RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 SERPINI2O75830 405 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 F13BP05160 661 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 UCHL1P09936 223 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 ABCD3P28288 659 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 MAP2K3P46734 347 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 CXCL12P48061 93 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 PLCXD2Q0VAA5 305 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 CEP78Q5JTW2 689 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 HLA-DQA1Q5Y7H0 255 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 PAMR1Q6UXH9 720 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 LANCL3Q6ZV70 420 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 UBE2J2Q8N2K1 259 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 C19orf18Q8NEA5 215 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 PLPP5Q8NEB5 264 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 OR4M2Q8NGB6 313 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 OMA1Q96E52 524 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 RNF31Q96EP0 1072 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 TSSK2Q96PF2 358 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 MFRPQ9BY79 579 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 ZCCHC4Q9H5U6 513 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 FKRPQ9H9S5 495 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 COPS7AQ9UBW8 275 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 NPFFR2Q9Y5X5 522 aa12.74□□□□□ -0.37
LIMK1-208ENST00000538333 TRBV2A0A0J9YWF9 115 aa12.73□□□□□ -0.37
LIMK1-208ENST00000538333 FAM171A2A8MVW0 826 aa12.73□□□□□ -0.37
LIMK1-208ENST00000538333 DCTN6O00399 190 aa12.73□□□□□ -0.37
LIMK1-208ENST00000538333 NDUFB5O43674 189 aa12.73□□□□□ -0.37
LIMK1-208ENST00000538333 EIF4E2O60573 245 aaKnown RBP12.73□□□□□ -0.37
LIMK1-208ENST00000538333 WISP1O95388 367 aa12.73□□□□□ -0.37
LIMK1-208ENST00000538333 RAB3BP20337 219 aa12.73□□□□□ -0.37
LIMK1-208ENST00000538333 NPR2P20594 1047 aa12.73□□□□□ -0.37
LIMK1-208ENST00000538333 PNLIPRP2P54317 469 aa12.73□□□□□ -0.37
LIMK1-208ENST00000538333 TMPRSS9Q7Z410 1059 aa12.73□□□□□ -0.37
LIMK1-208ENST00000538333 JAZF1Q86VZ6 243 aa12.73□□□□□ -0.37
LIMK1-208ENST00000538333 SAMD12Q8N8I0 201 aa12.73□□□□□ -0.37
LIMK1-208ENST00000538333 ZNF511Q8NB15 262 aa12.73□□□□□ -0.37
LIMK1-208ENST00000538333 OR4M1Q8NGD0 313 aa12.73□□□□□ -0.37
LIMK1-208ENST00000538333 TP53INP1Q96A56 240 aa12.73□□□□□ -0.37
LIMK1-208ENST00000538333 CCDC74AQ96AQ1 378 aa12.73□□□□□ -0.37
LIMK1-208ENST00000538333 TSPAN32Q96QS1 320 aa12.73□□□□□ -0.37
LIMK1-208ENST00000538333 ELF4Q99607 663 aaPredicted RBP12.73□□□□□ -0.37
LIMK1-208ENST00000538333 PDCD1LG2Q9BQ51 273 aa12.73□□□□□ -0.37
LIMK1-208ENST00000538333 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.73□□□□□ -0.37
LIMK1-208ENST00000538333 RNF121Q9H920 327 aa12.73□□□□□ -0.37
LIMK1-208ENST00000538333 RBFOX1Q9NWB1 397 aaKnown RBP12.73□□□□□ -0.37
LIMK1-208ENST00000538333 ZNF346Q9UL40 294 aaKnown RBP12.73□□□□□ -0.37
LIMK1-208ENST00000538333 MOKQ9UQ07 419 aa12.73□□□□□ -0.37
LIMK1-208ENST00000538333 A0A0C4DFX4 3053 aa12.73□□□□□ -0.37
LIMK1-208ENST00000538333 EXPH5Q8NEV8 1989 aa12.73□□□□□ -0.37
LIMK1-208ENST00000538333 OR6C76A6NM76 312 aa12.73□□□□□ -0.37
LIMK1-208ENST00000538333 ADAM10O14672 748 aa12.73□□□□□ -0.37
LIMK1-208ENST00000538333 GATBO75879 557 aaKnown RBP12.73□□□□□ -0.37
LIMK1-208ENST00000538333 PAHP00439 452 aa12.73□□□□□ -0.37
LIMK1-208ENST00000538333 BGLAPP02818 100 aa12.73□□□□□ -0.37
LIMK1-208ENST00000538333 DCNP07585 359 aaKnown RBP12.73□□□□□ -0.37
LIMK1-208ENST00000538333 EDNRAP25101 427 aa12.73□□□□□ -0.37
LIMK1-208ENST00000538333 RBMS1P29558 406 aaKnown RBP12.73□□□□□ -0.37
LIMK1-208ENST00000538333 PSMB10P40306 273 aa12.73□□□□□ -0.37
LIMK1-208ENST00000538333 MESTQ5EB52 335 aa12.73□□□□□ -0.37
LIMK1-208ENST00000538333 EMC4Q5J8M3 183 aa12.73□□□□□ -0.37
LIMK1-208ENST00000538333 UNQ9370/PRO34162Q6UXP9 181 aa12.73□□□□□ -0.37
LIMK1-208ENST00000538333 SLC29A4Q7RTT9 530 aa12.73□□□□□ -0.37
LIMK1-208ENST00000538333 NANOGNBQ7Z5D8 188 aa12.73□□□□□ -0.37
LIMK1-208ENST00000538333 DEFB123Q8N688 67 aa12.73□□□□□ -0.37
LIMK1-208ENST00000538333 SCAIQ8N9R8 606 aa12.73□□□□□ -0.37
LIMK1-208ENST00000538333 DUSP18Q8NEJ0 188 aa12.73□□□□□ -0.37
LIMK1-208ENST00000538333 MRPL48Q96GC5 212 aaKnown RBP12.73□□□□□ -0.37
LIMK1-208ENST00000538333 CDX2Q99626 313 aaPredicted RBP12.73□□□□□ -0.37
LIMK1-208ENST00000538333 A0A1W2PPK0 400 aa12.72□□□□□ -0.37
LIMK1-208ENST00000538333 IDSB3KWA1 339 aa12.72□□□□□ -0.37
LIMK1-208ENST00000538333 LYRM1O43325 122 aa12.72□□□□□ -0.37
LIMK1-208ENST00000538333 GMFGO60234 142 aa12.72□□□□□ -0.37
LIMK1-208ENST00000538333 CDC40O60508 579 aaKnown RBP eCLIP12.72□□□□□ -0.37
LIMK1-208ENST00000538333 CPNE3O75131 537 aaKnown RBP12.72□□□□□ -0.37
LIMK1-208ENST00000538333 TRAPPC2P0DI81 140 aa12.72□□□□□ -0.37
LIMK1-208ENST00000538333 TRAPPC2BP0DI82 140 aa12.72□□□□□ -0.37
LIMK1-208ENST00000538333 FOXL2P58012 376 aa12.72□□□□□ -0.37
LIMK1-208ENST00000538333 RHBDD2Q6NTF9 364 aa12.72□□□□□ -0.37
LIMK1-208ENST00000538333 ZNF574Q6ZN55 896 aaPredicted RBP12.72□□□□□ -0.37
LIMK1-208ENST00000538333 SLC16A9Q7RTY1 509 aa12.72□□□□□ -0.37
LIMK1-208ENST00000538333 SYT9Q86SS6 491 aa12.72□□□□□ -0.37
LIMK1-208ENST00000538333 TIGD4Q8IY51 512 aa12.72□□□□□ -0.37
LIMK1-208ENST00000538333 TRMT10AQ8TBZ6 339 aaKnown RBP12.72□□□□□ -0.37
LIMK1-208ENST00000538333 ENKURQ8TC29 256 aa12.72□□□□□ -0.37
LIMK1-208ENST00000538333 ST6GAL2Q96JF0 529 aa12.72□□□□□ -0.37
LIMK1-208ENST00000538333 GUCD1Q96NT3 240 aa12.72□□□□□ -0.37
LIMK1-208ENST00000538333 OR14A2Q96R54 314 aa12.72□□□□□ -0.37
LIMK1-208ENST00000538333 TBL1XR1Q9BZK7 514 aa12.72□□□□□ -0.37
LIMK1-208ENST00000538333 TGIF2Q9GZN2 237 aa12.72□□□□□ -0.37
LIMK1-208ENST00000538333 RXFP3Q9NSD7 469 aa12.72□□□□□ -0.37
LIMK1-208ENST00000538333 CPAMD8Q8IZJ3 1885 aa12.72□□□□□ -0.37
LIMK1-208ENST00000538333 NOTOA8MTQ0 251 aa12.71□□□□□ -0.37
LIMK1-208ENST00000538333 GPRIN2O60269 458 aa12.71□□□□□ -0.37
LIMK1-208ENST00000538333 FADS1O60427 444 aa12.71□□□□□ -0.37
LIMK1-208ENST00000538333 ARL6IP5O75915 188 aa12.71□□□□□ -0.37
LIMK1-208ENST00000538333 TFPIP10646 304 aa12.71□□□□□ -0.37
LIMK1-208ENST00000538333 EPXP11678 715 aa12.71□□□□□ -0.37
LIMK1-208ENST00000538333 ATF1P18846 271 aa12.71□□□□□ -0.37
LIMK1-208ENST00000538333 GRPRP30550 384 aa12.71□□□□□ -0.37
LIMK1-208ENST00000538333 PI4KAP42356 2102 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms