RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 CLPTM1LQ96KA5 538 aa11.82□□□□□ -0.52
CMTM1-219ENST00000533953 EPYCQ99645 322 aa11.82□□□□□ -0.52
CMTM1-219ENST00000533953 SF3B5Q9BWJ5 86 aaKnown RBP11.82□□□□□ -0.52
CMTM1-219ENST00000533953 RASSF1Q9NS23 344 aa11.82□□□□□ -0.52
CMTM1-219ENST00000533953 C20orf141Q9NUB4 165 aa11.82□□□□□ -0.52
CMTM1-219ENST00000533953 DCAF13Q9NV06 445 aaKnown RBP11.82□□□□□ -0.52
CMTM1-219ENST00000533953 RASD1Q9Y272 281 aa11.82□□□□□ -0.52
CMTM1-219ENST00000533953 FREM1Q5H8C1 2179 aa11.82□□□□□ -0.52
CMTM1-219ENST00000533953 NAV2Q8IVL1 2488 aa11.82□□□□□ -0.52
CMTM1-219ENST00000533953 DCHS2Q6V1P9 2916 aa11.82□□□□□ -0.52
CMTM1-219ENST00000533953 FAM221AA4D161 298 aa11.81□□□□□ -0.52
CMTM1-219ENST00000533953 ENO4A6NNW6 628 aa11.81□□□□□ -0.52
CMTM1-219ENST00000533953 DEFB108AA8MXU0 73 aa11.81□□□□□ -0.52
CMTM1-219ENST00000533953 C11orf98E9PRG8 122 aa11.81□□□□□ -0.52
CMTM1-219ENST00000533953 hCG_2039718K7EN88 272 aa11.81□□□□□ -0.52
CMTM1-219ENST00000533953 PLPP3O14495 311 aa11.81□□□□□ -0.52
CMTM1-219ENST00000533953 ARPC2O15144 300 aa11.81□□□□□ -0.52
CMTM1-219ENST00000533953 UPK3AO75631 287 aa11.81□□□□□ -0.52
CMTM1-219ENST00000533953 IFNW1P05000 195 aa11.81□□□□□ -0.52
CMTM1-219ENST00000533953 CDH2P19022 906 aaPredicted RBP11.81□□□□□ -0.52
CMTM1-219ENST00000533953 PSMB1P20618 241 aaKnown RBP11.81□□□□□ -0.52
CMTM1-219ENST00000533953 IL32P24001 234 aa11.81□□□□□ -0.52
CMTM1-219ENST00000533953 DNAJA1P31689 397 aaKnown RBP11.81□□□□□ -0.52
CMTM1-219ENST00000533953 ITGADQ13349 1161 aa11.81□□□□□ -0.52
CMTM1-219ENST00000533953 C1DQ13901 141 aaKnown RBP11.81□□□□□ -0.52
CMTM1-219ENST00000533953 STK11Q15831 433 aa11.81□□□□□ -0.52
CMTM1-219ENST00000533953 ZNF74Q16587 644 aa11.81□□□□□ -0.52
CMTM1-219ENST00000533953 CARD17Q5XLA6 110 aa11.81□□□□□ -0.52
CMTM1-219ENST00000533953 FBXW10Q5XX13 1052 aa11.81□□□□□ -0.52
CMTM1-219ENST00000533953 TBPL2Q6SJ96 375 aa11.81□□□□□ -0.52
CMTM1-219ENST00000533953 CYP2R1Q6VVX0 501 aa11.81□□□□□ -0.52
CMTM1-219ENST00000533953 LINGO2Q7L985 606 aa11.81□□□□□ -0.52
CMTM1-219ENST00000533953 BHLHA15Q7RTS1 189 aaPredicted RBP11.81□□□□□ -0.52
CMTM1-219ENST00000533953 SLC46A3Q7Z3Q1 461 aa11.81□□□□□ -0.52
CMTM1-219ENST00000533953 ZNF433Q8N7K0 673 aaPredicted RBP11.81□□□□□ -0.52
CMTM1-219ENST00000533953 GEMIN6Q8WXD5 167 aaKnown RBP11.81□□□□□ -0.52
CMTM1-219ENST00000533953 KISS1RQ969F8 398 aaPredicted RBP11.81□□□□□ -0.52
CMTM1-219ENST00000533953 PIK3IP1Q96FE7 263 aa11.81□□□□□ -0.52
CMTM1-219ENST00000533953 OXGR1Q96P68 337 aa11.81□□□□□ -0.52
CMTM1-219ENST00000533953 HS3ST6Q96QI5 342 aa11.81□□□□□ -0.52
CMTM1-219ENST00000533953 ZNF426Q9BUY5 554 aa11.81□□□□□ -0.52
CMTM1-219ENST00000533953 EMC6Q9BV81 110 aa11.81□□□□□ -0.52
CMTM1-219ENST00000533953 ASPNQ9BXN1 380 aa11.81□□□□□ -0.52
CMTM1-219ENST00000533953 POLDIP3Q9BY77 421 aaKnown RBP11.81□□□□□ -0.52
CMTM1-219ENST00000533953 CLEC4MQ9H2X3 399 aaPredicted RBP11.81□□□□□ -0.52
CMTM1-219ENST00000533953 MAN2C1Q9NTJ4 1040 aa11.81□□□□□ -0.52
CMTM1-219ENST00000533953 TAS2R1Q9NYW7 299 aa11.81□□□□□ -0.52
CMTM1-219ENST00000533953 GPR52Q9Y2T5 361 aa11.81□□□□□ -0.52
CMTM1-219ENST00000533953 MAST4O15021 2626 aa11.81□□□□□ -0.52
CMTM1-219ENST00000533953 APCP25054 2843 aa11.81□□□□□ -0.52
CMTM1-219ENST00000533953 KLF4O43474 513 aa11.8□□□□□ -0.52
CMTM1-219ENST00000533953 FZD7O75084 574 aa11.8□□□□□ -0.52
CMTM1-219ENST00000533953 RAD51DO75771 328 aa11.8□□□□□ -0.52
CMTM1-219ENST00000533953 VAMP5O95183 116 aa11.8□□□□□ -0.52
CMTM1-219ENST00000533953 HRGP04196 525 aa11.8□□□□□ -0.52
CMTM1-219ENST00000533953 ITGA5P08648 1049 aa11.8□□□□□ -0.52
CMTM1-219ENST00000533953 UMPSP11172 480 aa11.8□□□□□ -0.52
CMTM1-219ENST00000533953 ZNF43P17038 809 aa11.8□□□□□ -0.52
CMTM1-219ENST00000533953 CALB2P22676 271 aa11.8□□□□□ -0.52
CMTM1-219ENST00000533953 AHCYP23526 432 aa11.8□□□□□ -0.52
CMTM1-219ENST00000533953 PEX19P40855 299 aa11.8□□□□□ -0.52
CMTM1-219ENST00000533953 PCYT1AP49585 367 aa11.8□□□□□ -0.52
CMTM1-219ENST00000533953 MNAT1P51948 309 aa11.8□□□□□ -0.52
CMTM1-219ENST00000533953 MS4A2Q01362 244 aa11.8□□□□□ -0.52
CMTM1-219ENST00000533953 P2RY6Q15077 328 aa11.8□□□□□ -0.52
CMTM1-219ENST00000533953 TAB1Q15750 504 aa11.8□□□□□ -0.52
CMTM1-219ENST00000533953 PHYHD1Q5SRE7 291 aa11.8□□□□□ -0.52
CMTM1-219ENST00000533953 C5orf46Q6UWT4 87 aa11.8□□□□□ -0.52
CMTM1-219ENST00000533953 NHLRC1Q6VVB1 395 aa11.8□□□□□ -0.52
CMTM1-219ENST00000533953 CDC20BQ86Y33 519 aa11.8□□□□□ -0.52
CMTM1-219ENST00000533953 TMEM239Q8WW34 195 aa11.8□□□□□ -0.52
CMTM1-219ENST00000533953 TMEM45BQ96B21 275 aa11.8□□□□□ -0.52
CMTM1-219ENST00000533953 MPP4Q96JB8 637 aa11.8□□□□□ -0.52
CMTM1-219ENST00000533953 C7orf34Q96L11 122 aa11.8□□□□□ -0.52
CMTM1-219ENST00000533953 PRRC1Q96M27 445 aa11.8□□□□□ -0.52
CMTM1-219ENST00000533953 FNDC11Q9BVV2 318 aa11.8□□□□□ -0.52
CMTM1-219ENST00000533953 C1QTNF6Q9BXI9 259 aa11.8□□□□□ -0.52
CMTM1-219ENST00000533953 GORASP2Q9H8Y8 452 aa11.8□□□□□ -0.52
CMTM1-219ENST00000533953 SLC24A3Q9HC58 644 aa11.8□□□□□ -0.52
CMTM1-219ENST00000533953 PARPBPQ9NWS1 579 aa11.8□□□□□ -0.52
CMTM1-219ENST00000533953 MED29Q9NX70 200 aa11.8□□□□□ -0.52
CMTM1-219ENST00000533953 MRPL39Q9NYK5 338 aaKnown RBP11.8□□□□□ -0.52
CMTM1-219ENST00000533953 TAS2R5Q9NYW4 299 aa11.8□□□□□ -0.52
CMTM1-219ENST00000533953 UPB1Q9UBR1 384 aa11.8□□□□□ -0.52
CMTM1-219ENST00000533953 RPS6KA6Q9UK32 745 aa11.8□□□□□ -0.52
CMTM1-219ENST00000533953 B3GALT5Q9Y2C3 310 aa11.8□□□□□ -0.52
CMTM1-219ENST00000533953 PRR14LQ5THK1 2151 aa11.79□□□□□ -0.52
CMTM1-219ENST00000533953 CIB4A0PJX0 185 aa11.79□□□□□ -0.52
CMTM1-219ENST00000533953 TRAF3IP2O43734 574 aaPredicted RBP11.79□□□□□ -0.52
CMTM1-219ENST00000533953 GMNNO75496 209 aa11.79□□□□□ -0.52
CMTM1-219ENST00000533953 PRSS23O95084 383 aa11.79□□□□□ -0.52
CMTM1-219ENST00000533953 MT-ND1P03886 318 aa11.79□□□□□ -0.52
CMTM1-219ENST00000533953 ADORA3P0DMS8 318 aa11.79□□□□□ -0.52
CMTM1-219ENST00000533953 ATP6V1B2P21281 511 aa11.79□□□□□ -0.52
CMTM1-219ENST00000533953 CRYGSP22914 178 aa11.79□□□□□ -0.52
CMTM1-219ENST00000533953 VLDLRP98155 873 aa11.79□□□□□ -0.52
CMTM1-219ENST00000533953 POU3F1Q03052 451 aaPredicted RBP11.79□□□□□ -0.52
CMTM1-219ENST00000533953 ST3GAL3Q11203 375 aa11.79□□□□□ -0.52
CMTM1-219ENST00000533953 FXNQ16595 210 aa11.79□□□□□ -0.52
CMTM1-219ENST00000533953 IQCCQ4KMZ1 466 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms