RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 IL13RA1P78552 427 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 SLC9A3R2Q15599 337 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 ITPRIPL2Q3MIP1 535 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 COX20Q5RI15 118 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 TMPRSS9Q7Z410 1059 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 GATSQ8NAP1 163 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 BPIFCQ8NFQ6 507 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 OR2AP1Q8NGE2 309 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 LKAAEAR1Q8TD35 194 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 TWSG1Q9GZX9 223 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 DPEP2Q9H4A9 486 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 NPDC1Q9NQX5 325 aaPredicted RBP5.01□□□□□ -1.61
PTPRD-213ENST00000537002 GSN-AS1Q9NRJ2 163 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 V9GY05 133 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 M0QYG6 137 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 SRPX2O60687 465 aaPredicted RBP5.01□□□□□ -1.61
PTPRD-213ENST00000537002 RNGTTO60942 597 aaKnown RBP5.01□□□□□ -1.61
PTPRD-213ENST00000537002 PMS2P2O95744 297 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 ITGB8P26012 769 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 CSF2RBP32927 897 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 PPM1AP35813 382 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 AKR1C3P42330 323 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 EIF2B1Q14232 305 aaKnown RBP5.01□□□□□ -1.61
PTPRD-213ENST00000537002 SYT14P1Q58G82 188 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 LCN10Q6JVE6 187 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 SBSNQ6UWP8 590 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 TPRG1Q6ZUI0 275 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 AVL9Q8NBF6 648 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 CA5BP1Q8WTZ4 195 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 RAB24Q969Q5 203 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 RAB7BQ96AH8 199 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 AP1S3Q96PC3 154 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 SMDT1Q9H4I9 107 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 APMAPQ9HDC9 416 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 C19orf12Q9NSK7 152 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 PPT2Q9UMR5 302 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 ADAMTS5Q9UNA0 930 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 NEU3Q9UQ49 428 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 MRPS33Q9Y291 106 aaKnown RBP5.01□□□□□ -1.61
PTPRD-213ENST00000537002 ATG4BQ9Y4P1 393 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 BACE2Q9Y5Z0 518 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 GBF1Q92538 1859 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 C17orf113A0A1B0GUU1 675 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 MTMR11A4FU01 709 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 P2RX6O15547 441 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 IFNA5P01569 189 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 MBP02144 154 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 ZNF44P15621 663 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 CR2P20023 1033 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 S1PR1P21453 382 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 RSU1Q15404 277 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 SYPL1Q16563 259 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 DRAM2Q6UX65 266 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 Q6ZVU0 165 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 OR9A1PQ8NGU1 263 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 ABHD4Q8TB40 342 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 RSC1A1Q92681 617 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 RRNAD1Q96FB5 475 aaKnown RBP5.01□□□□□ -1.61
PTPRD-213ENST00000537002 RBM18Q96H35 190 aaKnown RBP5.01□□□□□ -1.61
PTPRD-213ENST00000537002 PRRC1Q96M27 445 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 OR14A2Q96R54 314 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 AUNIPQ9H7T9 357 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 B3GALT1Q9Y5Z6 326 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 TRAV27A0A087WT01 109 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 C11orf98E9PRG8 122 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 NPC1O15118 1278 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 EMC8O43402 210 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 LPLP06858 475 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 ASGR2P07307 311 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 SELPP16109 830 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 ELAVL4P26378 380 aaKnown RBP5.01□□□□□ -1.61
PTPRD-213ENST00000537002 SOX18P35713 384 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 SLC6A9P48067 706 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 ARHGAP1Q07960 439 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 VWA2Q5GFL6 755 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 ENTPD8Q5MY95 495 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 OVCH1Q7RTY7 1134 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 KIAA0907Q7Z7F0 614 aaPredicted RBP5.01□□□□□ -1.61
PTPRD-213ENST00000537002 MRGPREQ86SM8 312 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 MRPL52Q86TS9 123 aaKnown RBP5.01□□□□□ -1.61
PTPRD-213ENST00000537002 CMSS1Q9BQ75 279 aaKnown RBP5.01□□□□□ -1.61
PTPRD-213ENST00000537002 PAPOLGQ9BWT3 736 aaKnown RBP5.01□□□□□ -1.61
PTPRD-213ENST00000537002 OR52D1Q9H346 318 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 CSNK1G1Q9HCP0 422 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 OPN4Q9UHM6 478 aa5.01□□□□□ -1.61
PTPRD-213ENST00000537002 A0A1B0GTL3 188 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 HSFX4A0A1B0GTS1 333 aaPredicted RBP5□□□□□ -1.61
PTPRD-213ENST00000537002 HSFX3A0A1B0GWH4 333 aaPredicted RBP5□□□□□ -1.61
PTPRD-213ENST00000537002 DCDC2BA2VCK2 349 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 K7ERQ8 282 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 SOCS6O14544 535 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 IFNA1P01562 189 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 IGLV3-25P01717 112 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 IQCF3P0C7M6 154 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 OR13C7P0DN81 318 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 TAS2R31P59538 309 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 AMZ1Q400G9 498 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 COL13A1Q5TAT6 717 aaPredicted RBP5□□□□□ -1.61
PTPRD-213ENST00000537002 TXNDC8Q6A555 127 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 FRZBQ92765 325 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms