RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 OR10G3Q8NGC4 313 aa3.85□□□□□ -1.79
PRKDC-208ENST00000536710 C7orf33Q8WU49 177 aa3.85□□□□□ -1.79
PRKDC-208ENST00000536710 UCN3Q969E3 161 aa3.85□□□□□ -1.79
PRKDC-208ENST00000536710 RPUSD4Q96CM3 377 aaKnown RBP3.85□□□□□ -1.79
PRKDC-208ENST00000536710 RASD2Q96D21 266 aa3.85□□□□□ -1.79
PRKDC-208ENST00000536710 PLEKHF1Q96S99 279 aa3.85□□□□□ -1.79
PRKDC-208ENST00000536710 GBA3Q9H227 469 aa3.85□□□□□ -1.79
PRKDC-208ENST00000536710 NIPAL2Q9H841 368 aa3.85□□□□□ -1.79
PRKDC-208ENST00000536710 ZFP14Q9HCL3 533 aa3.85□□□□□ -1.79
PRKDC-208ENST00000536710 PRR34Q9NV39 138 aa3.85□□□□□ -1.79
PRKDC-208ENST00000536710 GIN1Q9NXP7 522 aa3.85□□□□□ -1.79
PRKDC-208ENST00000536710 PISDQ9UG56 409 aa3.85□□□□□ -1.79
PRKDC-208ENST00000536710 CCDC182A6NF36 153 aa3.84□□□□□ -1.79
PRKDC-208ENST00000536710 EMC8O43402 210 aa3.84□□□□□ -1.79
PRKDC-208ENST00000536710 ERLIN2O94905 339 aa3.84□□□□□ -1.79
PRKDC-208ENST00000536710 UBTFL1P0CB47 393 aaPredicted RBP3.84□□□□□ -1.79
PRKDC-208ENST00000536710 TROVE2P10155 538 aaKnown RBP eCLIP3.84□□□□□ -1.79
PRKDC-208ENST00000536710 HSD17B2P37059 387 aa3.84□□□□□ -1.79
PRKDC-208ENST00000536710 TAS2R19P59542 299 aa3.84□□□□□ -1.79
PRKDC-208ENST00000536710 KRTAP10-12P60413 245 aa3.84□□□□□ -1.79
PRKDC-208ENST00000536710 PRPS1P60891 318 aa3.84□□□□□ -1.79
PRKDC-208ENST00000536710 BEX3Q00994 111 aa3.84□□□□□ -1.79
PRKDC-208ENST00000536710 ATP6AP1Q15904 470 aa3.84□□□□□ -1.79
PRKDC-208ENST00000536710 ZNF79Q15937 498 aa3.84□□□□□ -1.79
PRKDC-208ENST00000536710 ZNF546Q86UE3 836 aa3.84□□□□□ -1.79
PRKDC-208ENST00000536710 CDR2LQ86X02 465 aaPredicted RBP3.84□□□□□ -1.79
PRKDC-208ENST00000536710 PSTKQ8IV42 348 aaKnown RBP3.84□□□□□ -1.79
PRKDC-208ENST00000536710 OR2L3Q8NG85 312 aa3.84□□□□□ -1.79
PRKDC-208ENST00000536710 LINC01006Q8NI28 216 aa3.84□□□□□ -1.79
PRKDC-208ENST00000536710 SETD7Q8WTS6 366 aaKnown RBP3.84□□□□□ -1.79
PRKDC-208ENST00000536710 STMN2Q93045 179 aa3.84□□□□□ -1.79
PRKDC-208ENST00000536710 PHYHIPLQ96FC7 376 aa3.84□□□□□ -1.79
PRKDC-208ENST00000536710 ITCHQ96J02 903 aa3.84□□□□□ -1.79
PRKDC-208ENST00000536710 GPR61Q9BZJ8 451 aa3.84□□□□□ -1.79
PRKDC-208ENST00000536710 CTNNA3Q9UI47 895 aa3.84□□□□□ -1.79
PRKDC-208ENST00000536710 FAM231BA6NCW3 169 aa3.83□□□□□ -1.8
PRKDC-208ENST00000536710 OR7A10O76100 309 aa3.83□□□□□ -1.8
PRKDC-208ENST00000536710 KLF8O95600 359 aaPredicted RBP3.83□□□□□ -1.8
PRKDC-208ENST00000536710 SERPIND1P05546 499 aa3.83□□□□□ -1.8
PRKDC-208ENST00000536710 FMO3P31513 532 aa3.83□□□□□ -1.8
PRKDC-208ENST00000536710 PDIA2Q13087 525 aaKnown RBP3.83□□□□□ -1.8
PRKDC-208ENST00000536710 TGFBIQ15582 683 aa3.83□□□□□ -1.8
PRKDC-208ENST00000536710 ZNF77Q15935 545 aa3.83□□□□□ -1.8
PRKDC-208ENST00000536710 HSP90AB3PQ58FF7 597 aa3.83□□□□□ -1.8
PRKDC-208ENST00000536710 GPR157Q5UAW9 335 aa3.83□□□□□ -1.8
PRKDC-208ENST00000536710 TMEM107Q6UX40 140 aa3.83□□□□□ -1.8
PRKDC-208ENST00000536710 PRSS41Q7RTY9 318 aa3.83□□□□□ -1.8
PRKDC-208ENST00000536710 PAQR7Q86WK9 346 aa3.83□□□□□ -1.8
PRKDC-208ENST00000536710 C11orf53Q8IXP5 236 aa3.83□□□□□ -1.8
PRKDC-208ENST00000536710 OR4F6Q8NGB9 312 aa3.83□□□□□ -1.8
PRKDC-208ENST00000536710 OR6C4Q8NGE1 309 aa3.83□□□□□ -1.8
PRKDC-208ENST00000536710 MS4A4EQ96PG1 132 aa3.83□□□□□ -1.8
PRKDC-208ENST00000536710 KCNA7Q96RP8 456 aa3.83□□□□□ -1.8
PRKDC-208ENST00000536710 PELOQ9BRX2 385 aaKnown RBP3.83□□□□□ -1.8
PRKDC-208ENST00000536710 NUP58Q9BVL2 599 aa3.83□□□□□ -1.8
PRKDC-208ENST00000536710 HES7Q9BYE0 225 aa3.83□□□□□ -1.8
PRKDC-208ENST00000536710 ROGDIQ9GZN7 287 aa3.83□□□□□ -1.8
PRKDC-208ENST00000536710 FAM192AQ9GZU8 254 aa3.83□□□□□ -1.8
PRKDC-208ENST00000536710 C20orf85Q9H1P6 137 aa3.83□□□□□ -1.8
PRKDC-208ENST00000536710 PSMC3IPQ9P2W1 217 aaPredicted RBP3.83□□□□□ -1.8
PRKDC-208ENST00000536710 CDH10Q9Y6N8 788 aa3.83□□□□□ -1.8
PRKDC-208ENST00000536710 A0A1W2PPE3 182 aa3.82□□□□□ -1.8
PRKDC-208ENST00000536710 A8MUA0 341 aa3.82□□□□□ -1.8
PRKDC-208ENST00000536710 E9PBE3 544 aa3.82□□□□□ -1.8
PRKDC-208ENST00000536710 SGK1O00141 431 aa3.82□□□□□ -1.8
PRKDC-208ENST00000536710 UPK3AO75631 287 aa3.82□□□□□ -1.8
PRKDC-208ENST00000536710 TMEM50AO95807 157 aa3.82□□□□□ -1.8
PRKDC-208ENST00000536710 GIPP09681 153 aaPredicted RBP3.82□□□□□ -1.8
PRKDC-208ENST00000536710 TOP1P11387 765 aaKnown RBP3.82□□□□□ -1.8
PRKDC-208ENST00000536710 TBPP20226 339 aa3.82□□□□□ -1.8
PRKDC-208ENST00000536710 FUT3P21217 361 aa3.82□□□□□ -1.8
PRKDC-208ENST00000536710 CRYBB2P43320 205 aa3.82□□□□□ -1.8
PRKDC-208ENST00000536710 PLP1P60201 277 aa3.82□□□□□ -1.8
PRKDC-208ENST00000536710 LYZP61626 148 aa3.82□□□□□ -1.8
PRKDC-208ENST00000536710 ERVK-25P63136 954 aa3.82□□□□□ -1.8
PRKDC-208ENST00000536710 KCNJ2P63252 427 aa3.82□□□□□ -1.8
PRKDC-208ENST00000536710 PPIL2Q13356 520 aa3.82□□□□□ -1.8
PRKDC-208ENST00000536710 CUL2Q13617 745 aa3.82□□□□□ -1.8
PRKDC-208ENST00000536710 RCN1Q15293 331 aa3.82□□□□□ -1.8
PRKDC-208ENST00000536710 DGUOKQ16854 277 aa3.82□□□□□ -1.8
PRKDC-208ENST00000536710 ARMC12Q5T9G4 340 aa3.82□□□□□ -1.8
PRKDC-208ENST00000536710 C1orf94Q6P1W5 598 aa3.82□□□□□ -1.8
PRKDC-208ENST00000536710 ZNF620Q6ZNG0 422 aa3.82□□□□□ -1.8
PRKDC-208ENST00000536710 RNF165Q6ZSG1 346 aa3.82□□□□□ -1.8
PRKDC-208ENST00000536710 PNKDQ8N490 385 aa3.82□□□□□ -1.8
PRKDC-208ENST00000536710 CEP112Q8N8E3 955 aa3.82□□□□□ -1.8
PRKDC-208ENST00000536710 NKAPP1Q8N9T2 125 aa3.82□□□□□ -1.8
PRKDC-208ENST00000536710 ARPC1AQ92747 370 aa3.82□□□□□ -1.8
PRKDC-208ENST00000536710 TM4SF19Q96DZ7 209 aa3.82□□□□□ -1.8
PRKDC-208ENST00000536710 TMEM101Q96IK0 257 aa3.82□□□□□ -1.8
PRKDC-208ENST00000536710 HSFY1Q96LI6 401 aa3.82□□□□□ -1.8
PRKDC-208ENST00000536710 OR8B4Q96RC9 309 aa3.82□□□□□ -1.8
PRKDC-208ENST00000536710 CENPKQ9BS16 269 aa3.82□□□□□ -1.8
PRKDC-208ENST00000536710 VPS37BQ9H9H4 285 aa3.82□□□□□ -1.8
PRKDC-208ENST00000536710 SIAEQ9HAT2 523 aa3.82□□□□□ -1.8
PRKDC-208ENST00000536710 MRPL47Q9HD33 250 aaKnown RBP3.82□□□□□ -1.8
PRKDC-208ENST00000536710 QPCTLQ9NXS2 382 aa3.82□□□□□ -1.8
PRKDC-208ENST00000536710 MTRF1LQ9UGC7 380 aaKnown RBP3.82□□□□□ -1.8
PRKDC-208ENST00000536710 KIF25-AS1Q9Y6Z4 181 aa3.82□□□□□ -1.8
PRKDC-208ENST00000536710 PLEKHG1Q9ULL1 1385 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms