RNA–Protein interactions for RNA: ENST00000537024.5

SNHG1-203, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-203ENST00000537024 NDUFAF7Q7L592 441 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 SMIM29Q86T20 159 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 LACC1Q8IV20 430 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 C12orf56Q8IXR9 622 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 RAB42Q8N4Z0 105 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 CCDC197Q8NCU1 140 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 ZNF540Q8NDQ6 660 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 OR5AP2Q8NGF4 316 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 OR4D10Q8NGI6 311 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 OR5M9Q8NGP3 310 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 GATAD1Q8WUU5 269 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 SMPDL3AQ92484 453 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 ZNF524Q96C55 264 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 CXorf58Q96LI9 332 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 TNFRSF13CQ96RJ3 184 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 S1PR3Q99500 378 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 COQ7Q99807 217 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 SSX3Q99909 188 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 ASCL2Q99929 193 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 FUNDC2Q9BWH2 189 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 ANGPTL4Q9BY76 406 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 DPH5Q9H2P9 285 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 LIN28AQ9H9Z2 209 aaKnown RBP3.35□□□□□ -1.87
SNHG1-203ENST00000537024 EML4Q9HC35 981 aaKnown RBP3.35□□□□□ -1.87
SNHG1-203ENST00000537024 S100A14Q9HCY8 104 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 POLE3Q9NRF9 147 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.35□□□□□ -1.87
SNHG1-203ENST00000537024 DDX28Q9NUL7 540 aaKnown RBP3.35□□□□□ -1.87
SNHG1-203ENST00000537024 HRASLS2Q9NWW9 162 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 MED29Q9NX70 200 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 C6orf203Q9P0P8 240 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-203ENST00000537024 SLC23A2Q9UGH3 650 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 CD84Q9UIB8 345 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 MRTO4Q9UKD2 239 aaKnown RBP3.35□□□□□ -1.87
SNHG1-203ENST00000537024 PLCL2Q9UPR0 1127 aa3.35□□□□□ -1.87
SNHG1-203ENST00000537024 IGHV4-30-2A0A087WSY4 118 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 hCG_38984A0A1B0GV85 526 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 GSAPA4D1B5 854 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 OR6C74A6NCV1 312 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 MSGN1A6NI15 193 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 NPIPA2E9PIF3 369 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 FAM72CH0Y354 149 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 TRAFD1O14545 582 aaPredicted RBP3.34□□□□□ -1.87
SNHG1-203ENST00000537024 NDC80O14777 642 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 BCKDKO14874 412 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 HCRTR1O43613 425 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 KDELR3O43731 214 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 KIAA0513O60268 411 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 NOL3O60936 208 aaKnown RBP3.34□□□□□ -1.87
SNHG1-203ENST00000537024 AKR7A3O95154 331 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 PTBP3O95758 552 aaKnown RBP3.34□□□□□ -1.87
SNHG1-203ENST00000537024 HEXBP07686 556 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 PRSS56P0CW18 603 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 GIFP27352 417 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 FEN1P39748 380 aaKnown RBP3.34□□□□□ -1.87
SNHG1-203ENST00000537024 SOX3P41225 446 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 ALDH3B1P43353 468 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 RGRP47804 291 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 GABRA4P48169 554 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 CCR4P51679 360 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 EFNA3P52797 238 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 XGP55808 180 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 VSX2P58304 361 aaPredicted RBP3.34□□□□□ -1.87
SNHG1-203ENST00000537024 SNRPFP62306 86 aaKnown RBP3.34□□□□□ -1.87
SNHG1-203ENST00000537024 BTG1P62324 171 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 LOXL1Q08397 574 aaPredicted RBP3.34□□□□□ -1.87
SNHG1-203ENST00000537024 MRPL28Q13084 256 aaKnown RBP3.34□□□□□ -1.87
SNHG1-203ENST00000537024 MSLNQ13421 630 aaPredicted RBP3.34□□□□□ -1.87
SNHG1-203ENST00000537024 EFTUD2Q15029 972 aaKnown RBP eCLIP3.34□□□□□ -1.872e-44■■■■■ 44.3
SNHG1-203ENST00000537024 CYTH1Q15438 398 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 TRADDQ15628 312 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 DEFB110Q30KQ9 67 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 FAM76BQ5HYJ3 339 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 FFAR4Q5NUL3 377 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 BRMS1LQ5PSV4 323 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 ACER2Q5QJU3 275 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 FAM72AQ5TYM5 149 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 CYB5R2Q6BCY4 276 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 SLC25A25Q6KCM7 469 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 FAM72DQ6L9T8 149 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 CHMP1BQ7LBR1 199 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 NLRP9Q7RTR0 991 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 FAM72BQ86X60 149 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 TBC1D21Q8IYX1 336 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 DEFB106AQ8N104 65 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 OR5T2Q8NGG2 359 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 OR6M1Q8NGM8 313 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 OR6S1Q8NH40 331 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 SMAP2Q8WU79 429 aaPredicted RBP3.34□□□□□ -1.87
SNHG1-203ENST00000537024 MRPL24Q96A35 216 aaKnown RBP3.34□□□□□ -1.87
SNHG1-203ENST00000537024 RAB39BQ96DA2 213 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 C2orf48Q96LS8 159 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 NPAS2Q99743 824 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 AGPAT1Q99943 283 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 UTP23Q9BRU9 249 aaKnown RBP3.34□□□□□ -1.87
SNHG1-203ENST00000537024 ZYG11BQ9C0D3 744 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 SIRPDQ9H106 197 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 KCNG2Q9UJ96 466 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 HPCAL4Q9UM19 191 aa3.34□□□□□ -1.87
SNHG1-203ENST00000537024 NEU3Q9UQ49 428 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms