RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 SNX22Q96L94 193 aa10.26□□□□□ -0.77
PBX1-212ENST00000540236 PAAF1Q9BRP4 392 aa10.26□□□□□ -0.77
PBX1-212ENST00000540236 A0A1B0GTQ1 180 aa10.26□□□□□ -0.77
PBX1-212ENST00000540236 ZNF736B4DX44 427 aaPredicted RBP10.26□□□□□ -0.77
PBX1-212ENST00000540236 TIA1P31483 386 aaKnown RBP eCLIP10.26□□□□□ -0.77
PBX1-212ENST00000540236 ARFRP1Q13795 201 aa10.26□□□□□ -0.77
PBX1-212ENST00000540236 ZNF385BQ569K4 471 aa10.26□□□□□ -0.77
PBX1-212ENST00000540236 TPRA1Q86W33 373 aa10.26□□□□□ -0.77
PBX1-212ENST00000540236 CHST13Q8NET6 341 aa10.26□□□□□ -0.77
PBX1-212ENST00000540236 FAM221BA6H8Z2 402 aa10.26□□□□□ -0.77
PBX1-212ENST00000540236 CTNSO60931 367 aa10.26□□□□□ -0.77
PBX1-212ENST00000540236 CCKBRP32239 447 aa10.26□□□□□ -0.77
PBX1-212ENST00000540236 SCAPQ12770 1279 aa10.26□□□□□ -0.77
PBX1-212ENST00000540236 HABP2Q14520 560 aaPredicted RBP10.26□□□□□ -0.77
PBX1-212ENST00000540236 ZNF239Q16600 458 aaKnown RBP10.26□□□□□ -0.77
PBX1-212ENST00000540236 OR52E4Q8NGH9 312 aa10.26□□□□□ -0.77
PBX1-212ENST00000540236 NECAB3Q96P71 396 aaPredicted RBP10.26□□□□□ -0.77
PBX1-212ENST00000540236 IL17FQ96PD4 163 aa10.26□□□□□ -0.77
PBX1-212ENST00000540236 APMAPQ9HDC9 416 aa10.26□□□□□ -0.77
PBX1-212ENST00000540236 NDOR1Q9UHB4 597 aa10.26□□□□□ -0.77
PBX1-212ENST00000540236 ZNF780BQ9Y6R6 833 aa10.26□□□□□ -0.77
PBX1-212ENST00000540236 WASH4PA8MWX3 477 aa10.26□□□□□ -0.77
PBX1-212ENST00000540236 SIAH2O43255 324 aa10.26□□□□□ -0.77
PBX1-212ENST00000540236 HEXAP06865 529 aa10.26□□□□□ -0.77
PBX1-212ENST00000540236 OR4E1P0C645 316 aa10.26□□□□□ -0.77
PBX1-212ENST00000540236 PIPP12273 146 aaPredicted RBP10.26□□□□□ -0.77
PBX1-212ENST00000540236 EIF5AP63241 154 aaKnown RBP10.26□□□□□ -0.77
PBX1-212ENST00000540236 COL13A1Q5TAT6 717 aaPredicted RBP10.26□□□□□ -0.77
PBX1-212ENST00000540236 MEPCEQ7L2J0 689 aaKnown RBP10.26□□□□□ -0.77
PBX1-212ENST00000540236 OR5AK2Q8NH90 309 aa10.26□□□□□ -0.77
PBX1-212ENST00000540236 DEFB129Q9H1M3 183 aa10.26□□□□□ -0.77
PBX1-212ENST00000540236 FTSJ1Q9UET6 329 aa10.26□□□□□ -0.77
PBX1-212ENST00000540236 C17orf113A0A1B0GUU1 675 aa10.26□□□□□ -0.77
PBX1-212ENST00000540236 A8MXK9 166 aa10.26□□□□□ -0.77
PBX1-212ENST00000540236 ONECUT3O60422 494 aaPredicted RBP10.26□□□□□ -0.77
PBX1-212ENST00000540236 AIFM1O95831 613 aa10.26□□□□□ -0.77
PBX1-212ENST00000540236 RPLP1P05386 114 aaKnown RBP10.26□□□□□ -0.77
PBX1-212ENST00000540236 LCTLQ6UWM7 567 aa10.26□□□□□ -0.77
PBX1-212ENST00000540236 TMEM173Q86WV6 379 aaPredicted RBP10.26□□□□□ -0.77
PBX1-212ENST00000540236 HCAR1Q9BXC0 346 aa10.26□□□□□ -0.77
PBX1-212ENST00000540236 P2RY12Q9H244 342 aa10.26□□□□□ -0.77
PBX1-212ENST00000540236 MSL2Q9HCI7 577 aa10.26□□□□□ -0.77
PBX1-212ENST00000540236 HMX1Q9NP08 348 aaPredicted RBP10.26□□□□□ -0.77
PBX1-212ENST00000540236 PARD6AQ9NPB6 346 aa10.26□□□□□ -0.77
PBX1-212ENST00000540236 MPTX1A8MV57 137 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 NPIPA2E9PIF3 369 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 MBTPS2O43462 519 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 FZD6O60353 706 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 ASGR2P07307 311 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 MUC1P15941 1255 aaPredicted RBP10.25□□□□□ -0.77
PBX1-212ENST00000540236 SLC2A5P22732 501 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 PTTG1IPP53801 180 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 GLO1Q04760 184 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 C2orf68Q2NKX9 166 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 ABCA11PQ4W5N1 156 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 REC114Q7Z4M0 266 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 CARFQ8N187 725 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 SLC38A5Q8WUX1 472 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 KIRREL1Q96J84 757 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 SRMSQ9H3Y6 488 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 TSPAN31Q12999 210 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 RAB11BQ15907 218 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 ZNF750Q32MQ0 723 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 AMZ1Q400G9 498 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 TIGD5Q53EQ6 642 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 HACD4Q5VWC8 232 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 CDPF1Q6NVV7 123 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 HSD17B11Q8NBQ5 300 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 RAB33BQ9H082 229 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 CYSLTR2Q9NS75 346 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 LAMP5Q9UJQ1 280 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 DOCK2Q92608 1830 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 POP4O95707 220 aaKnown RBP10.25□□□□□ -0.77
PBX1-212ENST00000540236 TMEM11P17152 192 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 ATF1P18846 271 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 SRMP19623 302 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 PAX6P26367 422 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 RGRP47804 291 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 NRG3P56975 720 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 TMPPEQ6ZT21 453 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 PLPPR4Q7Z2D5 763 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 RTN4RL1Q86UN2 441 aaPredicted RBP10.25□□□□□ -0.77
PBX1-212ENST00000540236 RANBP3LQ86VV4 465 aaPredicted RBP10.25□□□□□ -0.77
PBX1-212ENST00000540236 ZFP62Q8NB50 900 aaPredicted RBP10.25□□□□□ -0.77
PBX1-212ENST00000540236 NLGN2Q8NFZ4 835 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 PFN4Q8NHR9 129 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 K7ERQ8 282 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 SELENOFO60613 162 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 AK1P00568 194 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 SPCS3P61009 180 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 ZC3H14Q6PJT7 736 aaKnown RBP10.25□□□□□ -0.77
PBX1-212ENST00000540236 OR4C5Q8NGB2 326 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 OR5M8Q8NGP6 311 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 MISP3Q96FF7 219 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 MMP26Q9NRE1 261 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 GKN1Q9NS71 199 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 ZNF701Q9NV72 531 aaPredicted RBP10.25□□□□□ -0.77
PBX1-212ENST00000540236 POLR1DQ9Y2S0 133 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 FOCADQ5VW36 1801 aa10.25□□□□□ -0.77
PBX1-212ENST00000540236 PMS2P1A4D2B8 440 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms