RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 ZNF580Q9UK33 172 aa5.4□□□□□ -1.54
CCDC60-203ENST00000536742 CLCA3PQ9Y6N3 262 aa5.4□□□□□ -1.54
CCDC60-203ENST00000536742 MUC4Q99102 2169 aa5.4□□□□□ -1.55
CCDC60-203ENST00000536742 FRAS1Q86XX4 4008 aa5.4□□□□□ -1.55
CCDC60-203ENST00000536742 ARFGEF3Q5TH69 2177 aa5.39□□□□□ -1.55
CCDC60-203ENST00000536742 KCNE1BA0A087WTH5 132 aa5.39□□□□□ -1.55
CCDC60-203ENST00000536742 A0A1W2PP11 408 aa5.39□□□□□ -1.55
CCDC60-203ENST00000536742 A0A1W2PPV9 198 aa5.39□□□□□ -1.55
CCDC60-203ENST00000536742 A0A1W2PQ09 198 aa5.39□□□□□ -1.55
CCDC60-203ENST00000536742 PSMD12O00232 456 aaPredicted RBP5.39□□□□□ -1.55
CCDC60-203ENST00000536742 TP53I11O14683 189 aa5.39□□□□□ -1.55
CCDC60-203ENST00000536742 CDH16O75309 829 aa5.39□□□□□ -1.55
CCDC60-203ENST00000536742 PROSCO94903 275 aa5.39□□□□□ -1.55
CCDC60-203ENST00000536742 ERCC1P07992 297 aaPredicted RBP5.39□□□□□ -1.55
CCDC60-203ENST00000536742 TCP1P17987 556 aaKnown RBP5.39□□□□□ -1.55
CCDC60-203ENST00000536742 TNNT3P45378 269 aaPredicted RBP5.39□□□□□ -1.55
CCDC60-203ENST00000536742 LHX2P50458 406 aa5.39□□□□□ -1.55
CCDC60-203ENST00000536742 CTBP2P56545 445 aa5.39□□□□□ -1.55
CCDC60-203ENST00000536742 CLDN18P56856 261 aa5.39□□□□□ -1.55
CCDC60-203ENST00000536742 SNRPD2P62316 118 aaKnown RBP5.39□□□□□ -1.55
CCDC60-203ENST00000536742 RELQ04864 619 aaPredicted RBP5.39□□□□□ -1.55
CCDC60-203ENST00000536742 CKAP4Q07065 602 aaKnown RBP5.39□□□□□ -1.55
CCDC60-203ENST00000536742 ASPHQ12797 758 aa5.39□□□□□ -1.55
CCDC60-203ENST00000536742 GAGE5Q13069 117 aa5.39□□□□□ -1.55
CCDC60-203ENST00000536742 GAGE6Q13070 117 aa5.39□□□□□ -1.55
CCDC60-203ENST00000536742 GTF2H2Q13888 395 aa5.39□□□□□ -1.55
CCDC60-203ENST00000536742 KRT81Q14533 505 aa5.39□□□□□ -1.55
CCDC60-203ENST00000536742 SEL1L2Q5TEA6 688 aa5.39□□□□□ -1.55
CCDC60-203ENST00000536742 LRRC38Q5VT99 294 aa5.39□□□□□ -1.55
CCDC60-203ENST00000536742 GTF2H2CQ6P1K8 395 aa5.39□□□□□ -1.55
CCDC60-203ENST00000536742 SATL1Q86VE3 508 aa5.39□□□□□ -1.55
CCDC60-203ENST00000536742 IFNEQ86WN2 208 aa5.39□□□□□ -1.55
CCDC60-203ENST00000536742 SLC22A15Q8IZD6 547 aa5.39□□□□□ -1.55
CCDC60-203ENST00000536742 ZNF619Q8N2I2 560 aa5.39□□□□□ -1.55
CCDC60-203ENST00000536742 ZNF786Q8N393 782 aa5.39□□□□□ -1.55
CCDC60-203ENST00000536742 C17orf53Q8N3J3 647 aaPredicted RBP5.39□□□□□ -1.55
CCDC60-203ENST00000536742 POC5Q8NA72 575 aa5.39□□□□□ -1.55
CCDC60-203ENST00000536742 OR10G3Q8NGC4 313 aa5.39□□□□□ -1.55
CCDC60-203ENST00000536742 DUSP19Q8WTR2 217 aa5.39□□□□□ -1.55
CCDC60-203ENST00000536742 SECTM1Q8WVN6 248 aa5.39□□□□□ -1.55
CCDC60-203ENST00000536742 NXNL1Q96CM4 212 aa5.39□□□□□ -1.55
CCDC60-203ENST00000536742 IMP4Q96G21 291 aaKnown RBP5.39□□□□□ -1.55
CCDC60-203ENST00000536742 MCEEQ96PE7 176 aa5.39□□□□□ -1.55
CCDC60-203ENST00000536742 FERMT1Q9BQL6 677 aa5.39□□□□□ -1.55
CCDC60-203ENST00000536742 INPP5KQ9BT40 448 aa5.39□□□□□ -1.55
CCDC60-203ENST00000536742 RCC2Q9P258 522 aaKnown RBP5.39□□□□□ -1.55
CCDC60-203ENST00000536742 NUP50Q9UKX7 468 aa5.39□□□□□ -1.55
CCDC60-203ENST00000536742 ZNF175Q9Y473 711 aa5.39□□□□□ -1.55
CCDC60-203ENST00000536742 MMACHCQ9Y4U1 282 aa5.39□□□□□ -1.55
CCDC60-203ENST00000536742 HERC1Q15751 4861 aa5.39□□□□□ -1.55
CCDC60-203ENST00000536742 IGKV1-8A0A0C4DH67 115 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 ZCWPW2A0A1B0GU75 182 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 ZNF860A6NHJ4 632 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 PSTPIP1O43586 416 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 ZNF189O75820 626 aaPredicted RBP5.38□□□□□ -1.55
CCDC60-203ENST00000536742 MYOD1P15172 320 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 PTAFRP25105 342 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 RPA3P35244 121 aaPredicted RBP5.38□□□□□ -1.55
CCDC60-203ENST00000536742 RFX3P48380 749 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 NPY2RP49146 381 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 STARP49675 285 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 RWDD2BP57060 319 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 RPS15AP62244 130 aaKnown RBP5.38□□□□□ -1.55
CCDC60-203ENST00000536742 PLIN5Q00G26 463 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 PRDX1Q06830 199 aaKnown RBP5.38□□□□□ -1.55
CCDC60-203ENST00000536742 SPOCK1Q08629 439 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 PPA1Q15181 289 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 GPR33Q49SQ1 333 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 FASTKD1Q53R41 847 aaKnown RBP5.38□□□□□ -1.55
CCDC60-203ENST00000536742 TIGD3Q6B0B8 471 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 C18orf65Q6ZTR6 163 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 SNX20Q7Z614 316 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 ADCK2Q7Z695 626 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 SLC35F6Q8N357 371 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 CLDN19Q8N6F1 224 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 CEP112Q8N8E3 955 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 NIPA2Q8N8Q9 360 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 OR1J4Q8NGS1 313 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 CLDND2Q8NHS1 167 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 CFAP61Q8NHU2 1237 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 GSDMBQ8TAX9 411 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 NUBPLQ8TB37 319 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 BLOC1S5Q8TDH9 187 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 MUCL1Q96DR8 90 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 DTNBP1Q96EV8 351 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 RILPQ96NA2 401 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 LRRC1Q9BTT6 524 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 RAB1BQ9H0U4 201 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 CENPHQ9H3R5 247 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 RAD21L1Q9H4I0 556 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 ZNF556Q9HAH1 456 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 MYNNQ9NPC7 610 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 PLEK2Q9NYT0 353 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 PCSK1NQ9UHG2 260 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 HYOU1Q9Y4L1 999 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 SAR1BQ9Y6B6 198 aa5.38□□□□□ -1.55
CCDC60-203ENST00000536742 WI2-2373I1.2A0A1W2PRP0 233 aa5.37□□□□□ -1.55
CCDC60-203ENST00000536742 PRSS47A8MTI9 375 aa5.37□□□□□ -1.55
CCDC60-203ENST00000536742 CTDSP2O14595 271 aa5.37□□□□□ -1.55
CCDC60-203ENST00000536742 DVL1O14640 695 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms