 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 GSTA3Q16772 222 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 PGS1Q32NB8 556 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 PRR31Q5SQ13 230 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 MRPL2Q5T653 305 aaKnown RBP6.29□□□□□ -1.4
YBX3-209ENST00000540747 ATAD3BQ5T9A4 648 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 VHLLQ6RSH7 139 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 LRRC74BQ6ZQY2 392 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 ZCCHC23Q6ZST2 131 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 GLCCI1Q86VQ1 547 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 CARM1Q86X55 608 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 FITM2Q8N6M3 262 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 OR4A15Q8NGL6 344 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 CLDND2Q8NHS1 167 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 AGR3Q8TD06 166 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 WDR60Q8WVS4 1066 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 TMEM186Q96B77 213 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 TESCQ96BS2 214 aa6.29□□□□□ -1.4
YBX3-209ENST00000540747 ZNF837Q96EG3 531 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms