RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 GALNT8Q9NY28 637 aa11.61□□□□□ -0.55
CHFR-210ENST00000535527 COQ3Q9NZJ6 369 aa11.61□□□□□ -0.55
CHFR-210ENST00000535527 ZNF629Q9UEG4 869 aaPredicted RBP11.61□□□□□ -0.55
CHFR-210ENST00000535527 TESMINQ9Y4I5 508 aa11.61□□□□□ -0.55
CHFR-210ENST00000535527 FAM221AA4D161 298 aa11.6□□□□□ -0.55
CHFR-210ENST00000535527 A8MXE2 369 aa11.6□□□□□ -0.55
CHFR-210ENST00000535527 CDC42EP2O14613 210 aa11.6□□□□□ -0.55
CHFR-210ENST00000535527 CH25HO95992 272 aa11.6□□□□□ -0.55
CHFR-210ENST00000535527 GPIP06744 558 aa11.6□□□□□ -0.55
CHFR-210ENST00000535527 LIMS1P48059 325 aa11.6□□□□□ -0.55
CHFR-210ENST00000535527 ASCL1P50553 236 aa11.6□□□□□ -0.55
CHFR-210ENST00000535527 MAP2K6P52564 334 aa11.6□□□□□ -0.55
CHFR-210ENST00000535527 GTF2A1P52655 376 aaPredicted RBP11.6□□□□□ -0.55
CHFR-210ENST00000535527 CCNIQ14094 377 aa11.6□□□□□ -0.55
CHFR-210ENST00000535527 TSC22D1Q15714 1073 aa11.6□□□□□ -0.55
CHFR-210ENST00000535527 SLC25A35Q3KQZ1 300 aa11.6□□□□□ -0.55
CHFR-210ENST00000535527 FBXL19-AS1Q494R0 122 aa11.6□□□□□ -0.55
CHFR-210ENST00000535527 OR2A2Q6IF42 318 aa11.6□□□□□ -0.55
CHFR-210ENST00000535527 LINGO2Q7L985 606 aa11.6□□□□□ -0.55
CHFR-210ENST00000535527 DHFR2Q86XF0 187 aa11.6□□□□□ -0.55
CHFR-210ENST00000535527 NRMQ8IXM6 262 aa11.6□□□□□ -0.55
CHFR-210ENST00000535527 OR9K2Q8NGE7 335 aa11.6□□□□□ -0.55
CHFR-210ENST00000535527 OR6K3Q8NGY3 331 aa11.6□□□□□ -0.55
CHFR-210ENST00000535527 TMEM239Q8WW34 195 aa11.6□□□□□ -0.55
CHFR-210ENST00000535527 MPP4Q96JB8 637 aa11.6□□□□□ -0.55
CHFR-210ENST00000535527 POLR2J2Q9GZM3 115 aaKnown RBP11.6□□□□□ -0.55
CHFR-210ENST00000535527 POLR2J3Q9H1A7 115 aaKnown RBP11.6□□□□□ -0.55
CHFR-210ENST00000535527 STOML1Q9UBI4 398 aa11.6□□□□□ -0.55
CHFR-210ENST00000535527 TCRBV3S1A0A5B6 114 aa11.59□□□□□ -0.55
CHFR-210ENST00000535527 DVL2O14641 736 aa11.59□□□□□ -0.55
CHFR-210ENST00000535527 SMNDC1O75940 238 aaKnown RBP eCLIP11.59□□□□□ -0.55
CHFR-210ENST00000535527 IGHV3-9P01782 118 aa11.59□□□□□ -0.55
CHFR-210ENST00000535527 CRHP06850 196 aa11.59□□□□□ -0.55
CHFR-210ENST00000535527 TSPAN19P0C672 248 aa11.59□□□□□ -0.55
CHFR-210ENST00000535527 ASAH2BP0C7U1 165 aa11.59□□□□□ -0.55
CHFR-210ENST00000535527 THRBP10828 461 aa11.59□□□□□ -0.55
CHFR-210ENST00000535527 CD8BP10966 210 aa11.59□□□□□ -0.55
CHFR-210ENST00000535527 FXYD6P3P58550 94 aa11.59□□□□□ -0.55
CHFR-210ENST00000535527 TLE4Q04727 773 aa11.59□□□□□ -0.55
CHFR-210ENST00000535527 FAM27E3Q08E93 113 aa11.59□□□□□ -0.55
CHFR-210ENST00000535527 LAPTM4AQ15012 233 aa11.59□□□□□ -0.55
CHFR-210ENST00000535527 RNPS1Q15287 305 aaKnown RBP11.59□□□□□ -0.55
CHFR-210ENST00000535527 SF3B4Q15427 424 aaKnown RBP eCLIP11.59□□□□□ -0.552e-6■■■■□ 25.8
CHFR-210ENST00000535527 PODNL1Q6PEZ8 512 aa11.59□□□□□ -0.55
CHFR-210ENST00000535527 TMEM179BQ7Z7N9 219 aa11.59□□□□□ -0.55
CHFR-210ENST00000535527 ZDHHC21Q8IVQ6 265 aa11.59□□□□□ -0.55
CHFR-210ENST00000535527 OR4C15Q8NGM1 316 aa11.59□□□□□ -0.55
CHFR-210ENST00000535527 OR6S1Q8NH40 331 aa11.59□□□□□ -0.55
CHFR-210ENST00000535527 MOSPD2Q8NHP6 518 aa11.59□□□□□ -0.55
CHFR-210ENST00000535527 PIGXQ8TBF5 258 aa11.59□□□□□ -0.55
CHFR-210ENST00000535527 CANT1Q8WVQ1 401 aa11.59□□□□□ -0.55
CHFR-210ENST00000535527 TMUB1Q9BVT8 246 aa11.59□□□□□ -0.55
CHFR-210ENST00000535527 MUC13Q9H3R2 512 aa11.59□□□□□ -0.55
CHFR-210ENST00000535527 IL1RAPQ9NPH3 570 aa11.59□□□□□ -0.55
CHFR-210ENST00000535527 TAS2R5Q9NYW4 299 aa11.59□□□□□ -0.55
CHFR-210ENST00000535527 RAI1Q7Z5J4 1906 aaPredicted RBP11.58□□□□□ -0.55
CHFR-210ENST00000535527 ZNF724A8MTY0 619 aa11.58□□□□□ -0.56
CHFR-210ENST00000535527 EBAG9O00559 213 aa11.58□□□□□ -0.56
CHFR-210ENST00000535527 PLPP3O14495 311 aa11.58□□□□□ -0.56
CHFR-210ENST00000535527 KLF4O43474 513 aa11.58□□□□□ -0.56
CHFR-210ENST00000535527 OR7A10O76100 309 aa11.58□□□□□ -0.56
CHFR-210ENST00000535527 FABP3P05413 133 aa11.58□□□□□ -0.56
CHFR-210ENST00000535527 YES1P07947 543 aa11.58□□□□□ -0.56
CHFR-210ENST00000535527 CD99P14209 185 aa11.58□□□□□ -0.56
CHFR-210ENST00000535527 RHCEP18577 417 aa11.58□□□□□ -0.56
CHFR-210ENST00000535527 FKBP2P26885 142 aaKnown RBP11.58□□□□□ -0.56
CHFR-210ENST00000535527 RRM2P31350 389 aa11.58□□□□□ -0.56
CHFR-210ENST00000535527 RBM34P42696 430 aaKnown RBP11.58□□□□□ -0.56
CHFR-210ENST00000535527 GPR4P46093 362 aa11.58□□□□□ -0.56
CHFR-210ENST00000535527 OR3A2P47893 321 aa11.58□□□□□ -0.56
CHFR-210ENST00000535527 SELENOPP49908 381 aa11.58□□□□□ -0.56
CHFR-210ENST00000535527 IST1P53990 364 aa11.58□□□□□ -0.56
CHFR-210ENST00000535527 ST3GAL3Q11203 375 aa11.58□□□□□ -0.56
CHFR-210ENST00000535527 TRAP1Q12931 704 aaKnown RBP11.58□□□□□ -0.56
CHFR-210ENST00000535527 TRAM2Q15035 370 aa11.58□□□□□ -0.56
CHFR-210ENST00000535527 PDK3Q15120 406 aa11.58□□□□□ -0.56
CHFR-210ENST00000535527 PHYHD1Q5SRE7 291 aa11.58□□□□□ -0.56
CHFR-210ENST00000535527 TTC33Q6PID6 262 aaPredicted RBP11.58□□□□□ -0.56
CHFR-210ENST00000535527 CREB3L2Q70SY1 520 aa11.58□□□□□ -0.56
CHFR-210ENST00000535527 PIWIL3Q7Z3Z3 882 aaKnown RBP11.58□□□□□ -0.56
CHFR-210ENST00000535527 GABRG1Q8N1C3 465 aa11.58□□□□□ -0.56
CHFR-210ENST00000535527 SLC43A2Q8N370 569 aa11.58□□□□□ -0.56
CHFR-210ENST00000535527 LRRC75AQ8NAA5 344 aa11.58□□□□□ -0.56
CHFR-210ENST00000535527 OR13C2Q8NGS9 318 aa11.58□□□□□ -0.56
CHFR-210ENST00000535527 OR52J3Q8NH60 311 aa11.58□□□□□ -0.56
CHFR-210ENST00000535527 TXNDC15Q96J42 360 aa11.58□□□□□ -0.56
CHFR-210ENST00000535527 PIP5K1AQ99755 562 aa11.58□□□□□ -0.56
CHFR-210ENST00000535527 TAPBPLQ9BX59 468 aa11.58□□□□□ -0.56
CHFR-210ENST00000535527 ENKD1Q9H0I2 346 aa11.58□□□□□ -0.56
CHFR-210ENST00000535527 TIGARQ9NQ88 270 aa11.58□□□□□ -0.56
CHFR-210ENST00000535527 PLSCR4Q9NRQ2 329 aa11.58□□□□□ -0.56
CHFR-210ENST00000535527 MRPL39Q9NYK5 338 aaKnown RBP11.58□□□□□ -0.56
CHFR-210ENST00000535527 KLHL9Q9P2J3 617 aa11.58□□□□□ -0.56
CHFR-210ENST00000535527 LYVE1Q9Y5Y7 322 aa11.58□□□□□ -0.56
CHFR-210ENST00000535527 A0A1W2PRQ8 180 aa11.57□□□□□ -0.56
CHFR-210ENST00000535527 MSTNO14793 375 aa11.57□□□□□ -0.56
CHFR-210ENST00000535527 SIAH2O43255 324 aa11.57□□□□□ -0.56
CHFR-210ENST00000535527 ZNF432O94892 652 aa11.57□□□□□ -0.56
CHFR-210ENST00000535527 PLGP00747 810 aaPredicted RBP11.57□□□□□ -0.56
CHFR-210ENST00000535527 H1F0P07305 194 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms