RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 SSX4O60224 188 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 THBS1P07996 1170 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 TMEM225BP0DP42 221 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 RPS2P15880 293 aaKnown RBP10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 FASLGP48023 281 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 CLDN17P56750 224 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 MCCD1P59942 119 aaPredicted RBP10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 TSPAN31Q12999 210 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 AKR1C8PQ5T2L2 129 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 SFRP4Q6FHJ7 346 aaPredicted RBP10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 OR5T2Q8NGG2 359 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 GPR148Q8TDV2 347 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 OR10A4Q9H209 315 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 SEMA4GQ9NTN9 838 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 USP36Q9P275 1121 aaKnown RBP10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 ATAD5Q96QE3 1844 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 F5H5K5 113 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 SLC16A7O60669 478 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 TGM6O95932 706 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 UCHL1P09936 223 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 RGS6P49758 472 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 LUMP51884 338 aaPredicted RBP10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 NKPD1Q17RQ9 610 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 ZNF584Q8IVC4 421 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 ZNF683Q8IZ20 524 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 ZNF417Q8TAU3 575 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 MED30Q96HR3 178 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 BOD1Q96IK1 185 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 PHB2Q99623 299 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 SERGEFQ9UGK8 458 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 PPT2Q9UMR5 302 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 PTPRZ1P23471 2315 aaPredicted RBP10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 CASP8AP2Q9UKL3 1982 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 KLK8O60259 260 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 TFP02787 698 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 SFTPBP07988 381 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 DRD5P21918 477 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 ZNF616Q08AN1 781 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 BTN1A1Q13410 526 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 GK2Q14410 553 aaPredicted RBP10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 RAB11BQ15907 218 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 FAM69AQ5T7M9 428 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 CPOQ8IVL8 374 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 SYT14Q8NB59 555 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 FAM122AQ96E09 287 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 CNTNAP3BQ96NU0 1288 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 OR5B12Q96R08 314 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 CXorf36Q9H7Y0 433 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 PROCRQ9UNN8 238 aa10.4□□□□□ -0.74
AMBRA1-211ENST00000533727 C21orf140B9A014 251 aa10.4□□□□□ -0.75
AMBRA1-211ENST00000533727 FRS3O43559 492 aa10.4□□□□□ -0.75
AMBRA1-211ENST00000533727 SC5DO75845 299 aa10.4□□□□□ -0.75
AMBRA1-211ENST00000533727 PEX11BO96011 259 aa10.4□□□□□ -0.75
AMBRA1-211ENST00000533727 KIR2DL3P43628 341 aa10.4□□□□□ -0.75
AMBRA1-211ENST00000533727 MECP2P51608 486 aaKnown RBP10.4□□□□□ -0.75
AMBRA1-211ENST00000533727 ATP1B3P54709 279 aa10.4□□□□□ -0.75
AMBRA1-211ENST00000533727 BDH1Q02338 343 aa10.4□□□□□ -0.75
AMBRA1-211ENST00000533727 KEAP1Q14145 624 aa10.4□□□□□ -0.75
AMBRA1-211ENST00000533727 SF3A2Q15428 464 aaKnown RBP10.4□□□□□ -0.75
AMBRA1-211ENST00000533727 ATAD3CQ5T2N8 411 aa10.4□□□□□ -0.75
AMBRA1-211ENST00000533727 METTL11BQ5VVY1 283 aa10.4□□□□□ -0.75
AMBRA1-211ENST00000533727 TRAPPC6BQ86SZ2 158 aa10.4□□□□□ -0.75
AMBRA1-211ENST00000533727 FOXRED1Q96CU9 486 aaPredicted RBP10.4□□□□□ -0.75
AMBRA1-211ENST00000533727 SNX18Q96RF0 628 aa10.4□□□□□ -0.75
AMBRA1-211ENST00000533727 COL4A1P02462 1669 aa10.39□□□□□ -0.75
AMBRA1-211ENST00000533727 CD8B2A6NJW9 211 aa10.39□□□□□ -0.75
AMBRA1-211ENST00000533727 FAM166BA8MTA8 275 aa10.39□□□□□ -0.75
AMBRA1-211ENST00000533727 SORBS2O94875 1100 aaKnown RBP10.39□□□□□ -0.75
AMBRA1-211ENST00000533727 CD8BP10966 210 aa10.39□□□□□ -0.75
AMBRA1-211ENST00000533727 FOSL1P15407 271 aa10.39□□□□□ -0.75
AMBRA1-211ENST00000533727 TACR1P25103 407 aa10.39□□□□□ -0.75
AMBRA1-211ENST00000533727 GCAP28676 217 aa10.39□□□□□ -0.75
AMBRA1-211ENST00000533727 PGGHGQ32M88 737 aa10.39□□□□□ -0.75
AMBRA1-211ENST00000533727 ZNF628Q5EBL2 1059 aa10.39□□□□□ -0.75
AMBRA1-211ENST00000533727 TMEM215Q68D42 235 aa10.39□□□□□ -0.75
AMBRA1-211ENST00000533727 TMEM211Q6ICI0 200 aa10.39□□□□□ -0.75
AMBRA1-211ENST00000533727 WDR74Q6RFH5 385 aaPredicted RBP10.39□□□□□ -0.75
AMBRA1-211ENST00000533727 Q6ZSR9 355 aa10.39□□□□□ -0.75
AMBRA1-211ENST00000533727 TMPRSS12Q86WS5 348 aa10.39□□□□□ -0.75
AMBRA1-211ENST00000533727 RNF175Q8N4F7 328 aa10.39□□□□□ -0.75
AMBRA1-211ENST00000533727 SLC38A5Q8WUX1 472 aa10.39□□□□□ -0.75
AMBRA1-211ENST00000533727 VNN3Q9NY84 501 aa10.39□□□□□ -0.75
AMBRA1-211ENST00000533727 TAS2R8Q9NYW2 309 aa10.39□□□□□ -0.75
AMBRA1-211ENST00000533727 RASD1Q9Y272 281 aa10.39□□□□□ -0.75
AMBRA1-211ENST00000533727 SULT1C2O00338 296 aa10.39□□□□□ -0.75
AMBRA1-211ENST00000533727 TCTN1Q2MV58 587 aa10.39□□□□□ -0.75
AMBRA1-211ENST00000533727 VWA2Q5GFL6 755 aa10.39□□□□□ -0.75
AMBRA1-211ENST00000533727 RTL6Q6ICC9 239 aa10.39□□□□□ -0.75
AMBRA1-211ENST00000533727 MKXQ8IYA7 352 aa10.39□□□□□ -0.75
AMBRA1-211ENST00000533727 C16orf58Q96GQ5 468 aa10.39□□□□□ -0.75
AMBRA1-211ENST00000533727 ZNF419Q96HQ0 510 aaPredicted RBP10.39□□□□□ -0.75
AMBRA1-211ENST00000533727 LAT2Q9GZY6 243 aa10.39□□□□□ -0.75
AMBRA1-211ENST00000533727 OR51J1Q9H342 316 aa10.39□□□□□ -0.75
AMBRA1-211ENST00000533727 CALHM2Q9HA72 323 aa10.39□□□□□ -0.75
AMBRA1-211ENST00000533727 ASF1BQ9NVP2 202 aa10.39□□□□□ -0.75
AMBRA1-211ENST00000533727 hCG_1809904A0A1W2PP81 198 aa10.39□□□□□ -0.75
AMBRA1-211ENST00000533727 A0A1W2PPE2 198 aa10.39□□□□□ -0.75
AMBRA1-211ENST00000533727 A0A1W2PR64 198 aa10.39□□□□□ -0.75
AMBRA1-211ENST00000533727 A0A1W2PRV1 198 aa10.39□□□□□ -0.75
AMBRA1-211ENST00000533727 OR2A25A4D2G3 310 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms