RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 OR7G1Q8NGA0 311 aa16.84■□□□□ 0.29
SFSWAP-203ENST00000535236 ANKRD9Q96BM1 317 aaPredicted RBP16.84■□□□□ 0.29
SFSWAP-203ENST00000535236 PBX4Q9BYU1 374 aa16.84■□□□□ 0.29
SFSWAP-203ENST00000535236 PPA2Q9H2U2 334 aa16.84■□□□□ 0.29
SFSWAP-203ENST00000535236 NOX4Q9NPH5 578 aa16.84■□□□□ 0.29
SFSWAP-203ENST00000535236 GPR171O14626 319 aa16.84■□□□□ 0.29
SFSWAP-203ENST00000535236 ZNF91Q05481 1191 aa16.84■□□□□ 0.29
SFSWAP-203ENST00000535236 EXT1Q16394 746 aa16.84■□□□□ 0.29
SFSWAP-203ENST00000535236 PRICKLE2Q7Z3G6 844 aa16.84■□□□□ 0.29
SFSWAP-203ENST00000535236 TCTEX1D2Q8WW35 142 aa16.84■□□□□ 0.29
SFSWAP-203ENST00000535236 RAB3CQ96E17 227 aa16.84■□□□□ 0.29
SFSWAP-203ENST00000535236 RBMXL1Q96E39 390 aaKnown RBP16.84■□□□□ 0.29
SFSWAP-203ENST00000535236 CD300AQ9UGN4 299 aa16.84■□□□□ 0.29
SFSWAP-203ENST00000535236 MRPS28Q9Y2Q9 187 aaKnown RBP16.84■□□□□ 0.29
SFSWAP-203ENST00000535236 TCRBV3S1A0A5B6 114 aa16.84■□□□□ 0.29
SFSWAP-203ENST00000535236 EMX1Q04741 257 aaPredicted RBP16.84■□□□□ 0.29
SFSWAP-203ENST00000535236 LEXMQ3ZCV2 418 aa16.84■□□□□ 0.29
SFSWAP-203ENST00000535236 C14orf28Q4W4Y0 310 aa16.84■□□□□ 0.29
SFSWAP-203ENST00000535236 CST9LP1Q5W188 147 aa16.84■□□□□ 0.29
SFSWAP-203ENST00000535236 ALKAL1Q6UXT8 129 aa16.84■□□□□ 0.29
SFSWAP-203ENST00000535236 APOOLQ6UXV4 268 aa16.84■□□□□ 0.29
SFSWAP-203ENST00000535236 TEX19Q8NA77 164 aa16.84■□□□□ 0.29
SFSWAP-203ENST00000535236 OR13H1Q8NG92 308 aa16.84■□□□□ 0.29
SFSWAP-203ENST00000535236 SLC38A5Q8WUX1 472 aa16.84■□□□□ 0.29
SFSWAP-203ENST00000535236 B3GAT1Q9P2W7 334 aa16.84■□□□□ 0.29
SFSWAP-203ENST00000535236 LRRC30A6NM36 301 aa16.84■□□□□ 0.29
SFSWAP-203ENST00000535236 KCNK2O95069 426 aa16.84■□□□□ 0.29
SFSWAP-203ENST00000535236 SLC35E2P0CK97 266 aa16.84■□□□□ 0.29
SFSWAP-203ENST00000535236 OR1D5P58170 312 aa16.84■□□□□ 0.29
SFSWAP-203ENST00000535236 SLCO4C1Q6ZQN7 724 aa16.84■□□□□ 0.29
SFSWAP-203ENST00000535236 ZNF687Q8N1G0 1237 aa16.84■□□□□ 0.29
SFSWAP-203ENST00000535236 DHRS4Q9BTZ2 278 aa16.84■□□□□ 0.29
SFSWAP-203ENST00000535236 MS4A8Q9BY19 250 aa16.84■□□□□ 0.29
SFSWAP-203ENST00000535236 GFOD1Q9NXC2 390 aa16.84■□□□□ 0.29
SFSWAP-203ENST00000535236 PGAP2Q9UHJ9 254 aa16.84■□□□□ 0.29
SFSWAP-203ENST00000535236 ALOX12BO75342 701 aa16.83■□□□□ 0.29
SFSWAP-203ENST00000535236 GASTP01350 101 aa16.83■□□□□ 0.29
SFSWAP-203ENST00000535236 IL1AP01583 271 aa16.83■□□□□ 0.29
SFSWAP-203ENST00000535236 GM2AP17900 193 aa16.83■□□□□ 0.29
SFSWAP-203ENST00000535236 AKR1C1Q04828 323 aa16.83■□□□□ 0.29
SFSWAP-203ENST00000535236 SELPLGQ14242 412 aa16.83■□□□□ 0.29
SFSWAP-203ENST00000535236 TMEM52BQ4KMG9 183 aa16.83■□□□□ 0.29
SFSWAP-203ENST00000535236 AARDQ4LEZ3 155 aa16.83■□□□□ 0.29
SFSWAP-203ENST00000535236 FAM26DQ5JW98 314 aa16.83■□□□□ 0.29
SFSWAP-203ENST00000535236 ELP4Q96EB1 424 aa16.83■□□□□ 0.29
SFSWAP-203ENST00000535236 CPPED1Q9BRF8 314 aaPredicted RBP16.83■□□□□ 0.29
SFSWAP-203ENST00000535236 CDCP1Q9H5V8 836 aa16.83■□□□□ 0.29
SFSWAP-203ENST00000535236 WDR76Q9H967 626 aa16.83■□□□□ 0.29
SFSWAP-203ENST00000535236 SLC22A23A1A5C7 686 aa16.83■□□□□ 0.29
SFSWAP-203ENST00000535236 HTR2CP28335 458 aa16.83■□□□□ 0.29
SFSWAP-203ENST00000535236 RFLNAQ6ZTI6 216 aa16.83■□□□□ 0.29
SFSWAP-203ENST00000535236 CYP4V2Q6ZWL3 525 aaPredicted RBP16.83■□□□□ 0.29
SFSWAP-203ENST00000535236 UHRF2Q96PU4 802 aa16.83■□□□□ 0.29
SFSWAP-203ENST00000535236 SLC38A1Q9H2H9 487 aa16.83■□□□□ 0.29
SFSWAP-203ENST00000535236 RCE1Q9Y256 329 aa16.83■□□□□ 0.29
SFSWAP-203ENST00000535236 AKAP12Q02952 1782 aa16.83■□□□□ 0.29
SFSWAP-203ENST00000535236 B4GAT1O43505 415 aa16.83■□□□□ 0.28
SFSWAP-203ENST00000535236 PIP5K1CO60331 668 aa16.83■□□□□ 0.28
SFSWAP-203ENST00000535236 MYH11P35749 1972 aa16.83■□□□□ 0.28
SFSWAP-203ENST00000535236 LINC01553A4QN01 128 aa16.83■□□□□ 0.28
SFSWAP-203ENST00000535236 TNFRSF10AO00220 468 aa16.83■□□□□ 0.28
SFSWAP-203ENST00000535236 OR7A17O14581 309 aa16.83■□□□□ 0.28
SFSWAP-203ENST00000535236 ZNF749O43361 778 aa16.83■□□□□ 0.28
SFSWAP-203ENST00000535236 ETV6P41212 452 aa16.83■□□□□ 0.28
SFSWAP-203ENST00000535236 MFGE8Q08431 387 aaPredicted RBP16.83■□□□□ 0.28
SFSWAP-203ENST00000535236 OR2G6Q5TZ20 316 aa16.83■□□□□ 0.28
SFSWAP-203ENST00000535236 RNLSQ5VYX0 342 aa16.83■□□□□ 0.28
SFSWAP-203ENST00000535236 PAQR9Q6ZVX9 377 aa16.83■□□□□ 0.28
SFSWAP-203ENST00000535236 PGBD5Q8N414 524 aa16.83■□□□□ 0.28
SFSWAP-203ENST00000535236 SELENOIQ9C0D9 397 aa16.83■□□□□ 0.28
SFSWAP-203ENST00000535236 C12orf49Q9H741 205 aa16.83■□□□□ 0.28
SFSWAP-203ENST00000535236 OBP2AQ9NY56 170 aa16.83■□□□□ 0.28
SFSWAP-203ENST00000535236 LUZP4Q9P127 313 aa16.83■□□□□ 0.28
SFSWAP-203ENST00000535236 CORINQ9Y5Q5 1042 aa16.83■□□□□ 0.28
SFSWAP-203ENST00000535236 ADAM23O75077 832 aa16.83■□□□□ 0.28
SFSWAP-203ENST00000535236 OR2T7P0C7T2 308 aa16.83■□□□□ 0.28
SFSWAP-203ENST00000535236 C21orf33P30042 268 aaPredicted RBP16.83■□□□□ 0.28
SFSWAP-203ENST00000535236 EDDM3BP56851 147 aa16.83■□□□□ 0.28
SFSWAP-203ENST00000535236 TBCEQ15813 527 aaPredicted RBP16.83■□□□□ 0.28
SFSWAP-203ENST00000535236 TBC1D28Q2M2D7 210 aa16.83■□□□□ 0.28
SFSWAP-203ENST00000535236 NOXA1Q86UR1 476 aa16.83■□□□□ 0.28
SFSWAP-203ENST00000535236 OR2T27Q8NH04 317 aa16.83■□□□□ 0.28
SFSWAP-203ENST00000535236 SPPL3Q8TCT6 385 aa16.83■□□□□ 0.28
SFSWAP-203ENST00000535236 UBTD2Q8WUN7 234 aa16.83■□□□□ 0.28
SFSWAP-203ENST00000535236 SECTM1Q8WVN6 248 aa16.83■□□□□ 0.28
SFSWAP-203ENST00000535236 SLC6A17Q9H1V8 727 aa16.83■□□□□ 0.28
SFSWAP-203ENST00000535236 PLEKHM1Q9Y4G2 1056 aa16.83■□□□□ 0.28
SFSWAP-203ENST00000535236 ARFGEF2Q9Y6D5 1785 aa16.82■□□□□ 0.28
SFSWAP-203ENST00000535236 A0A1W2PQ09 198 aa16.82■□□□□ 0.28
SFSWAP-203ENST00000535236 ACOD1A6NK06 481 aa16.82■□□□□ 0.28
SFSWAP-203ENST00000535236 CTNSO60931 367 aa16.82■□□□□ 0.28
SFSWAP-203ENST00000535236 NCR1O76036 304 aa16.82■□□□□ 0.28
SFSWAP-203ENST00000535236 SCAF4O95104 1147 aaKnown RBP16.82■□□□□ 0.28
SFSWAP-203ENST00000535236 ALDOCP09972 364 aaKnown RBP16.82■□□□□ 0.28
SFSWAP-203ENST00000535236 CPT2P23786 658 aa16.82■□□□□ 0.28
SFSWAP-203ENST00000535236 CAMK2BQ13554 666 aa16.82■□□□□ 0.28
SFSWAP-203ENST00000535236 ANKRD10Q9NXR5 420 aa16.82■□□□□ 0.28
SFSWAP-203ENST00000535236 COQ3Q9NZJ6 369 aa16.82■□□□□ 0.28
SFSWAP-203ENST00000535236 NUP188Q5SRE5 1749 aa16.82■□□□□ 0.28
SFSWAP-203ENST00000535236 A0A1B0GX78 115 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms