RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 SPCS3P61009 180 aa10.44□□□□□ -0.74
SEMA4D-221ENST00000537934 CDKN3Q16667 212 aa10.44□□□□□ -0.74
SEMA4D-221ENST00000537934 GLT8D1Q68CQ7 371 aa10.44□□□□□ -0.74
SEMA4D-221ENST00000537934 DMKNQ6E0U4 476 aaPredicted RBP10.44□□□□□ -0.74
SEMA4D-221ENST00000537934 RPL13AP3Q6NVV1 102 aa10.44□□□□□ -0.74
SEMA4D-221ENST00000537934 COMMD6Q7Z4G1 85 aa10.44□□□□□ -0.74
SEMA4D-221ENST00000537934 TMPRSS11BQ86T26 416 aa10.44□□□□□ -0.74
SEMA4D-221ENST00000537934 YAF2Q8IY57 180 aa10.44□□□□□ -0.74
SEMA4D-221ENST00000537934 POMGNT2Q8NAT1 580 aa10.44□□□□□ -0.74
SEMA4D-221ENST00000537934 OR6T1Q8NGN1 323 aa10.44□□□□□ -0.74
SEMA4D-221ENST00000537934 HIST1H2BAQ96A08 127 aa10.44□□□□□ -0.74
SEMA4D-221ENST00000537934 C19orf43Q9BQ61 176 aa10.44□□□□□ -0.74
SEMA4D-221ENST00000537934 CNIH4Q9P003 139 aa10.44□□□□□ -0.74
SEMA4D-221ENST00000537934 C17orf113A0A1B0GUU1 675 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 HMGN4O00479 90 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 OR2T1O43869 369 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 ARL6IP5O75915 188 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 SLC2A10O95528 541 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 CD8AP01732 235 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 RLN1P04808 185 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 ALPPL2P10696 532 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 APEHP13798 732 aaKnown RBP10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 FAUP35544 74 aaKnown RBP10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 METAP1P53582 386 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 TAS2R50P59544 299 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 ALKBH1Q13686 389 aaKnown RBP10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 RHOUQ7L0Q8 258 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 ABHD13Q7L211 337 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 GHSRQ92847 366 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 SLC25A38Q96DW6 304 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 C14orf79Q96F83 325 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 ZDHHC5Q9C0B5 715 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 SLC6A16Q9GZN6 736 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 KCNK12Q9HB15 430 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 AK6Q9Y3D8 172 aaKnown RBP10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 PIKFYVEQ9Y2I7 2098 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 TBC1D3BA6NDS4 549 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 NPIPB9F8W1W9 429 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 PPIHO43447 177 aaKnown RBP10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 SLC25A4P12235 298 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 NT5EP21589 574 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 CERS1P27544 350 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 SDHAP31040 664 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 HOXA6P31267 233 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 OMPP47874 163 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 CBFBQ13951 182 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 SSX2Q16385 188 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 PLEKHN1Q494U1 663 aaPredicted RBP10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 FAM111BQ6SJ93 734 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 CRTC1Q6UUV9 634 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 GDPD4Q6W3E5 623 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 RFLNAQ6ZTI6 216 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 MEPCEQ7L2J0 689 aaKnown RBP10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 C6orf120Q7Z4R8 191 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 KRT77Q7Z794 578 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 TMEM200AQ86VY9 491 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 PARGQ86W56 976 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 VRK3Q8IV63 474 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 GTPBP8Q8N3Z3 284 aaPredicted RBP10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 ARL6IP6Q8N6S5 226 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 SMRP1Q8NCR6 262 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 OR4A4PQ8NGN8 299 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 OR13C5Q8NGS8 318 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 WFIKKN2Q8TEU8 576 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 ELSPBP1Q96BH3 223 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 FAM46AQ96IP4 442 aaKnown RBP10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 CCDC86Q9H6F5 360 aaKnown RBP10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 BRD9Q9H8M2 597 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 SEMA4GQ9NTN9 838 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 RCC2Q9P258 522 aaKnown RBP10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 ZMIZ1Q9ULJ6 1067 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 KIAA1549LQ6ZVL6 1849 aa10.43□□□□□ -0.74
SEMA4D-221ENST00000537934 A0A1W2PPK0 400 aa10.42□□□□□ -0.74
SEMA4D-221ENST00000537934 KLHL18O94889 574 aa10.42□□□□□ -0.74
SEMA4D-221ENST00000537934 MT-ND4LP03901 98 aa10.42□□□□□ -0.74
SEMA4D-221ENST00000537934 ZNF14P17017 642 aaPredicted RBP10.42□□□□□ -0.74
SEMA4D-221ENST00000537934 ST8SIA6P61647 398 aa10.42□□□□□ -0.74
SEMA4D-221ENST00000537934 ILF3Q12906 894 aaKnown RBP eCLIP10.42□□□□□ -0.74
SEMA4D-221ENST00000537934 FNDC3BQ53EP0 1204 aaKnown RBP10.42□□□□□ -0.74
SEMA4D-221ENST00000537934 SLC29A4Q7RTT9 530 aa10.42□□□□□ -0.74
SEMA4D-221ENST00000537934 BEST3Q8N1M1 668 aa10.42□□□□□ -0.74
SEMA4D-221ENST00000537934 OR10H4Q8NGA5 316 aa10.42□□□□□ -0.74
SEMA4D-221ENST00000537934 C15orf40Q8WUR7 153 aa10.42□□□□□ -0.74
SEMA4D-221ENST00000537934 S100A16Q96FQ6 103 aaKnown RBP10.42□□□□□ -0.74
SEMA4D-221ENST00000537934 TEAD3Q99594 435 aa10.42□□□□□ -0.74
SEMA4D-221ENST00000537934 NAA11Q9BSU3 229 aaPredicted RBP10.42□□□□□ -0.74
SEMA4D-221ENST00000537934 KLHL31Q9H511 634 aa10.42□□□□□ -0.74
SEMA4D-221ENST00000537934 XKR8Q9H6D3 395 aa10.42□□□□□ -0.74
SEMA4D-221ENST00000537934 MMP26Q9NRE1 261 aa10.42□□□□□ -0.74
SEMA4D-221ENST00000537934 TMEM100Q9NV29 134 aa10.42□□□□□ -0.74
SEMA4D-221ENST00000537934 FOXJ3Q9UPW0 622 aa10.42□□□□□ -0.74
SEMA4D-221ENST00000537934 OR5H14A6NHG9 310 aa10.42□□□□□ -0.74
SEMA4D-221ENST00000537934 FAM183AA6NL82 134 aa10.42□□□□□ -0.74
SEMA4D-221ENST00000537934 ZNF879B4DU55 563 aa10.42□□□□□ -0.74
SEMA4D-221ENST00000537934 AP4M1O00189 453 aa10.42□□□□□ -0.74
SEMA4D-221ENST00000537934 MAN2B1O00754 1011 aa10.42□□□□□ -0.74
SEMA4D-221ENST00000537934 FADS1O60427 444 aa10.42□□□□□ -0.74
SEMA4D-221ENST00000537934 IFNGP01579 166 aa10.42□□□□□ -0.74
SEMA4D-221ENST00000537934 ANXA2P07355 339 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms